Gene: Rtl3 (retrotransposon Gag like 3) Rattus norvegicus
Analyze
Symbol: Rtl3
Name: retrotransposon Gag like 3
Description: ASSOCIATED WITH autistic disorder (ortholog); Phosphoglycerate Kinase 1 Deficiency (ortholog); INTERACTS WITH bisphenol A; (-)-epigallocatechin 3-gallate (ortholog); 17beta-estradiol (ortholog)
AGR Description: Orthologous to human RTL3 (retrotransposon Gag like 3).
Merged Description: Orthologous to human RTL3 (retrotransposon Gag like 3); INTERACTS WITH bisphenol A; (-)-epigallocatechin 3-gallate (ortholog); 17beta-estradiol (ortholog).
Type: protein-coding
RefSeq Status: MODEL
Also known as: LOC317221; RGD1564805; similar to Hypothetical protein D430021I08; Zcchc5; zinc finger CCHC domain-containing protein 5; zinc finger CCHC-type containing 5; zinc finger, CCHC domain containing 5
Orthologs:
Homo sapiens (human) : RTL3 (retrotransposon Gag like 3)  HGNC  Alliance
Mus musculus (house mouse) : Rtl3 (retrotransposon Gag like 3)  MGI  Alliance
Pan paniscus (bonobo/pygmy chimpanzee) : RTL3 (retrotransposon Gag like 3)
Canis lupus familiaris (dog) : RTL3 (retrotransposon Gag like 3)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Rtl3 (retrotransposon Gag like 3)
Sus scrofa (pig) : RTL3 (retrotransposon Gag like 3)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.0X77,953,574 - 77,957,261 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.0X78,149,884 - 78,153,576 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4X95,091,549 - 95,093,417 (-)NCBIRGSC3.4rn4RGSC3.4
CeleraX73,247,794 - 73,251,481 (-)NCBICelera
Cytogenetic MapXq22NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
References - curated
RGD Disease Portals

Genomics

Comparative Map Data
QTLs in Region (Rnor_6.0)

Sequence

Nucleotide Sequences
Protein Sequences

Strain Variation

Strain Sequence Variants (Rnor 5.0)

Additional Information

External Database Links
Nomenclature History
 
More on Rtl3
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 1564805
Created: 2006-02-09
Species: Rattus norvegicus
Last Modified: 2019-04-12
Status: ACTIVE



NHLBI Logo

RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.