Gene: Otud1 (OTU deubiquitinase 1) Rattus norvegicus
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Symbol: Otud1
Name: OTU deubiquitinase 1
Description: Predicted to have thiol-dependent ubiquitin-specific protease activity; predicted to be involved in protein K63-linked deubiquitination; orthologous to human OTUD1 (OTU deubiquitinase 1); INTERACTS WITH 17beta-estradiol; 2,3,7,8-tetrachlorodibenzodioxine; 6-propyl-2-thiouracil.
Type: protein-coding
RefSeq Status: MODEL
Also known as: LOC498803; OTU domain containing 1; OTU domain-containing protein 1; RGD1563344; similar to OTU domain containing 1
Orthologs:
Homo sapiens (human) : OTUD1 (OTU deubiquitinase 1)  HGNC  Alliance
Mus musculus (house mouse) : Otud1 (OTU domain containing 1)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Otud1 (OTU deubiquitinase 1)
Pan paniscus (bonobo/pygmy chimpanzee) : OTUD1 (OTU deubiquitinase 1)
Canis lupus familiaris (dog) : OTUD1 (OTU deubiquitinase 1)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Otud1 (OTU deubiquitinase 1)
Sus scrofa (pig) : OTUD1 (OTU deubiquitinase 1)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.01786,406,643 - 86,410,670 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.01788,116,903 - 88,120,492 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41793,707,499 - 93,710,025 (+)NCBIRGSC3.4rn4RGSC3.4
Celera1781,524,969 - 81,534,067 (+)NCBICelera
Cytogenetic Map17q12.3NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 5.0)

Additional Information

External Database Links
Nomenclature History
 
More on Otud1
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 1563344
Created: 2006-02-09
Species: Rattus norvegicus
Last Modified: 2019-04-23
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.