Submit Data |  Help |  Video Tutorials |  News |  Publications |  FTP Download |  REST API |  Citing RGD |  Contact   
Gene: Borcs6 (BLOC-1 related complex subunit 6) Rattus norvegicus
Analyze
Symbol: Borcs6
Name: BLOC-1 related complex subunit 6
Description: Predicted to be involved in lysosome localization. Predicted to localize to the BORC complex. Orthologous to human BORCS6 (BLOC-1 related complex subunit 6); INTERACTS WITH bisphenol A; endosulfan; 3-isobutyl-1-methyl-7H-xanthine (ortholog).
Type: protein-coding
RefSeq Status: VALIDATED
Also known as: BLOC-1-related complex subunit 6; hypothetical protein LOC497934; LOC497934; similar to hypothetical protein FLJ20014; uncharacterized protein C17orf59 homolog
Orthologs:
Homo sapiens (human) : BORCS6 (BLOC-1 related complex subunit 6)  HGNC  Alliance
Mus musculus (house mouse) : Borcs6 (BLOC-1 related complex subunit 6)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Borcs6 (BLOC-1 related complex subunit 6)
Pan paniscus (bonobo/pygmy chimpanzee) : BORCS6 (BLOC-1 related complex subunit 6)
Canis lupus familiaris (dog) : BORCS6 (BLOC-1 related complex subunit 6)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Borcs6 (BLOC-1 related complex subunit 6)
Sus scrofa (pig) : BORCS6 (BLOC-1 related complex subunit 6)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.01055,642,070 - 55,643,924 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.01055,385,181 - 55,387,035 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41055,814,041 - 55,815,898 (+)NCBIRGSC3.4rn4RGSC3.4
Celera1052,926,723 - 52,928,577 (+)NCBICelera
Cytogenetic Map10q24NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated
RGD Disease Portals

Genomics

Comparative Map Data
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 5.0)

Additional Information

External Database Links
Nomenclature History
 
More on Borcs6
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 1563885
Created: 2006-02-09
Species: Rattus norvegicus
Last Modified: 2019-04-23
Status: ACTIVE



NHLBI Logo

RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.