Plekha6 (pleckstrin homology domain containing A6) - Rat Genome Database

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Gene: Plekha6 (pleckstrin homology domain containing A6) Rattus norvegicus
Analyze
Symbol: Plekha6
Name: pleckstrin homology domain containing A6
RGD ID: 1564395
Description: Orthologous to human PLEKHA6 (pleckstrin homology domain containing A6); INTERACTS WITH 17beta-estradiol; 2,3,7,8-tetrachlorodibenzodioxine; 2,4-dinitrotoluene.
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: LOC103690089; LOC360842; pleckstrin homology domain containing, family A member 6; pleckstrin homology domain-containing family A member 6; pleckstrin homology domain-containing family A member 6-like; RGD1564395; similar to Pleckstrin homology domain containing, family A member 6
RGD Orthologs
Human
Mouse
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Candidate Gene For: Bp395
Latest Assembly: mRatBN7.2 - mRatBN7.2 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81347,166,899 - 47,307,003 (+)NCBIGRCr8
mRatBN7.21344,614,740 - 44,754,951 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1344,615,011 - 44,754,673 (+)EnsemblmRatBN7.2 Ensembl
Rnor_6.01350,555,454 - 50,582,236 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1350,555,454 - 50,578,720 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01355,608,313 - 55,635,944 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
Rnor_5.01355,038,342 - 55,151,469 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41346,078,783 - 46,214,550 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
Celera1344,948,394 - 45,087,856 (+)NCBICelera
Cytogenetic Map13q13NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
(1->4)-beta-D-glucan  (ISO)
1,2-dimethylhydrazine  (ISO)
17beta-estradiol  (EXP,ISO)
2,2',4,4',5,5'-hexachlorobiphenyl  (ISO)
2,2',5,5'-tetrachlorobiphenyl  (ISO)
2,3,7,8-tetrachlorodibenzodioxine  (EXP,ISO)
2,4-dinitrotoluene  (EXP)
3,3',4,4',5-pentachlorobiphenyl  (EXP)
3,3',5,5'-tetrabromobisphenol A  (ISO)
3-methylcholanthrene  (ISO)
4,4'-sulfonyldiphenol  (ISO)
4-amino-2,6-dinitrotoluene  (EXP)
4-hydroxyphenyl retinamide  (ISO)
all-trans-retinoic acid  (ISO)
aristolochic acid A  (ISO)
arsane  (ISO)
arsenic atom  (ISO)
arsenite(3-)  (ISO)
arsenous acid  (ISO)
atrazine  (ISO)
benzo[a]pyrene  (ISO)
bisphenol A  (EXP,ISO)
buta-1,3-diene  (ISO)
butanal  (ISO)
cadmium dichloride  (ISO)
caffeine  (ISO)
calcitriol  (ISO)
carbamazepine  (ISO)
carbon nanotube  (ISO)
CGP 52608  (ISO)
chloroprene  (ISO)
cisplatin  (ISO)
copper(II) chloride  (ISO)
copper(II) sulfate  (ISO)
Cuprizon  (EXP)
cyclosporin A  (ISO)
deoxynivalenol  (ISO)
diarsenic trioxide  (ISO)
dibutyl phthalate  (EXP)
dicrotophos  (ISO)
diuron  (EXP)
epoxiconazole  (ISO)
ethanol  (ISO)
flutamide  (EXP)
folic acid  (ISO)
hydrogen peroxide  (ISO)
inulin  (ISO)
lithium chloride  (ISO)
menadione  (ISO)
methamphetamine  (ISO)
N-benzyloxycarbonyl-L-leucyl-L-leucyl-L-leucinal  (ISO)
nickel atom  (ISO)
ozone  (ISO)
paracetamol  (ISO)
paraquat  (EXP)
PCB138  (ISO)
perfluorooctane-1-sulfonic acid  (ISO)
phenobarbital  (ISO)
propanal  (ISO)
quercetin  (ISO)
S-(1,2-dichlorovinyl)-L-cysteine  (ISO)
silicon dioxide  (ISO)
sodium arsenate  (ISO)
sodium arsenite  (ISO)
sunitinib  (ISO)
testosterone  (ISO)
tetrachloromethane  (ISO)
Theaflavin 3,3'-digallate  (ISO)
thimerosal  (ISO)
thiram  (ISO)
titanium dioxide  (ISO)
triclosan  (ISO)
trimellitic anhydride  (ISO)
valproic acid  (EXP,ISO)
vorinostat  (ISO)

Gene Ontology Annotations     Click to see Annotation Detail View

Molecular Function

Phenotype Annotations     Click to see Annotation Detail View

Mammalian Phenotype
References

References - curated
# Reference Title Reference Citation
1. Congenic mapping and sequence analysis of the Renin locus. Flister MJ, etal., Hypertension. 2013 Apr;61(4):850-6. doi: 10.1161/HYPERTENSIONAHA.111.01008. Epub 2013 Mar 4.
2. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
3. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions

Genomics

Comparative Map Data
Plekha6
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81347,166,899 - 47,307,003 (+)NCBIGRCr8
mRatBN7.21344,614,740 - 44,754,951 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1344,615,011 - 44,754,673 (+)EnsemblmRatBN7.2 Ensembl
Rnor_6.01350,555,454 - 50,582,236 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1350,555,454 - 50,578,720 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01355,608,313 - 55,635,944 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
Rnor_5.01355,038,342 - 55,151,469 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41346,078,783 - 46,214,550 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
Celera1344,948,394 - 45,087,856 (+)NCBICelera
Cytogenetic Map13q13NCBI
PLEKHA6
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381204,218,853 - 204,378,168 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1204,218,853 - 204,378,214 (-)EnsemblGRCh38hg38GRCh38
GRCh371204,187,981 - 204,329,057 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 361202,454,604 - 202,595,667 (-)NCBINCBI36Build 36hg18NCBI36
Build 341200,919,638 - 201,060,701NCBI
Celera1177,323,436 - 177,464,478 (-)NCBICelera
Cytogenetic Map1q32.1NCBI
HuRef1175,352,932 - 175,494,004 (-)NCBIHuRef
CHM1_11205,611,887 - 205,752,926 (-)NCBICHM1_1
T2T-CHM13v2.01203,483,437 - 203,642,952 (-)NCBIT2T-CHM13v2.0
Plekha6
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391133,089,770 - 133,231,173 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1133,091,948 - 133,231,173 (+)EnsemblGRCm39 Ensembl
GRCm381133,162,032 - 133,303,435 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1133,164,210 - 133,303,435 (+)EnsemblGRCm38mm10GRCm38
MGSCv371135,142,674 - 135,200,012 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361135,073,652 - 135,129,195 (+)NCBIMGSCv36mm8
Celera1135,858,572 - 135,915,993 (+)NCBICelera
Cytogenetic Map1E4NCBI
cM Map157.91NCBI
Plekha6
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495540640,066,206 - 40,134,597 (-)EnsemblChiLan1.0
ChiLan1.0NW_00495540640,066,260 - 40,200,629 (-)NCBIChiLan1.0ChiLan1.0
PLEKHA6
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2144,998,411 - 45,156,233 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1144,963,871 - 45,121,490 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01179,821,249 - 179,980,149 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11184,109,553 - 184,268,475 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1184,109,553 - 184,164,492 (-)Ensemblpanpan1.1panPan2
PLEKHA6
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.138795,368 - 851,823 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl38799,918 - 838,835 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha38890,782 - 1,030,906 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.038790,756 - 911,549 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl38790,758 - 932,400 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.138787,199 - 908,048 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0381,178,604 - 1,299,615 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0381,378,805 - 1,519,290 (-)NCBIUU_Cfam_GSD_1.0
Plekha6
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440934471,192,620 - 71,329,810 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_004936567515,854 - 564,448 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_004936567430,383 - 564,429 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
PLEKHA6
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl964,874,046 - 65,003,248 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1964,876,803 - 65,027,455 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2971,197,101 - 71,363,068 (-)NCBISscrofa10.2Sscrofa10.2susScr3
PLEKHA6
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.12524,973,035 - 25,130,439 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl2525,000,340 - 25,130,573 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366605525,733,394 - 25,891,098 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Plekha6
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046248076,712,883 - 6,784,620 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046248076,653,383 - 6,784,287 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in Plekha6
739 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:228
Count of miRNA genes:84
Interacting mature miRNAs:92
Transcripts:ENSRNOT00000046522, ENSRNOT00000060807
Prediction methods:Microtar, Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (mRatBN7.2)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
10755495Bp387Blood pressure QTL 3873.78arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)133466346187525369Rat
9589141Insul28Insulin level QTL 2810.820.001blood insulin amount (VT:0001560)plasma insulin level (CMO:0000342)13931346554313465Rat
12879436Bp395Blood pressure QTL 395arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)134463918245700190Rat
6893344Cm79Cardiac mass QTL 791.50.04heart mass (VT:0007028)heart weight to body weight ratio (CMO:0000074)134372077062022792Rat
70220Bp55Blood pressure QTL 555.75arterial blood pressure trait (VT:2000000)blood pressure measurement (CMO:0000003)133737450982374509Rat
61391Bp5Blood pressure QTL 55.6arterial blood pressure trait (VT:2000000)diastolic blood pressure (CMO:0000005)132230187567301875Rat
4889861Pur29Proteinuria QTL 2913.80.005urine total protein amount (VT:0000032)urine total protein excretion rate (CMO:0000756)133741558480753406Rat
1300163Cardf1Cardiac cell morphology QTL 14.18aorta morphology trait (VT:0000272)artery lesion measurement (CMO:0000975)131192944945417941Rat
2317040Aia21Adjuvant induced arthritis QTL 212.75joint integrity trait (VT:0010548)left rear ankle joint diameter (CMO:0002149)13983154154831541Rat
631645Bp121Blood pressure QTL 1213.3arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)131491565559915655Rat
2317046Aia8Adjuvant induced arthritis QTL 83.9700000286102295joint integrity trait (VT:0010548)left rear ankle joint diameter (CMO:0002149)13983154154831541Rat
619615Bp80Blood pressure QTL 800.0354arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)133975454484754544Rat
1581570Eae17Experimental allergic encephalomyelitis QTL 174.1nervous system integrity trait (VT:0010566)experimental autoimmune encephalomyelitis incidence/prevalence measurement (CMO:0001046)138897350101631289Rat
61339Bp24Blood pressure QTL 240.05arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)13599466844807491Rat
70170Eae14Experimental allergic encephalomyelitis QTL 140.0024nervous system integrity trait (VT:0010566)experimental autoimmune encephalomyelitis incidence/prevalence measurement (CMO:0001046)132320344868203448Rat
2303032Bp328Blood pressure QTL 328arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)134118402245417941Rat
1331784Bp222Blood pressure QTL 2222.944arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)131769443653050594Rat
61340Bp25Blood pressure QTL 254.20.004arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)133453521879535218Rat
1581573Uae36Urinary albumin excretion QTL 36urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)13599483377046787Rat
1549897Stresp12Stress response QTL 123.35stress-related behavior trait (VT:0010451)number of approaches toward negative stimulus before onset of defensive burying response (CMO:0001960)133843340883433408Rat
2302275Gluco37Glucose level QTL 373.8blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)131192944946193066Rat
7207885Glom27Glomerulus QTL 273.9kidney glomerulus integrity trait (VT:0010546)kidney crescentic glomeruli count to kidney normal glomeruli count ratio (CMO:0002139)1320605871101339738Rat
4145117Mcs27Mammary carcinoma susceptibility QTL 270.0001mammary gland integrity trait (VT:0010552)post-insult time to mammary tumor formation (CMO:0000345)134343790447841255Rat
1558644Cm45Cardiac mass QTL 453.60.002heart mass (VT:0007028)heart wet weight (CMO:0000069)132369296968692969Rat
70181BpQTLcluster11Blood pressure QTL cluster 116.922arterial blood pressure trait (VT:2000000)absolute change in mean arterial blood pressure (CMO:0000533)133124133193395974Rat
61349Bp31Blood pressure QTL 315.75arterial blood pressure trait (VT:2000000)blood pressure measurement (CMO:0000003)133737450982374509Rat
2303563Bw89Body weight QTL 896body mass (VT:0001259)body weight (CMO:0000012)133228447177284471Rat
1354621Rf47Renal function QTL 473.7kidney renin amount (VT:0010559)kidney renin level (CMO:0002166)1330395351101056920Rat
2301962Cm72Cardiac mass QTL 724.12heart left ventricle mass (VT:0007031)heart left ventricle weight (CMO:0000776)133124133158363171Rat
1581554Pur11Proteinuria QTL 11urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)13599483377046787Rat
12879477Bp401Blood pressure QTL 401arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)133726209282262092Rat
1331750Bp220Blood pressure QTL 2202.98arterial blood pressure trait (VT:2000000)diastolic blood pressure (CMO:0000005)133741558482415584Rat
6893338Cm76Cardiac mass QTL 7600.99heart mass (VT:0007028)heart weight to body weight ratio (CMO:0000074)132369296968692969Rat
1354666Bp244Blood pressure QTL 2444.9arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)131101056920Rat
9589164Gluco66Glucose level QTL 666.670.001blood glucose amount (VT:0000188)plasma glucose level (CMO:0000042)131515872260158722Rat
7411662Foco29Food consumption QTL 2920.80.001eating behavior trait (VT:0001431)feed conversion ratio (CMO:0001312)13931346554313465Rat

Markers in Region
D13Hmgc90  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21344,624,505 - 44,624,768 (+)MAPPERmRatBN7.2
mRatBN7.21344,624,568 - 44,624,768 (+)MAPPERmRatBN7.2
Rnor_6.01349,980,013 - 49,980,295NCBIRnor6.0
Rnor_6.01349,980,096 - 49,980,295NCBIRnor6.0
Rnor_5.01355,048,445 - 55,048,644UniSTSRnor5.0
Rnor_5.01355,048,362 - 55,048,644UniSTSRnor5.0
RGSC_v3.41346,088,424 - 46,088,623UniSTSRGSC3.4
Celera1344,958,127 - 44,958,195UniSTS
Cytogenetic Map13q13UniSTS
D13Hmgc84  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21344,639,182 - 44,639,436 (+)MAPPERmRatBN7.2
Rnor_6.01349,994,708 - 49,994,961NCBIRnor6.0
Rnor_5.01355,063,057 - 55,063,310UniSTSRnor5.0
RGSC_v3.41346,103,036 - 46,103,289UniSTSRGSC3.4
Celera1344,972,608 - 44,972,861UniSTS
Cytogenetic Map13q13UniSTS
RH134546  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21344,754,726 - 44,754,911 (-)MAPPERmRatBN7.2
Rnor_6.01350,555,494 - 50,555,678NCBIRnor6.0
Rnor_5.01355,608,353 - 55,608,537UniSTSRnor5.0
RGSC_v3.41346,218,710 - 46,218,894UniSTSRGSC3.4
Celera1345,087,632 - 45,087,816UniSTS
RH 3.4 Map13198.8UniSTS
Cytogenetic Map13q13UniSTS
RH143196  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21344,697,271 - 44,697,427 (+)MAPPERmRatBN7.2
Rnor_6.01350,052,462 - 50,052,617NCBIRnor6.0
Rnor_5.01355,120,682 - 55,120,837UniSTSRnor5.0
RGSC_v3.41346,161,143 - 46,161,298UniSTSRGSC3.4
Celera1345,030,547 - 45,030,702UniSTS
RH 3.4 Map13182.8UniSTS
Cytogenetic Map13q13UniSTS
BF392626  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21344,694,639 - 44,694,745 (+)MAPPERmRatBN7.2
Rnor_6.01350,049,822 - 50,049,927NCBIRnor6.0
Rnor_5.01355,118,241 - 55,118,346UniSTSRnor5.0
RGSC_v3.41346,158,334 - 46,158,439UniSTSRGSC3.4
Celera1345,027,915 - 45,028,020UniSTS
RH 3.4 Map13199.9UniSTS
Cytogenetic Map13q13UniSTS
AU046875  
Rat AssemblyChrPosition (strand)SourceJBrowse
Rnor_6.01350,030,461 - 50,030,568NCBIRnor6.0
Rnor_5.01355,098,801 - 55,098,908UniSTSRnor5.0
RGSC_v3.41346,138,894 - 46,139,001UniSTSRGSC3.4
Celera1345,008,399 - 45,008,506UniSTS
Cytogenetic Map13q13UniSTS
RH141720  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21344,752,495 - 44,752,706 (-)MAPPERmRatBN7.2
Rnor_6.01350,557,699 - 50,557,909NCBIRnor6.0
Rnor_5.01355,610,558 - 55,610,768UniSTSRnor5.0
RGSC_v3.41346,216,479 - 46,216,689UniSTSRGSC3.4
Celera1345,085,401 - 45,085,611UniSTS
Cytogenetic Map13q13UniSTS
BE119883  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21344,715,226 - 44,715,426 (+)MAPPERmRatBN7.2
Rnor_6.01350,070,674 - 50,070,873NCBIRnor6.0
Rnor_5.01355,138,894 - 55,139,093UniSTSRnor5.0
RGSC_v3.41346,179,472 - 46,179,671UniSTSRGSC3.4
Celera1345,048,512 - 45,048,711UniSTS
RH 3.4 Map13173.4UniSTS
Cytogenetic Map13q13UniSTS


Expression

RNA-SEQ Expression

alimentary part of gastrointestinal system
appendage
circulatory system
ectoderm
endocrine system
endoderm
exocrine system
hemolymphoid system
hepatobiliary system
integumental system
mesenchyme
mesoderm
nervous system
renal system
reproductive system
respiratory system
9 11 49 113 91 90 59 25 59 6 218 97 93 45 60 31

Sequence

Nucleotide Sequences
RefSeq Transcripts NM_001427839 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006221473 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006221474 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006249816 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006249818 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017604601 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017604602 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017604603 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017604604 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017604605 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017604606 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017604607 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017604608 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017604609 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017604610 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017604611 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017604612 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017604613 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017604614 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017604615 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017604616 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017604617 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039091292 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039091294 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039091295 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039091296 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039091302 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039091303 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039091306 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039091307 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039091308 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039091309 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063272439 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063272440 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063272441 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063272442 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063272443 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063272444 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063272445 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063272446 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063272447 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063272448 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063272449 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063272450 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063272451 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063272452 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063272453 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063272454 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063272455 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063272457 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063272458 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063272459 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063272460 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063272461 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063272462 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063272463 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_341118 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide CH473958 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAXUCZ010000013 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Ensembl Acc Id: ENSRNOT00000076153
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
Rnor_6.0 Ensembl1350,559,134 - 50,560,204 (-)Ensembl
Ensembl Acc Id: ENSRNOT00000076242
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
Rnor_6.0 Ensembl1350,558,753 - 50,564,219 (-)Ensembl
Ensembl Acc Id: ENSRNOT00000077066
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl1344,631,514 - 44,754,673 (+)Ensembl
Rnor_6.0 Ensembl1350,555,454 - 50,578,720 (-)Ensembl
Ensembl Acc Id: ENSRNOT00000100205   ⟹   ENSRNOP00000093888
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl1344,615,011 - 44,753,150 (+)Ensembl
Ensembl Acc Id: ENSRNOT00000103956   ⟹   ENSRNOP00000091605
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl1344,707,052 - 44,753,150 (+)Ensembl
Ensembl Acc Id: ENSRNOT00000107878   ⟹   ENSRNOP00000093717
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl1344,631,514 - 44,754,673 (+)Ensembl
RefSeq Acc Id: NM_001427839   ⟹   NP_001414768
RefSeq Status: VALIDATED
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81347,183,409 - 47,307,003 (+)NCBI
RefSeq Acc Id: XM_039091292   ⟹   XP_038947220
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81347,166,899 - 47,302,484 (+)NCBI
mRatBN7.21344,614,740 - 44,754,951 (+)NCBI
RefSeq Acc Id: XM_039091294   ⟹   XP_038947222
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81347,201,812 - 47,302,626 (+)NCBI
mRatBN7.21344,653,779 - 44,754,951 (+)NCBI
RefSeq Acc Id: XM_039091295   ⟹   XP_038947223
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81347,201,812 - 47,307,003 (+)NCBI
mRatBN7.21344,653,776 - 44,754,951 (+)NCBI
RefSeq Acc Id: XM_039091296   ⟹   XP_038947224
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81347,166,899 - 47,302,484 (+)NCBI
mRatBN7.21344,614,741 - 44,754,951 (+)NCBI
RefSeq Acc Id: XM_039091302   ⟹   XP_038947230
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81347,201,812 - 47,302,484 (+)NCBI
mRatBN7.21344,653,780 - 44,754,951 (+)NCBI
RefSeq Acc Id: XM_039091303   ⟹   XP_038947231
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81347,259,677 - 47,302,484 (+)NCBI
mRatBN7.21344,699,350 - 44,754,951 (+)NCBI
RefSeq Acc Id: XM_039091306   ⟹   XP_038947234
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81347,201,812 - 47,302,484 (+)NCBI
mRatBN7.21344,653,781 - 44,754,951 (+)NCBI
RefSeq Acc Id: XM_039091307   ⟹   XP_038947235
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81347,183,428 - 47,302,484 (+)NCBI
mRatBN7.21344,631,348 - 44,754,951 (+)NCBI
RefSeq Acc Id: XM_039091308   ⟹   XP_038947236
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81347,229,325 - 47,302,484 (+)NCBI
mRatBN7.21344,677,270 - 44,754,951 (+)NCBI
RefSeq Acc Id: XM_039091309   ⟹   XP_038947237
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81347,244,098 - 47,302,484 (+)NCBI
mRatBN7.21344,689,802 - 44,754,951 (+)NCBI
RefSeq Acc Id: XM_063272439   ⟹   XP_063128509
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81347,201,812 - 47,302,484 (+)NCBI
RefSeq Acc Id: XM_063272440   ⟹   XP_063128510
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81347,201,812 - 47,302,626 (+)NCBI
RefSeq Acc Id: XM_063272441   ⟹   XP_063128511
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81347,201,812 - 47,302,484 (+)NCBI
RefSeq Acc Id: XM_063272442   ⟹   XP_063128512
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81347,201,812 - 47,302,484 (+)NCBI
RefSeq Acc Id: XM_063272443   ⟹   XP_063128513
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81347,201,812 - 47,302,484 (+)NCBI
RefSeq Acc Id: XM_063272444   ⟹   XP_063128514
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81347,201,812 - 47,307,003 (+)NCBI
RefSeq Acc Id: XM_063272445   ⟹   XP_063128515
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81347,201,812 - 47,302,484 (+)NCBI
RefSeq Acc Id: XM_063272446   ⟹   XP_063128516
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81347,201,812 - 47,302,484 (+)NCBI
RefSeq Acc Id: XM_063272447   ⟹   XP_063128517
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81347,201,812 - 47,302,484 (+)NCBI
RefSeq Acc Id: XM_063272448   ⟹   XP_063128518
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81347,201,812 - 47,302,484 (+)NCBI
RefSeq Acc Id: XM_063272449   ⟹   XP_063128519
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81347,201,812 - 47,302,626 (+)NCBI
RefSeq Acc Id: XM_063272450   ⟹   XP_063128520
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81347,201,812 - 47,302,484 (+)NCBI
RefSeq Acc Id: XM_063272451   ⟹   XP_063128521
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81347,201,812 - 47,298,331 (+)NCBI
RefSeq Acc Id: XM_063272452   ⟹   XP_063128522
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81347,201,812 - 47,302,484 (+)NCBI
RefSeq Acc Id: XM_063272453   ⟹   XP_063128523
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81347,201,812 - 47,307,003 (+)NCBI
RefSeq Acc Id: XM_063272454   ⟹   XP_063128524
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81347,238,900 - 47,302,484 (+)NCBI
RefSeq Acc Id: XM_063272455   ⟹   XP_063128525
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81347,201,812 - 47,302,484 (+)NCBI
RefSeq Acc Id: XM_063272457   ⟹   XP_063128527
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81347,201,812 - 47,302,626 (+)NCBI
RefSeq Acc Id: XM_063272458   ⟹   XP_063128528
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81347,238,900 - 47,307,003 (+)NCBI
RefSeq Acc Id: XM_063272459   ⟹   XP_063128529
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81347,259,677 - 47,302,484 (+)NCBI
RefSeq Acc Id: XM_063272460   ⟹   XP_063128530
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81347,201,812 - 47,302,484 (+)NCBI
RefSeq Acc Id: XM_063272461   ⟹   XP_063128531
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81347,201,812 - 47,302,626 (+)NCBI
RefSeq Acc Id: XM_063272462   ⟹   XP_063128532
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81347,201,812 - 47,307,003 (+)NCBI
RefSeq Acc Id: XM_063272463   ⟹   XP_063128533
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81347,201,812 - 47,307,003 (+)NCBI
RefSeq Acc Id: XM_341118   ⟹   XP_341119
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81347,273,282 - 47,302,484 (+)NCBI
mRatBN7.21344,721,260 - 44,754,951 (+)NCBI
Rnor_6.01350,555,454 - 50,582,236 (-)NCBI
Rnor_5.01355,608,313 - 55,635,944 (-)NCBI
RGSC_v3.41346,078,783 - 46,214,550 (+)RGD
Sequence:
Protein Sequences
Protein RefSeqs NP_001414768 (Get FASTA)   NCBI Sequence Viewer  
  XP_038947220 (Get FASTA)   NCBI Sequence Viewer  
  XP_038947222 (Get FASTA)   NCBI Sequence Viewer  
  XP_038947223 (Get FASTA)   NCBI Sequence Viewer  
  XP_038947224 (Get FASTA)   NCBI Sequence Viewer  
  XP_038947230 (Get FASTA)   NCBI Sequence Viewer  
  XP_038947231 (Get FASTA)   NCBI Sequence Viewer  
  XP_038947234 (Get FASTA)   NCBI Sequence Viewer  
  XP_038947235 (Get FASTA)   NCBI Sequence Viewer  
  XP_038947236 (Get FASTA)   NCBI Sequence Viewer  
  XP_038947237 (Get FASTA)   NCBI Sequence Viewer  
  XP_063128509 (Get FASTA)   NCBI Sequence Viewer  
  XP_063128510 (Get FASTA)   NCBI Sequence Viewer  
  XP_063128511 (Get FASTA)   NCBI Sequence Viewer  
  XP_063128512 (Get FASTA)   NCBI Sequence Viewer  
  XP_063128513 (Get FASTA)   NCBI Sequence Viewer  
  XP_063128514 (Get FASTA)   NCBI Sequence Viewer  
  XP_063128515 (Get FASTA)   NCBI Sequence Viewer  
  XP_063128516 (Get FASTA)   NCBI Sequence Viewer  
  XP_063128517 (Get FASTA)   NCBI Sequence Viewer  
  XP_063128518 (Get FASTA)   NCBI Sequence Viewer  
  XP_063128519 (Get FASTA)   NCBI Sequence Viewer  
  XP_063128520 (Get FASTA)   NCBI Sequence Viewer  
  XP_063128521 (Get FASTA)   NCBI Sequence Viewer  
  XP_063128522 (Get FASTA)   NCBI Sequence Viewer  
  XP_063128523 (Get FASTA)   NCBI Sequence Viewer  
  XP_063128524 (Get FASTA)   NCBI Sequence Viewer  
  XP_063128525 (Get FASTA)   NCBI Sequence Viewer  
  XP_063128527 (Get FASTA)   NCBI Sequence Viewer  
  XP_063128528 (Get FASTA)   NCBI Sequence Viewer  
  XP_063128529 (Get FASTA)   NCBI Sequence Viewer  
  XP_063128530 (Get FASTA)   NCBI Sequence Viewer  
  XP_063128531 (Get FASTA)   NCBI Sequence Viewer  
  XP_063128532 (Get FASTA)   NCBI Sequence Viewer  
  XP_063128533 (Get FASTA)   NCBI Sequence Viewer  
  XP_341119 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein EDM09776 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSRNOP00000082734.1
  ENSRNOP00000091605.1
  ENSRNOP00000093717.1
  ENSRNOP00000093888.1
RefSeq Acc Id: XP_341119   ⟸   XM_341118
- Peptide Label: isoform X32
- Sequence:
RefSeq Acc Id: XP_038947220   ⟸   XM_039091292
- Peptide Label: isoform X3
RefSeq Acc Id: XP_038947224   ⟸   XM_039091296
- Peptide Label: isoform X8
RefSeq Acc Id: XP_038947235   ⟸   XM_039091307
- Peptide Label: isoform X23
RefSeq Acc Id: XP_038947223   ⟸   XM_039091295
- Peptide Label: isoform X7
- UniProtKB: A0A8I6AI30 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038947222   ⟸   XM_039091294
- Peptide Label: isoform X6
- UniProtKB: A0A8I6AI30 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038947230   ⟸   XM_039091302
- Peptide Label: isoform X15
RefSeq Acc Id: XP_038947234   ⟸   XM_039091306
- Peptide Label: isoform X22
RefSeq Acc Id: XP_038947236   ⟸   XM_039091308
- Peptide Label: isoform X23
RefSeq Acc Id: XP_038947237   ⟸   XM_039091309
- Peptide Label: isoform X23
RefSeq Acc Id: XP_038947231   ⟸   XM_039091303
- Peptide Label: isoform X16
Ensembl Acc Id: ENSRNOP00000093717   ⟸   ENSRNOT00000107878
Ensembl Acc Id: ENSRNOP00000091605   ⟸   ENSRNOT00000103956
Ensembl Acc Id: ENSRNOP00000093888   ⟸   ENSRNOT00000100205
RefSeq Acc Id: NP_001414768   ⟸   NM_001427839
RefSeq Acc Id: XP_063128523   ⟸   XM_063272453
- Peptide Label: isoform X21
RefSeq Acc Id: XP_063128514   ⟸   XM_063272444
- Peptide Label: isoform X10
RefSeq Acc Id: XP_063128532   ⟸   XM_063272462
- Peptide Label: isoform X30
RefSeq Acc Id: XP_063128533   ⟸   XM_063272463
- Peptide Label: isoform X31
RefSeq Acc Id: XP_063128510   ⟸   XM_063272440
- Peptide Label: isoform X2
RefSeq Acc Id: XP_063128519   ⟸   XM_063272449
- Peptide Label: isoform X17
RefSeq Acc Id: XP_063128527   ⟸   XM_063272457
- Peptide Label: isoform X25
RefSeq Acc Id: XP_063128531   ⟸   XM_063272461
- Peptide Label: isoform X29
RefSeq Acc Id: XP_063128509   ⟸   XM_063272439
- Peptide Label: isoform X1
RefSeq Acc Id: XP_063128517   ⟸   XM_063272447
- Peptide Label: isoform X13
RefSeq Acc Id: XP_063128513   ⟸   XM_063272443
- Peptide Label: isoform X9
RefSeq Acc Id: XP_063128522   ⟸   XM_063272452
- Peptide Label: isoform X20
RefSeq Acc Id: XP_063128511   ⟸   XM_063272441
- Peptide Label: isoform X4
RefSeq Acc Id: XP_063128515   ⟸   XM_063272445
- Peptide Label: isoform X11
RefSeq Acc Id: XP_063128516   ⟸   XM_063272446
- Peptide Label: isoform X12
RefSeq Acc Id: XP_063128520   ⟸   XM_063272450
- Peptide Label: isoform X18
RefSeq Acc Id: XP_063128525   ⟸   XM_063272455
- Peptide Label: isoform X24
RefSeq Acc Id: XP_063128530   ⟸   XM_063272460
- Peptide Label: isoform X28
RefSeq Acc Id: XP_063128512   ⟸   XM_063272442
- Peptide Label: isoform X5
RefSeq Acc Id: XP_063128518   ⟸   XM_063272448
- Peptide Label: isoform X14
RefSeq Acc Id: XP_063128521   ⟸   XM_063272451
- Peptide Label: isoform X19
RefSeq Acc Id: XP_063128528   ⟸   XM_063272458
- Peptide Label: isoform X26
RefSeq Acc Id: XP_063128524   ⟸   XM_063272454
- Peptide Label: isoform X23
RefSeq Acc Id: XP_063128529   ⟸   XM_063272459
- Peptide Label: isoform X27
Protein Domains
PH   WW

Transcriptome

eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen


Additional Information

Database Acc Id Source(s)
AGR Gene RGD:1564395 AgrOrtholog
BioCyc Gene G2FUF-18292 BioCyc
Ensembl Genes ENSRNOG00000002907 Ensembl, UniProtKB/TrEMBL
Ensembl Transcript ENSRNOT00000077066.2 UniProtKB/TrEMBL
  ENSRNOT00000100205.1 UniProtKB/TrEMBL
  ENSRNOT00000103956.1 UniProtKB/TrEMBL
  ENSRNOT00000107878.1 UniProtKB/TrEMBL
Gene3D-CATH 2.20.70.10 UniProtKB/TrEMBL
  2.30.29.30 UniProtKB/TrEMBL
InterPro PH-like_dom_sf UniProtKB/TrEMBL
  PH_domain UniProtKB/TrEMBL
  PKHA4-7_PH UniProtKB/TrEMBL
  WW_dom UniProtKB/TrEMBL
  WW_dom_sf UniProtKB/TrEMBL
NCBI Gene 360842 ENTREZGENE
PANTHER PHOSPHOINOSITOL 3-PHOSPHATE-BINDING PROTEIN UniProtKB/TrEMBL
  PLECKSTRIN HOMOLOGY DOMAIN-CONTAINING FAMILY A MEMBER 6 UniProtKB/TrEMBL
Pfam PF00169 UniProtKB/TrEMBL
PhenoGen Plekha6 PhenoGen
PROSITE PH_DOMAIN UniProtKB/TrEMBL
  WW_DOMAIN_1 UniProtKB/TrEMBL
  WW_DOMAIN_2 UniProtKB/TrEMBL
RatGTEx ENSRNOG00000002907 RatGTEx
SMART SM00233 UniProtKB/TrEMBL
  SM00456 UniProtKB/TrEMBL
Superfamily-SCOP PH domain-like UniProtKB/TrEMBL
  SSF51045 UniProtKB/TrEMBL
UniProt A0A8I5ZUH5_RAT UniProtKB/TrEMBL
  A0A8I6AC02_RAT UniProtKB/TrEMBL
  A0A8I6AI30 ENTREZGENE, UniProtKB/TrEMBL
  A0A8I6AKY1_RAT UniProtKB/TrEMBL
  A6IC71_RAT UniProtKB/TrEMBL


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2021-03-09 Plekha6  pleckstrin homology domain containing A6  LOC103690089  pleckstrin homology domain-containing family A member 6-like  Data merged from RGD:9185945 737654 PROVISIONAL
2015-11-30 Plekha6  pleckstrin homology domain containing A6  Plekha6  pleckstrin homology domain containing, family A member 6  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2014-08-25 LOC103690089  pleckstrin homology domain-containing family A member 6-like      Symbol and Name status set to provisional 70820 PROVISIONAL
2008-04-30 Plekha6  pleckstrin homology domain containing, family A member 6   Plekha6_predicted  pleckstrin homology domain containing, family A member 6 (predicted)  'predicted' is removed 2292626 APPROVED
2006-03-30 Plekha6_predicted  pleckstrin homology domain containing, family A member 6 (predicted)  RGD1564395_predicted  similar to Pleckstrin homology domain containing, family A member 6 (predicted)  Symbol and Name updated 1299863 APPROVED
2006-03-07 RGD1564395_predicted  similar to Pleckstrin homology domain containing, family A member 6 (predicted)  LOC360842  similar to Pleckstrin homology domain containing, family A member 6  Symbol and Name status set to approved 1299863 APPROVED
2006-02-09 LOC360842  similar to Pleckstrin homology domain containing, family A member 6      Symbol and Name status set to provisional 70820 PROVISIONAL