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Gene: Cdc42se1 (CDC42 small effector 1) Rattus norvegicus
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Symbol: Cdc42se1
Name: CDC42 small effector 1
Description: Predicted to have Rho GTPase binding activity. Predicted to be involved in phagocytosis; regulation of Rho protein signal transduction; and regulation of cell shape. Predicted to localize to the cell junction and plasma membrane. Orthologous to human CDC42SE1 (CDC42 small effector 1); INTERACTS WITH 1-naphthyl isothiocyanate; 2,4-dinitrotoluene; 4,4'-diaminodiphenylmethane.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: CDC42 small effector protein 1
Orthologs:
Homo sapiens (human) : CDC42SE1 (CDC42 small effector 1)  HGNC  Alliance
Mus musculus (house mouse) : Cdc42se1 (CDC42 small effector 1)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Cdc42se1 (CDC42 small effector 1)
Pan paniscus (bonobo/pygmy chimpanzee) : CDC42SE1 (CDC42 small effector 1)
Canis lupus familiaris (dog) : CDC42SE1 (CDC42 small effector 1)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Cdc42se1 (CDC42 small effector 1)
Sus scrofa (pig) : CDC42SE1 (CDC42 small effector 1)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
NCBI Annotation Information: Annotation category: suggests misassembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.02196,402,837 - 196,410,664 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl2196,402,837 - 196,410,659 (+)Ensembl
Rnor_5.02215,899,668 - 215,907,495 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.42190,138,391 - 190,146,015 (+)NCBIRGSC3.4rn4RGSC3.4
Celera2175,339,341 - 175,347,166 (+)NCBICelera
Cytogenetic Map2q34NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
 
More on Cdc42se1
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 1561700
Created: 2006-02-09
Species: Rattus norvegicus
Last Modified: 2019-10-16
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.