Submit Data |  Help |  Video Tutorials |  News |  Publications |  FTP Download |  REST API |  Citing RGD |  Contact   
Gene: Tmem88 (transmembrane protein 88) Rattus norvegicus
Analyze
Symbol: Tmem88
Name: transmembrane protein 88
Description: Predicted to have PDZ domain binding activity. Predicted to be involved in negative regulation of canonical Wnt signaling pathway; protein localization to plasma membrane; and protein stabilization. Predicted to localize to the cytosol and plasma membrane. Orthologous to human TMEM88 (transmembrane protein 88); INTERACTS WITH amphetamine; bisphenol A; Soman.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: LOC497936; RGD1561781; similar to RIKEN cDNA 2600017H02
Orthologs:
Homo sapiens (human) : TMEM88 (transmembrane protein 88)  HGNC  Alliance
Mus musculus (house mouse) : Tmem88 (transmembrane protein 88)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Tmem88 (transmembrane protein 88)
Pan paniscus (bonobo/pygmy chimpanzee) : TMEM88 (transmembrane protein 88)
Canis lupus familiaris (dog) : TMEM88 (transmembrane protein 88)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Tmem88 (transmembrane protein 88)
Sus scrofa (pig) : TMEM88 (transmembrane protein 88)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.01055,998,530 - 56,000,225 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1055,998,530 - 56,000,225 (-)Ensembl
Rnor_5.01055,740,605 - 55,742,300 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41056,191,035 - 56,192,730 (-)NCBIRGSC3.4rn4RGSC3.4
Celera1053,275,249 - 53,276,944 (-)NCBICelera
Cytogenetic Map10q24NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
 
More on Tmem88
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 1561781
Created: 2006-02-09
Species: Rattus norvegicus
Last Modified: 2019-11-27
Status: ACTIVE



NHLBI Logo

RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.