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Gene: Syt16 (synaptotagmin 16) Rattus norvegicus
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Symbol: Syt16
Name: synaptotagmin 16
Description: Predicted to have phospholipid binding activity; protein heterodimerization activity; and protein homodimerization activity. Predicted to be involved in exocytosis. Orthologous to human SYT16 (synaptotagmin 16); INTERACTS WITH 17beta-estradiol; 6-propyl-2-thiouracil; bisphenol A.
Type: protein-coding
RefSeq Status: MODEL
Also known as: LOC299142; RGD1564654; similar to synaptotagmin XIV-related protein Strep14; synaptotagmin XVI; synaptotagmin-16
Orthologs:
Homo sapiens (human) : SYT16 (synaptotagmin 16)  HGNC  Alliance
Mus musculus (house mouse) : Syt16 (synaptotagmin XVI)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Syt16 (synaptotagmin 16)
Pan paniscus (bonobo/pygmy chimpanzee) : SYT16 (synaptotagmin 16)
Canis lupus familiaris (dog) : SYT16 (synaptotagmin 16)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Syt16 (synaptotagmin 16)
Sus scrofa (pig) : SYT16 (synaptotagmin 16)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.0697,076,304 - 97,199,856 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl697,110,158 - 97,198,899 (+)Ensembl
Rnor_5.06106,340,012 - 106,466,441 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
Rnor_5.06106,536,889 - 106,630,139 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4696,684,622 - 96,774,478 (+)NCBIRGSC3.4rn4RGSC3.4
Celera691,177,534 - 91,427,252 (+)NCBICelera
Cytogenetic Map6q24NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome

Strain Variation

Strain Sequence Variants (Rnor 6.0)
Damaging Variants

Additional Information

External Database Links
Nomenclature History
 
More on Syt16
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 1564654
Created: 2006-02-09
Species: Rattus norvegicus
Last Modified: 2019-08-20
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.