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Gene: Cxcl13 (C-X-C motif chemokine ligand 13) Rattus norvegicus
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Symbol: Cxcl13
Name: C-X-C motif chemokine ligand 13
Description: Predicted to have several functions, including chemokine receptor binding activity; fibroblast growth factor binding activity; and heparin binding activity. Predicted to be involved in several processes, including cell chemotaxis; regulation of chemotaxis; and response to bacterium. Predicted to localize to the extracellular space. Orthologous to human CXCL13 (C-X-C motif chemokine ligand 13); PARTICIPATES IN chemokine mediated signaling pathway; cytokine mediated signaling pathway; INTERACTS WITH 1,2-dimethylhydrazine; 1-naphthyl isothiocyanate; 2,2',4,4',5,5'-hexachlorobiphenyl.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: C-X-C motif chemokine 13; chemokine (C-X-C motif) ligand 13; LOC498335; similar to Small inducible cytokine B13 precursor (CXCL13) (B lymphocyte chemoattractant) (CXC chemokine BLC)
Orthologs:
Homo sapiens (human) : CXCL13 (C-X-C motif chemokine ligand 13)  HGNC  Alliance
Mus musculus (house mouse) : Cxcl13 (chemokine (C-X-C motif) ligand 13)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Cxcl13 (C-X-C motif chemokine ligand 13)
Pan paniscus (bonobo/pygmy chimpanzee) : CXCL13 (C-X-C motif chemokine ligand 13)
Canis lupus familiaris (dog) : CXCL13 (C-X-C motif chemokine ligand 13)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Cxcl13 (C-X-C motif chemokine ligand 13)
Sus scrofa (pig) : CXCL13 (C-X-C motif chemokine ligand 13)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.01415,253,146 - 15,258,221 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1415,253,125 - 15,258,207 (-)Ensembl
Rnor_5.01415,193,472 - 15,198,546 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41415,126,332 - 15,131,368 (-)NCBIRGSC3.4rn4RGSC3.4
Celera1413,649,303 - 13,654,347 (-)NCBICelera
Cytogenetic Map14p22NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
Molecular Pathway Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
 
More on Cxcl13
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 1564256
Created: 2006-02-09
Species: Rattus norvegicus
Last Modified: 2019-10-16
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.