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Gene: Tra2a (transformer 2 alpha homolog) Rattus norvegicus
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Symbol: Tra2a
Name: transformer 2 alpha homolog
Description: Predicted to have RNA binding activity and identical protein binding activity. Predicted to be involved in mRNA splicing, via spliceosome and positive regulation of mRNA splicing, via spliceosome. Predicted to localize to the nucleolus and ribonucleoprotein complex. Orthologous to human TRA2A (transformer 2 alpha homolog); PARTICIPATES IN spliceosome pathway; INTERACTS WITH (S)-10-[(DIMETHYLAMINO)METHYL]-4-ETHYL-4,9-DIHYDROXY-1H-PYRANO[3',4':6,7]INOLIZINO[1,2-B]-QUINOLINE-3,14(4H,12H)-DIONE; 1-naphthyl isothiocyanate; 2,3,7,8-tetrachlorodibenzodioxine.
Type: protein-coding
RefSeq Status: VALIDATED
Also known as: LOC500116; RGD1562563; similar to RIKEN cDNA G430041M01; transformer 2 alpha homolog (Drosophila); transformer-2 alpha; transformer-2 protein homolog alpha
Orthologs:
Homo sapiens (human) : TRA2A (transformer 2 alpha homolog)  HGNC  Alliance
Mus musculus (house mouse) : Tra2a (transformer 2 alpha)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Tra2a (transformer 2 alpha homolog)
Pan paniscus (bonobo/pygmy chimpanzee) : TRA2A (transformer 2 alpha homolog)
Canis lupus familiaris (dog) : TRA2A (transformer 2 alpha homolog)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Tra2a (transformer 2 alpha homolog)
Sus scrofa (pig) : TRA2A (transformer 2 alpha homolog)
more info ...
Related Pseudogenes: LOC100363488   LOC680953  
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.0478,905,380 - 78,924,203 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.04143,594,550 - 143,613,369 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4477,372,546 - 77,391,417 (-)NCBIRGSC3.4rn4RGSC3.4
Celera473,156,096 - 73,174,981 (-)NCBICelera
Cytogenetic Map4q24NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
Molecular Pathway Annotations
References - curated
References - uncurated
RGD Disease Portals

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 5.0)

Additional Information

External Database Links
Nomenclature History
 
More on Tra2a
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 1562563
Created: 2006-02-09
Species: Rattus norvegicus
Last Modified: 2019-04-23
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.