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Gene: Nlrp4 (NLR family, pyrin domain containing 4) Rattus norvegicus
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Symbol: Nlrp4
Name: NLR family, pyrin domain containing 4
Description: Predicted to have ATP binding activity. Orthologous to human NLRP4 (NLR family pyrin domain containing 4); INTERACTS WITH bisphenol A; 4,4'-diaminodiphenylmethane (ortholog); propanal (ortholog).
Type: protein-coding
RefSeq Status: VALIDATED
Also known as: LOC361498; LOC499069; NACHT, leucine rich repeat and PYD containing 4; Nalp4; NLR family, pyrin domain containing 4E; Nlrp4e; RGD1563529; RGD1564841; similar to NALP-alpha
Orthologs:
Homo sapiens (human) : NLRP4 (NLR family pyrin domain containing 4)  HGNC  Alliance
Mus musculus (house mouse) : Nlrp4c (NLR family, pyrin domain containing 4C)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Nlrp4 (NLR family pyrin domain containing 4)
Pan paniscus (bonobo/pygmy chimpanzee) : NLRP4 (NLR family pyrin domain containing 4)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Nlrp4 (NLR family pyrin domain containing 4)
Sus scrofa (pig) : NLRP4 (NLR family pyrin domain containing 4)
Chlorocebus sabaeus (African green monkey) : NLRP4 (NLR family pyrin domain containing 4)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.0171,671,575 - 71,715,241 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl171,671,575 - 71,710,420 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0173,062,798 - 73,105,491 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4166,797,942 - 66,825,101 (-)NCBIRGSC3.4rn4RGSC3.4
Celera168,956,212 - 68,994,400 (+)NCBICelera
Cytogenetic Map1q12NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome

Strain Variation

Strain Sequence Variants (Rnor 6.0)
Damaging Variants

Additional Information

External Database Links
Nomenclature History
 
More on Nlrp4
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 1563529
Created: 2006-02-09
Species: Rattus norvegicus
Last Modified: 2020-08-20
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.