Zfp462 (zinc finger protein 462) - Rat Genome Database

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Gene: Zfp462 (zinc finger protein 462) Rattus norvegicus
Analyze
Symbol: Zfp462
Name: zinc finger protein 462
RGD ID: 1562123
Description: Predicted to be involved in positive regulation of transcription by RNA polymerase II. Predicted to act upstream of or within chromatin organization. Predicted to be located in nucleoplasm. Predicted to be active in nucleus. Orthologous to human ZNF462 (zinc finger protein 462); INTERACTS WITH 17alpha-ethynylestradiol; 17beta-estradiol; 2,2',4,4'-Tetrabromodiphenyl ether.
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: LOC362522; RGD1562123; similar to hypothetical protein
RGD Orthologs
Human
Mouse
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: mRatBN7.2 - mRatBN7.2 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8574,465,383 - 74,606,020 (+)NCBIGRCr8
mRatBN7.2569,670,085 - 69,810,729 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl569,670,328 - 69,810,327 (+)EnsemblmRatBN7.2 Ensembl
Rnor_6.0571,679,841 - 71,824,077 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl571,742,911 - 71,823,139 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0575,851,111 - 75,987,972 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4572,167,944 - 72,960,561 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
Celera568,539,404 - 68,675,674 (+)NCBICelera
Cytogenetic Map5q24NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component
nucleoplasm  (ISO)
nucleus  (IBA,ISO)

Molecular Function

References

References - curated
# Reference Title Reference Citation
1. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2. GOA pipeline RGD automated data pipeline
3. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
4. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:17353115   PMID:20219459  


Genomics

Comparative Map Data
Zfp462
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8574,465,383 - 74,606,020 (+)NCBIGRCr8
mRatBN7.2569,670,085 - 69,810,729 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl569,670,328 - 69,810,327 (+)EnsemblmRatBN7.2 Ensembl
Rnor_6.0571,679,841 - 71,824,077 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl571,742,911 - 71,823,139 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0575,851,111 - 75,987,972 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4572,167,944 - 72,960,561 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
Celera568,539,404 - 68,675,674 (+)NCBICelera
Cytogenetic Map5q24NCBI
ZNF462
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh389106,860,158 - 107,013,634 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl9106,863,166 - 107,013,634 (+)EnsemblGRCh38hg38GRCh38
GRCh379109,625,447 - 109,775,915 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 369108,665,199 - 108,813,628 (+)NCBINCBI36Build 36hg18NCBI36
Build 349106,704,932 - 106,853,344NCBI
Celera980,129,626 - 80,278,036 (+)NCBICelera
Cytogenetic Map9q31.2NCBI
HuRef979,228,691 - 79,377,100 (+)NCBIHuRef
CHM1_19109,772,762 - 109,921,142 (+)NCBICHM1_1
T2T-CHM13v2.09119,036,267 - 119,189,919 (+)NCBIT2T-CHM13v2.0
Zfp462
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39454,942,038 - 55,083,563 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl454,945,048 - 55,083,563 (+)EnsemblGRCm39 Ensembl
GRCm38454,944,491 - 55,083,563 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl454,945,048 - 55,083,563 (+)EnsemblGRCm38mm10GRCm38
MGSCv37454,960,817 - 55,096,435 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36455,041,277 - 55,102,704 (+)NCBIMGSCv36mm8
Celera454,863,764 - 55,006,024 (+)NCBICelera
Cytogenetic Map4B2NCBI
cM Map429.5NCBI
Znf462
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495541919,727,926 - 19,823,080 (-)EnsemblChiLan1.0
ChiLan1.0NW_00495541919,730,432 - 19,871,189 (-)NCBIChiLan1.0ChiLan1.0
ZNF462
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21132,389,816 - 32,543,418 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1932,392,185 - 32,545,787 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0978,015,173 - 78,168,766 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.19106,204,605 - 106,357,848 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl9106,267,333 - 106,357,848 (+)Ensemblpanpan1.1panPan2
ZNF462
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11162,398,415 - 62,535,289 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl1162,450,060 - 62,535,121 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha1160,796,792 - 60,933,578 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.01163,539,169 - 63,676,144 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl1163,539,726 - 63,675,769 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.11162,062,856 - 62,199,597 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.01162,073,021 - 62,209,883 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.01162,774,423 - 62,911,389 (+)NCBIUU_Cfam_GSD_1.0
Znf462
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024404947177,618,949 - 177,755,651 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049365595,510,892 - 5,596,528 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049365595,510,933 - 5,644,727 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
ZNF462
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1248,031,631 - 248,179,784 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11248,029,136 - 248,181,792 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21278,447,492 - 278,558,903 (+)NCBISscrofa10.2Sscrofa10.2susScr3
ZNF462
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11232,532,853 - 32,687,262 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl1232,520,334 - 32,685,464 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366603510,005,048 - 10,157,013 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Znf462
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046247584,490,035 - 4,639,378 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046247584,490,604 - 4,650,629 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in Zfp462
616 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:177
Count of miRNA genes:110
Interacting mature miRNAs:120
Transcripts:ENSRNOT00000047225, ENSRNOT00000064623
Prediction methods:Microtar, Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (mRatBN7.2)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1578776Stresp18Stress response QTL 182.9thymus mass (VT:0004954)thymus wet weight (CMO:0000855)52795544072955440Rat
1298067Scl15Serum cholesterol level QTL 154.80.001blood cholesterol amount (VT:0000180)plasma total cholesterol level (CMO:0000585)53321566578215665Rat
1300115Hrtrt7Heart rate QTL 72.76heart pumping trait (VT:2000009)heart rate (CMO:0000002)54786906290099692Rat
1357396Bw44Body weight QTL 444.19body mass (VT:0001259)body weight (CMO:0000012)568984307104251008Rat
1549845Scl44Serum cholesterol level QTL 446blood cholesterol amount (VT:0000180)serum total cholesterol level (CMO:0000363)540128307148607290Rat
61380Edpm5Estrogen-dependent pituitary mass QTL 54.50.92pituitary gland mass (VT:0010496)pituitary gland wet weight (CMO:0000853)568984307104251008Rat
70212Niddm25Non-insulin dependent diabetes mellitus QTL 253.54blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)51131345958Rat
1358353Srcrtb2Stress Responsive Cort Basal QTL 23.480.003blood corticosterone amount (VT:0005345)plasma corticosterone level (CMO:0001173)51887394774251464Rat
1598814Mcs13Mammary carcinoma susceptibility QTL 130.0001mammary gland integrity trait (VT:0010552)mammary tumor number (CMO:0000343)56319089069927503Rat
634305Mamtr1Mammary tumor resistance QTL 10.0001mammary gland integrity trait (VT:0010552)mammary tumor number (CMO:0000343)512789751113558310Rat
61386Bp49Blood pressure QTL 4916.6cerebrum integrity trait (VT:0010549)brain infarction volume (CMO:0001013)56029343498603051Rat
1331801Rf33Renal function QTL 334.149kidney blood vessel physiology trait (VT:0100012)absolute change in renal vascular resistance (CMO:0001900)543726656129132602Rat
1357402Bw46Body weight QTL 464.47body mass (VT:0001259)body mass index (BMI) (CMO:0000105)568984307104251008Rat
2302381Bw84Body weight QTL 844.47body mass (VT:0001259)body mass index (BMI) (CMO:0000105)568984307104251008Rat
1598807Glom12Glomerulus QTL 122.7kidney glomerulus morphology trait (VT:0005325)index of glomerular damage (CMO:0001135)53321566578215665Rat
1302786Kidm8Kidney mass QTL 828.15kidney mass (VT:0002707)both kidneys wet weight to body weight ratio (CMO:0000340)53321566578215665Rat
61393Bp7Blood pressure QTL 74.50.0001arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)560293434161481680Rat
6903292Stl28Serum triglyceride level QTL 282.60.0073blood triglyceride amount (VT:0002644)plasma triglyceride level (CMO:0000548)52851548973515489Rat
1578766Tcas11Tongue tumor susceptibility QTL 114.12tongue integrity trait (VT:0010553)number of squamous cell tumors of the tongue with diameter greater than 3 mm (CMO:0001950)546711509161317411Rat
1578767Stresp17Stress response QTL 174.30.01blood aldosterone amount (VT:0005346)plasma aldosterone level (CMO:0000551)52795544072955440Rat
7411561Bw134Body weight QTL 134240.001body mass (VT:0001259)body weight gain (CMO:0000420)54946360094463600Rat
2303615Vencon7Ventilatory control QTL 70.001respiration trait (VT:0001943)respiration rate (CMO:0000289)55098389595983895Rat
1576312Emca8Estrogen-induced mammary cancer QTL 84.1mammary gland integrity trait (VT:0010552)mammary tumor number (CMO:0000343)550328551141643988Rat
1641912Alcrsp18Alcohol response QTL 18response to alcohol trait (VT:0010489)duration of loss of righting reflex (CMO:0002289)535189153141643988Rat
1576314Eutr1Estrogen induced uterine response QTL 1uterus integrity trait (VT:0010575)pyometritis severity score (CMO:0002009)52138965166875058Rat
6903306Scl35Serum cholesterol QTL 352.60.0073blood cholesterol amount (VT:0000180)plasma total cholesterol level (CMO:0000585)52851548973515489Rat
1576317Eutr2Estrogen induced uterine response QTL 20.01uterus integrity trait (VT:0010575)pyometritis severity score (CMO:0002009)534730116104251008Rat
7394712Emca13Estrogen-induced mammary cancer QTL 13mammary gland integrity trait (VT:0010552)mammary tumor number (CMO:0000343)5982326699753708Rat
1331773Scl26Serum cholesterol level QTL 263.065blood cholesterol amount (VT:0000180)serum total cholesterol level (CMO:0000363)54372665686724018Rat
70189Mcs5Mammary carcinoma susceptibility QTL 510.51mammary gland integrity trait (VT:0010552)mammary tumor number (CMO:0000343)555805606132207589Rat
1331771Rf35Renal function QTL 354.36965kidney blood vessel physiology trait (VT:0100012)absolute change in renal blood flow rate (CMO:0001168)572947086724018Rat
61359EaexExperimental allergic encephalomyelitis QTL x3nervous system integrity trait (VT:0010566)post-insult time to onset of experimental autoimmune encephalomyelitis (CMO:0001422)555715622100715622Rat
2290448Scl54Serum cholesterol level QTL 542.93blood cholesterol amount (VT:0000180)plasma total cholesterol level (CMO:0000585)531663789131345958Rat
61426Scl2Serum cholesterol level QTL 27.30.001blood cholesterol amount (VT:0000180)serum total cholesterol level (CMO:0000363)559793399143070159Rat
1354598Srn6Serum renin concentration QTL 63.8blood renin amount (VT:0003349)plasma renin activity level (CMO:0000116)569540295151018848Rat
9589025Epfw7Epididymal fat weight QTL 720.660.001epididymal fat pad mass (VT:0010421)epididymal fat pad weight to body weight ratio (CMO:0000658)54946360094463600Rat
2303574Gluco42Glucose level QTL 422blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)55349671998496719Rat
2290005Mcs24Mammary carcinoma susceptibility QTL 24mammary gland integrity trait (VT:0010552)mammary tumor number (CMO:0000343)564719390109719390Rat
1331756Rf34Renal function QTL 344.16275kidney blood vessel physiology trait (VT:0100012)absolute change in renal blood flow rate (CMO:0001168)5190450412Rat
2306971Anxrr21Anxiety related response QTL 219.47fear/anxiety-related behavior trait (VT:1000241)number of entries into a discrete space in an experimental apparatus (CMO:0000960)566174080124160948Rat
2316954Rf57Renal function QTL 570kidney glomerulus morphology trait (VT:0005325)index of glomerular damage (CMO:0001135)55979352890450144Rat
1358895Bp254Blood pressure QTL 2543.60.0003arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)558829236128034027Rat
2316959Gluco59Glucose level QTL 594.7blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)534944474113558310Rat
2312671Scl64Serum cholesterol level QTL 640.001blood cholesterol amount (VT:0000180)serum total cholesterol level (CMO:0000363)568984307104251008Rat
2316957Pur21Proteinuria QTL 216.2urine protein amount (VT:0005160)urine protein level (CMO:0000591)559793528113558156Rat

Markers in Region
D5Mit2  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2569,285,133 - 69,285,327 (+)MAPPERmRatBN7.2
Rnor_6.0573,869,372 - 73,869,565NCBIRnor6.0
Rnor_5.0578,024,623 - 78,024,816UniSTSRnor5.0
RGSC_v3.4572,389,008 - 72,389,202RGDRGSC3.4
RGSC_v3.4572,389,009 - 72,389,202UniSTSRGSC3.4
RGSC_v3.1572,394,122 - 72,394,315RGD
Celera568,154,413 - 68,154,606UniSTS
RH 3.4 Map5461.0UniSTS
RH 3.4 Map5461.0RGD
RH 2.0 Map5385.6RGD
Cytogenetic Map5q24UniSTS
D5Rat104  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2569,257,224 - 69,257,424 (+)MAPPERmRatBN7.2
Rnor_6.0573,841,480 - 73,841,679NCBIRnor6.0
Rnor_5.0577,995,999 - 77,996,198UniSTSRnor5.0
RGSC_v3.4572,360,750 - 72,360,950RGDRGSC3.4
RGSC_v3.4572,360,751 - 72,360,950UniSTSRGSC3.4
RGSC_v3.1572,365,863 - 72,366,063RGD
Celera568,126,617 - 68,126,816UniSTS
FHH x ACI Map534.68RGD
FHH x ACI Map534.68UniSTS
Cytogenetic Map5q24UniSTS
D5Got123  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2569,285,128 - 69,285,378 (+)MAPPERmRatBN7.2
Rnor_6.0573,869,367 - 73,869,616NCBIRnor6.0
Rnor_5.0578,024,618 - 78,024,867UniSTSRnor5.0
RGSC_v3.4572,389,003 - 72,389,253RGDRGSC3.4
RGSC_v3.4572,389,004 - 72,389,253UniSTSRGSC3.4
RGSC_v3.1572,394,117 - 72,394,366RGD
Celera568,154,408 - 68,154,657UniSTS
RH 3.4 Map5459.0UniSTS
RH 3.4 Map5459.0RGD
RH 2.0 Map5386.6RGD
Cytogenetic Map5q24UniSTS
D5Got233  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2569,257,189 - 69,257,389 (+)MAPPERmRatBN7.2
Rnor_6.0573,841,445 - 73,841,644NCBIRnor6.0
Rnor_5.0577,995,964 - 77,996,163UniSTSRnor5.0
RGSC_v3.4572,360,716 - 72,360,915UniSTSRGSC3.4
Celera568,126,582 - 68,126,781UniSTS
Cytogenetic Map5q24UniSTS
RH139843  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2569,671,640 - 69,671,822 (+)MAPPERmRatBN7.2
Rnor_6.0571,682,374 - 71,682,555NCBIRnor6.0
Rnor_5.0575,849,726 - 75,849,907UniSTSRnor5.0
RGSC_v3.4572,107,353 - 72,107,534UniSTSRGSC3.4
Celera568,537,796 - 68,537,977UniSTS
RH 3.4 Map5461.0UniSTS
Cytogenetic Map5q24UniSTS
BF389119  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2569,754,303 - 69,754,462 (+)MAPPERmRatBN7.2
Rnor_6.0571,764,739 - 71,764,897NCBIRnor6.0
Rnor_5.0575,931,943 - 75,932,101UniSTSRnor5.0
RGSC_v3.4572,887,061 - 72,887,219UniSTSRGSC3.4
Celera568,620,222 - 68,620,380UniSTS
RH 3.4 Map5463.0UniSTS
Cytogenetic Map5q24UniSTS
RH137856  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2569,684,386 - 69,684,581 (+)MAPPERmRatBN7.2
Rnor_6.0571,695,037 - 71,695,231NCBIRnor6.0
Rnor_5.0575,862,235 - 75,862,429UniSTSRnor5.0
RGSC_v3.4572,120,309 - 72,120,503UniSTSRGSC3.4
Celera568,550,530 - 68,550,724UniSTS
RH 3.4 Map5463.0UniSTS
Cytogenetic Map5q24UniSTS
D9S187E  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2569,733,808 - 69,733,879 (+)MAPPERmRatBN7.2
Rnor_6.0571,744,720 - 71,744,790NCBIRnor6.0
Rnor_5.0575,911,918 - 75,911,988UniSTSRnor5.0
RGSC_v3.4572,169,725 - 72,169,795UniSTSRGSC3.4
Celera568,600,307 - 68,600,377UniSTS
Cytogenetic Map5q24UniSTS


Expression

RNA-SEQ Expression

alimentary part of gastrointestinal system
appendage
circulatory system
ectoderm
endocrine system
endoderm
exocrine system
hemolymphoid system
hepatobiliary system
integumental system
mesenchyme
mesoderm
nervous system
renal system
reproductive system
respiratory system
9 11 49 113 91 90 59 25 59 6 218 97 93 45 60 31

Sequence


Ensembl Acc Id: ENSRNOT00000047225   ⟹   ENSRNOP00000048648
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl569,670,328 - 69,810,327 (+)Ensembl
Rnor_6.0 Ensembl571,742,911 - 71,823,139 (+)Ensembl
RefSeq Acc Id: NM_001427395   ⟹   NP_001414324
RefSeq Status: VALIDATED
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8574,468,643 - 74,606,020 (+)NCBI
RefSeq Acc Id: XM_039111031   ⟹   XP_038966959
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8574,466,536 - 74,606,020 (+)NCBI
mRatBN7.2569,672,708 - 69,810,729 (+)NCBI
RefSeq Acc Id: XM_039111032   ⟹   XP_038966960
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8574,465,383 - 74,606,020 (+)NCBI
mRatBN7.2569,670,085 - 69,810,729 (+)NCBI
RefSeq Acc Id: XM_039111033   ⟹   XP_038966961
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8574,466,536 - 74,606,020 (+)NCBI
mRatBN7.2569,673,759 - 69,810,729 (+)NCBI
RefSeq Acc Id: XM_039111034   ⟹   XP_038966962
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8574,469,616 - 74,606,020 (+)NCBI
mRatBN7.2569,674,374 - 69,810,729 (+)NCBI
RefSeq Acc Id: XM_039111037   ⟹   XP_038966965
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8574,466,542 - 74,606,020 (+)NCBI
mRatBN7.2569,732,028 - 69,808,053 (+)NCBI
RefSeq Acc Id: XM_063287930   ⟹   XP_063144000
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8574,466,525 - 74,544,254 (+)NCBI
Ensembl Acc Id: ENSRNOP00000048648   ⟸   ENSRNOT00000047225
RefSeq Acc Id: XP_038966960   ⟸   XM_039111032
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038966959   ⟸   XM_039111031
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038966961   ⟸   XM_039111033
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038966962   ⟸   XM_039111034
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038966965   ⟸   XM_039111037
- Peptide Label: isoform X3
RefSeq Acc Id: XP_063144000   ⟸   XM_063287930
- Peptide Label: isoform X2
RefSeq Acc Id: NP_001414324   ⟸   NM_001427395
- UniProtKB: D3ZFG7 (UniProtKB/TrEMBL)
Protein Domains
C2H2-type

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-D3ZFG7-F1-model_v2 AlphaFold D3ZFG7 1-2504 view protein structure

Transcriptome

eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen


Additional Information

Database Acc Id Source(s)
AGR Gene RGD:1562123 AgrOrtholog
BioCyc Gene G2FUF-41247 BioCyc
Ensembl Genes ENSRNOG00000032048 Ensembl, UniProtKB/TrEMBL
Ensembl Transcript ENSRNOT00000047225.7 UniProtKB/TrEMBL
Gene3D-CATH Classic Zinc Finger UniProtKB/TrEMBL
InterPro Zinc_finger/UBP_domain UniProtKB/TrEMBL
  Znf_C2H2/integrase_DNA-bd UniProtKB/TrEMBL
  Znf_C2H2_sf UniProtKB/TrEMBL
NCBI Gene 362522 ENTREZGENE
PANTHER ZINC FINGER PROTEIN UniProtKB/TrEMBL
  ZINC FINGER PROTEIN 462 UniProtKB/TrEMBL
PhenoGen Zfp462 PhenoGen
PROSITE ZINC_FINGER_C2H2_1 UniProtKB/TrEMBL
  ZINC_FINGER_C2H2_2 UniProtKB/TrEMBL
RatGTEx ENSRNOG00000032048 RatGTEx
SMART ZnF_C2H2 UniProtKB/TrEMBL
Superfamily-SCOP SSF57667 UniProtKB/TrEMBL
UniProt D3ZFG7 ENTREZGENE, UniProtKB/TrEMBL


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2008-02-29 Zfp462  zinc finger protein 462  RGD1562123_predicted  similar to hypothetical protein (predicted)  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2006-03-07 RGD1562123_predicted  similar to hypothetical protein (predicted)  LOC362522  similar to hypothetical protein  Symbol and Name status set to approved 1299863 APPROVED
2006-02-09 LOC362522  similar to hypothetical protein      Symbol and Name status set to provisional 70820 PROVISIONAL