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Gene: LOC500475 (similar to hypothetical protein 4933430I17) Rattus norvegicus
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Symbol: LOC500475
Name: similar to hypothetical protein 4933430I17
Description: Orthologous to human C9orf43 (chromosome 9 open reading frame 43); INTERACTS WITH bisphenol A; aflatoxin B1 (ortholog); benzo[a]pyrene (ortholog).
Type: protein-coding
RefSeq Status: PREDICTED
Also known as: hypothetical protein LOC500475; uncharacterized protein C9orf43 homolog; uncharacterized protein LOC500475
Orthologs:
Homo sapiens (human) : C9orf43 (chromosome 9 open reading frame 43)  HGNC  Alliance
Mus musculus (house mouse) : 4933430I17Rik (RIKEN cDNA 4933430I17 gene)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : LOC102026747 (chromosome unknown open reading frame, human C9orf43)
Pan paniscus (bonobo/pygmy chimpanzee) : C9H9orf43 (chromosome 9 C9orf43 homolog)
Canis lupus familiaris (dog) : C11H9orf43 (chromosome 11 C9orf43 homolog)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : CUNH9orf43 (chromosome unknown C9orf43 homolog)
Sus scrofa (pig) : C1H9orf43 (chromosome 1 C9orf43 homolog)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.0578,384,231 - 78,409,053 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.0582,521,359 - 82,531,129 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
Rnor_5.0582,503,506 - 82,511,023 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4579,521,874 - 79,546,223 (+)NCBIRGSC3.4rn4RGSC3.4
Celera574,918,923 - 74,943,100 (+)NCBICelera
Cytogenetic Map5q24NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 5.0)

Additional Information

External Database Links
Nomenclature History
 
More on LOC500475
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 1563460
Created: 2006-02-09
Species: Rattus norvegicus
Last Modified: 2019-04-12
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.