Gene: Scrt2 (scratch family transcriptional repressor 2) Rattus norvegicus
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Symbol: Scrt2
Name: scratch family transcriptional repressor 2
Description: INVOLVED IN negative regulation of transcription by RNA polymerase II (ortholog); regulation of neuron migration (ortholog); FOUND IN nucleus (ortholog); INTERACTS WITH 6-propyl-2-thiouracil; bisphenol A; methamphetamine
Type: protein-coding
RefSeq Status: INFERRED
Also known as: LOC366229; RGD1564796; scratch family zinc finger 2; scratch homolog 2, zinc finger protein; scratch homolog 2, zinc finger protein (Drosophila); similar to Transcriptional repressor scratch 2 (Scratch homolog 2 zinc finger protein); transcriptional repressor scratch 2
Orthologs:
Homo sapiens (human) : SCRT2 (scratch family transcriptional repressor 2)  HGNC  Alliance
Mus musculus (house mouse) : Scrt2 (scratch family zinc finger 2)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Scrt2 (scratch family transcriptional repressor 2)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Scrt2 (scratch family transcriptional repressor 2)
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Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.03147,585,947 - 147,602,343 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.03153,934,774 - 153,946,926 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.43142,434,272 - 142,445,984 (+)NCBIRGSC3.4rn4RGSC3.4
Celera3139,334,894 - 139,345,992 (+)NCBICelera
Cytogenetic Map3q41NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated
RGD Disease Portals

Genomics

Comparative Map Data
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 5.0)
Damaging Variants

Additional Information

External Database Links
Nomenclature History
 
More on Scrt2
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 1564796
Created: 2006-02-09
Species: Rattus norvegicus
Last Modified: 2018-10-09
Status: ACTIVE