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Gene: Syde2 (synapse defective Rho GTPase homolog 2) Rattus norvegicus
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Symbol: Syde2
Name: synapse defective Rho GTPase homolog 2
RGD ID: 1564206
Description: Predicted to be involved in cell migration. Orthologous to human SYDE2 (synapse defective Rho GTPase homolog 2); INTERACTS WITH (+)-schisandrin B; bisphenol A; rotenone.
Type: protein-coding
RefSeq Status: VALIDATED
Also known as: LOC308021; RGD1564206; rho GTPase-activating protein SYDE2; similar to hypothetical protein FLJ13511; Syde2-ps1; synapse defective 1, Rho GTPase, homolog 2; synapse defective 1, Rho GTPase, homolog 2 (C. elegans); synapse defective 1, Rho GTPase, homolog 2 (C. elegans), pseudogene 1; synapse defective 1, Rho GTPase, homolog 2, pseudogene 1
Orthologs:
Homo sapiens (human) : SYDE2 (synapse defective Rho GTPase homolog 2)  HGNC  Alliance
Mus musculus (house mouse) : Syde2 (synapse defective 1, Rho GTPase, homolog 2 (C. elegans))  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Syde2 (synapse defective Rho GTPase homolog 2)
Pan paniscus (bonobo/pygmy chimpanzee) : SYDE2 (synapse defective Rho GTPase homolog 2)
Canis lupus familiaris (dog) : SYDE2 (synapse defective Rho GTPase homolog 2)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Syde2 (synapse defective Rho GTPase homolog 2)
Sus scrofa (pig) : SYDE2 (synapse defective Rho GTPase homolog 2)
Chlorocebus sabaeus (African green monkey) : SYDE2 (synapse defective Rho GTPase homolog 2)
Heterocephalus glaber (naked mole-rat) : Syde2 (synapse defective Rho GTPase homolog 2)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.02251,861,900 - 251,895,524 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl2251,863,069 - 251,894,037 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.02270,385,411 - 270,419,064 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.42244,166,412 - 244,199,033 (+)NCBIRGSC3.4rn4RGSC3.4
Celera2226,880,380 - 226,913,328 (+)NCBICelera
Cytogenetic Map2q44NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome

Strain Variation

Strain Sequence Variants (Rnor 6.0)
Damaging Variants

Additional Information

External Database Links
Nomenclature History
 
More on Syde2
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 1564206
Created: 2006-02-09
Species: Rattus norvegicus
Last Modified: 2020-09-09
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.