Submit Data |  Help |  Video Tutorials |  News |  Publications |  FTP Download |  REST API |  Citing RGD |  Contact   
Gene: Shf (Src homology 2 domain containing F) Rattus norvegicus
Analyze
Symbol: Shf
Name: Src homology 2 domain containing F
Description: Predicted to have phosphotyrosine residue binding activity. Orthologous to human SHF (Src homology 2 domain containing F); PARTICIPATES IN platelet-derived growth factor signaling pathway; INTERACTS WITH (+)-schisandrin B; 2,3,7,8-tetrachlorodibenzodioxine; bisphenol A.
Type: protein-coding
RefSeq Status: MODEL
Also known as: LOC362205; RGD1562705; SH2 domain-containing adapter protein F; similar to Shb-like adapter protein, Shf - human
Orthologs:
Homo sapiens (human) : SHF (Src homology 2 domain containing F)  HGNC  Alliance
Mus musculus (house mouse) : Shf (Src homology 2 domain containing F)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Shf (Src homology 2 domain containing F)
Pan paniscus (bonobo/pygmy chimpanzee) : SHF (Src homology 2 domain containing F)
Canis lupus familiaris (dog) : SHF (Src homology 2 domain containing F)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Shf (Src homology 2 domain containing F)
Sus scrofa (pig) : SHF (Src homology 2 domain containing F)
Chlorocebus sabaeus (green monkey) : SHF (Src homology 2 domain containing F)
Heterocephalus glaber (naked mole-rat) : Shf (Src homology 2 domain containing F)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
NCBI Annotation Information: Annotation category: partial on reference assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.03114,288,021 - 114,307,334 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl3114,287,718 - 114,307,250 (-)Ensembl
Rnor_5.03120,827,311 - 120,837,513 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.43109,129,634 - 109,169,928 (-)NCBIRGSC3.4rn4RGSC3.4
Celera3108,194,195 - 108,213,507 (-)NCBICelera
Cytogenetic Map3q35NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
Molecular Pathway Annotations
References - curated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
 
More on Shf
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 1562705
Created: 2006-02-09
Species: Rattus norvegicus
Last Modified: 2019-11-27
Status: ACTIVE



NHLBI Logo

RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.