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Gene: Chst13 (carbohydrate sulfotransferase 13) Rattus norvegicus
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Symbol: Chst13
Name: carbohydrate sulfotransferase 13
RGD ID: 1562825
Description: Predicted to have N-acetylgalactosamine 4-O-sulfotransferase activity and chondroitin 4-sulfotransferase activity. Predicted to be involved in chondroitin sulfate biosynthetic process. Predicted to localize to Golgi membrane and integral component of membrane. Orthologous to human CHST13 (carbohydrate sulfotransferase 13); PARTICIPATES IN chondroitin sulfate biosynthetic pathway; sulfur metabolic pathway; INTERACTS WITH bisphenol A; endosulfan; 17beta-estradiol (ortholog).
Type: protein-coding
RefSeq Status: INFERRED
Also known as: carbohydrate (chondroitin 4) sulfotransferase 13; LOC500257; RGD1562825; similar to carbohydrate (chondroitin 4) sulfotransferase 13
Orthologs:
Homo sapiens (human) : CHST13 (carbohydrate sulfotransferase 13)  HGNC  Alliance
Mus musculus (house mouse) : Chst13 (carbohydrate sulfotransferase 13)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Chst13 (carbohydrate sulfotransferase 13)
Pan paniscus (bonobo/pygmy chimpanzee) : CHST13 (carbohydrate sulfotransferase 13)
Canis lupus familiaris (dog) : CHST13 (carbohydrate sulfotransferase 13)
Sus scrofa (pig) : CHST13 (carbohydrate sulfotransferase 13)
Chlorocebus sabaeus (African green monkey) : CHST13 (carbohydrate sulfotransferase 13)
Heterocephalus glaber (naked mole-rat) : Chst13 (carbohydrate sulfotransferase 13)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.04122,223,846 - 122,244,848 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl4122,224,535 - 122,237,754 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.04186,765,215 - 186,786,132 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.44124,571,623 - 124,584,842 (-)NCBIRGSC3.4rn4RGSC3.4
Celera4111,749,499 - 111,762,718 (-)NCBICelera
Cytogenetic Map4q34NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
Molecular Pathway Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 6.0)
Damaging Variants

Additional Information

External Database Links
Nomenclature History
 
More on Chst13
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 1562825
Created: 2006-02-09
Species: Rattus norvegicus
Last Modified: 2020-08-20
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.