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Gene: Tafa1 (TAFA chemokine like family member 1) Rattus norvegicus
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Symbol: Tafa1
Name: TAFA chemokine like family member 1
RGD ID: 1563030
Description: Predicted to have receptor ligand activity. Predicted to be involved in neuroblast differentiation; regulation of neuroblast proliferation; and regulation of signaling receptor activity. Predicted to localize to endoplasmic reticulum and extracellular space. Orthologous to human TAFA1 (TAFA chemokine like family member 1); INTERACTS WITH bisphenol A; indole-3-methanol; ketamine.
Type: protein-coding
RefSeq Status: MODEL
Also known as: Fam19a1; family with sequence similarity 19 (chemokine (C-C motif)-like), member A1; family with sequence similarity 19 member A1, C-C motif chemokine like; LOC500266; RGD1563030; similar to TAFA1 protein
Orthologs:
Homo sapiens (human) : TAFA1 (TAFA chemokine like family member 1)  HGNC  Alliance
Mus musculus (house mouse) : Tafa1 (TAFA chemokine like family member 1)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Tafa1 (TAFA chemokine like family member 1)
Pan paniscus (bonobo/pygmy chimpanzee) : TAFA1 (TAFA chemokine like family member 1)
Canis lupus familiaris (dog) : TAFA1 (TAFA chemokine like family member 1)
Sus scrofa (pig) : TAFA1 (TAFA chemokine like family member 1)
Chlorocebus sabaeus (African green monkey) : TAFA1 (TAFA chemokine like family member 1)
Heterocephalus glaber (naked mole-rat) : Tafa1 (TAFA chemokine like family member 1)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.04128,818,468 - 128,942,088 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.04193,307,937 - 193,448,717 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
Rnor_5.04193,279,249 - 193,279,417 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.44131,051,719 - 131,171,835 (-)NCBIRGSC3.4rn4RGSC3.4
Celera4117,631,927 - 118,134,564 (+)NCBICelera
Cytogenetic Map4q34NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)

Expression


Sequence

Nucleotide Sequences
Protein Sequences

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
 
More on Tafa1
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 1563030
Created: 2006-02-09
Species: Rattus norvegicus
Last Modified: 2020-08-20
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.