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Gene: Rtl3 (retrotransposon Gag like 3) Rattus norvegicus
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Symbol: Rtl3
Name: retrotransposon Gag like 3
Description: Predicted to have nucleic acid binding activity and zinc ion binding activity. Orthologous to human RTL3 (retrotransposon Gag like 3); INTERACTS WITH bisphenol A; rotenone; (-)-epigallocatechin 3-gallate (ortholog).
Type: protein-coding
RefSeq Status: MODEL
Also known as: LOC317221; RGD1564805; similar to Hypothetical protein D430021I08; Zcchc5; zinc finger CCHC domain-containing protein 5; zinc finger CCHC-type containing 5; zinc finger, CCHC domain containing 5
Orthologs:
Homo sapiens (human) : RTL3 (retrotransposon Gag like 3)  HGNC  Alliance
Mus musculus (house mouse) : Rtl3 (retrotransposon Gag like 3)  MGI  Alliance
Pan paniscus (bonobo/pygmy chimpanzee) : RTL3 (retrotransposon Gag like 3)
Canis lupus familiaris (dog) : RTL3 (retrotransposon Gag like 3)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Rtl3 (retrotransposon Gag like 3)
Sus scrofa (pig) : RTL3 (retrotransposon Gag like 3)
Chlorocebus sabaeus (African green monkey) : RTL3 (retrotransposon Gag like 3)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.0X77,953,574 - 77,957,261 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 EnsemblX77,954,484 - 77,956,352 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0X78,149,884 - 78,153,576 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4X95,091,549 - 95,093,417 (-)NCBIRGSC3.4rn4RGSC3.4
CeleraX73,247,794 - 73,251,481 (-)NCBICelera
Cytogenetic MapXq22NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated

Genomics

Comparative Map Data
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
 
More on Rtl3
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 1564805
Created: 2006-02-09
Species: Rattus norvegicus
Last Modified: 2019-11-27
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.