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Gene: Bcl6b (BCL6B, transcription repressor) Rattus norvegicus
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Symbol: Bcl6b
Name: BCL6B, transcription repressor
RGD ID: 1563179
Description: Predicted to have DNA-binding transcription repressor activity, RNA polymerase II-specific and RNA polymerase II cis-regulatory region sequence-specific DNA binding activity. Predicted to be involved in several processes, including regulation of gene expression; regulation of inflammatory response; and type 2 immune response. Predicted to localize to nucleoplasm. Orthologous to human BCL6B (BCL6B transcription repressor); INTERACTS WITH (+)-schisandrin B; 2,3,7,8-tetrachlorodibenzodioxine; 5-methoxy-2-\{[(4-methoxy-3,5-dimethylpyridin-2-yl)methyl]sulfinyl\}-1H-benzimidazole.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: B-cell CLL/lymphoma 6 member B protein; B-cell CLL/lymphoma 6, member B; B-cell CLL/lymphoma 6, member B (zinc finger protein); B-cell CLL/lymphoma 6B; LOC360551; RGD1563179; similar to BAZF
Orthologs:
Homo sapiens (human) : BCL6B (BCL6B transcription repressor)  HGNC  Alliance
Mus musculus (house mouse) : Bcl6b (B cell CLL/lymphoma 6, member B)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Bcl6b (BCL6B transcription repressor)
Pan paniscus (bonobo/pygmy chimpanzee) : BCL6B (BCL6B transcription repressor)
Canis lupus familiaris (dog) : BCL6B (BCL6B transcription repressor)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Bcl6b (BCL6B transcription repressor)
Sus scrofa (pig) : BCL6B (BCL6B transcription repressor)
Chlorocebus sabaeus (African green monkey) : BCL6B (BCL6B transcription repressor)
Heterocephalus glaber (naked mole-rat) : Bcl6b (BCL6B transcription repressor)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.01056,834,363 - 56,840,058 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1056,834,364 - 56,839,437 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01056,578,678 - 56,583,601 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41057,063,162 - 57,068,306 (-)NCBIRGSC3.4rn4RGSC3.4
Celera1054,092,376 - 54,097,441 (-)NCBICelera
Cytogenetic Map10q24NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome

Strain Variation

Strain Sequence Variants (Rnor 6.0)
Damaging Variants

Additional Information

External Database Links
Nomenclature History
 
More on Bcl6b
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 1563179
Created: 2006-02-09
Species: Rattus norvegicus
Last Modified: 2020-08-20
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.