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Gene: Samd9 (sterile alpha motif domain containing 9) Rattus norvegicus
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Symbol: Samd9
Name: sterile alpha motif domain containing 9
Description: Predicted to be involved in several processes, including common myeloid progenitor cell proliferation; endosomal vesicle fusion; and hematopoietic or lymphoid organ development. Predicted to localize to cytosol; early endosome; and intracellular membrane-bounded organelle. Human ortholog(s) of this gene implicated in normophosphatemic familial tumoral calcinosis. Orthologous to human SAMD9 (sterile alpha motif domain containing 9); INTERACTS WITH 6-propyl-2-thiouracil; bisphenol A; cadmium dichloride.
Type: protein-coding
RefSeq Status: MODEL
Also known as: LOC500011; RGD1563091; similar to OEF2; sterile alpha motif domain-containing protein 9
Orthologs:
Homo sapiens (human) : SAMD9 (sterile alpha motif domain containing 9)  HGNC  Alliance
Mus musculus (house mouse) : Samd9l (sterile alpha motif domain containing 9-like)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Samd9 (sterile alpha motif domain containing 9)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Samd9 (sterile alpha motif domain containing 9)
Sus scrofa (pig) : LOC100519098 (sterile alpha motif domain-containing protein 9)
Chlorocebus sabaeus (African green monkey) : SAMD9 (sterile alpha motif domain containing 9)
Heterocephalus glaber (naked mole-rat) : Samd9 (sterile alpha motif domain containing 9)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.0428,304,967 - 28,324,637 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl428,305,002 - 28,310,178 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0428,207,263 - 28,226,935 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4427,975,918 - 27,980,933 (-)NCBIRGSC3.4rn4RGSC3.4
Celera426,581,236 - 26,600,896 (-)NCBICelera
Cytogenetic Map4q13NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
 
More on Samd9
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 1563091
Created: 2006-02-09
Species: Rattus norvegicus
Last Modified: 2020-08-20
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.