Gene: Shisa6 (shisa family member 6) Rattus norvegicus
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Symbol: Shisa6
Name: shisa family member 6
Description: ENCODES a protein that exhibits ionotropic glutamate receptor binding (ortholog); PDZ domain binding (ortholog); INVOLVED IN excitatory chemical synaptic transmission (ortholog); negative regulation of canonical Wnt signaling pathway (ortholog); postsynaptic neurotransmitter receptor diffusion trapping (ortholog); FOUND IN AMPA glutamate receptor complex (ortholog); asymmetric, glutamatergic, excitatory synapse (ortholog); glutamatergic synapse (ortholog); INTERACTS WITH bisphenol A; all-trans-retinoic acid (ortholog); carbamazepine (ortholog)
Type: protein-coding
RefSeq Status: INFERRED
Also known as: LOC497926; protein shisa-6 homolog; RGD1564618; shisa homolog 6; shisa homolog 6 (Xenopus laevis); similar to novel protein
Orthologs:
Homo sapiens (human) : SHISA6 (shisa family member 6)  HGNC  Alliance
Mus musculus (house mouse) : Shisa6 (shisa family member 6)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Shisa6 (shisa family member 6)
Pan paniscus (bonobo/pygmy chimpanzee) : SHISA6 (shisa family member 6)
Canis lupus familiaris (dog) : SHISA6 (shisa family member 6)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : LOC101959444 (protein shisa-6 homolog)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.01052,744,069 - 53,037,853 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.01052,498,328 - 52,791,670 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41052,896,362 - 53,190,809 (-)NCBIRGSC3.4rn4RGSC3.4
Celera1050,092,476 - 50,378,235 (-)NCBICelera
Cytogenetic Map10q24NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


References - curated
References - uncurated
RGD Disease Portals

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome

Strain Variation

Strain Sequence Variants (Rnor 5.0)
Damaging Variants

Additional Information

External Database Links
Nomenclature History
 
More on Shisa6
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 1564618
Created: 2006-02-09
Species: Rattus norvegicus
Last Modified: 2018-10-09
Status: ACTIVE