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Gene: Samd9 (sterile alpha motif domain containing 9) Rattus norvegicus
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Symbol: Samd9
Name: sterile alpha motif domain containing 9
Description: Predicted to be involved in several processes, including common myeloid progenitor cell proliferation; endosomal vesicle fusion; and hematopoietic or lymphoid organ development. Predicted to localize to the cytosol; early endosome; and intracellular membrane-bounded organelle. Human ortholog(s) of this gene implicated in normophosphatemic familial tumoral calcinosis. Orthologous to human SAMD9 (sterile alpha motif domain containing 9); INTERACTS WITH (S)-10-[(DIMETHYLAMINO)METHYL]-4-ETHYL-4,9-DIHYDROXY-1H-PYRANO[3',4':6,7]INOLIZINO[1,2-B]-QUINOLINE-3,14(4H,12H)-DIONE; 6-propyl-2-thiouracil; bisphenol A.
Type: protein-coding
RefSeq Status: MODEL
Also known as: LOC500011; RGD1563091; similar to OEF2; sterile alpha motif domain-containing protein 9
Orthologs:
Homo sapiens (human) : SAMD9 (sterile alpha motif domain containing 9)  HGNC  Alliance
Mus musculus (house mouse) : Samd9l (sterile alpha motif domain containing 9-like)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Samd9 (sterile alpha motif domain containing 9)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Samd9 (sterile alpha motif domain containing 9)
Sus scrofa (pig) : LOC100519098 (sterile alpha motif domain-containing protein 9)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.0428,304,967 - 28,324,637 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.0428,207,263 - 28,226,935 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4427,975,918 - 27,980,933 (-)NCBIRGSC3.4rn4RGSC3.4
Celera426,581,236 - 26,600,896 (-)NCBICelera
Cytogenetic Map4q13NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated
RGD Disease Portals

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome

Strain Variation

Strain Sequence Variants (Rnor 5.0)

Additional Information

External Database Links
Nomenclature History
 
More on Samd9
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 1563091
Created: 2006-02-09
Species: Rattus norvegicus
Last Modified: 2019-04-23
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.