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Gene: Zfp398 (zinc finger protein 398) Rattus norvegicus
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Symbol: Zfp398
Name: zinc finger protein 398
Description: Predicted to have metal ion binding activity and nucleic acid binding activity. Predicted to be involved in regulation of transcription, DNA-templated. Predicted to localize to the nucleus. Orthologous to human ZNF398 (zinc finger protein 398); INTERACTS WITH (RS)-amphetamine; aflatoxin B1 (ortholog); benzo[a]pyrene (ortholog).
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: LOC500108; RGD1562129; similar to zinc finger protein 398
Orthologs:
Homo sapiens (human) : ZNF398 (zinc finger protein 398)  HGNC  Alliance
Mus musculus (house mouse) : Zfp398 (zinc finger protein 398)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Znf398 (zinc finger protein 398)
Pan paniscus (bonobo/pygmy chimpanzee) : ZNF398 (zinc finger protein 398)
Canis lupus familiaris (dog) : ZNF398 (zinc finger protein 398)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Znf398 (zinc finger protein 398)
Sus scrofa (pig) : LOC100522942 (zinc finger protein 398)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.0477,519,018 - 77,546,517 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.04142,188,819 - 142,215,380 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4475,975,752 - 76,002,315 (+)NCBIRGSC3.4rn4RGSC3.4
Celera471,798,375 - 71,824,733 (+)NCBICelera
Cytogenetic Map4q24NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 5.0)
Damaging Variants

Additional Information

External Database Links
Nomenclature History
 
More on Zfp398
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 1562129
Created: 2006-02-09
Species: Rattus norvegicus
Last Modified: 2019-04-12
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.