Mga (Rattus norvegicus - Norway rat) |
Rat Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
---|
GRCr8 | 3 | 127,300,558 - 127,396,694 (+) | NCBI | | GRCr8 | | | mRatBN7.2 | 3 | 106,851,216 - 106,942,908 (+) | NCBI | mRatBN7.2 | mRatBN7.2 | | | mRatBN7.2 Ensembl | 3 | 106,851,140 - 106,941,043 (+) | Ensembl | | mRatBN7.2 Ensembl | | | Rnor_6.0 | 3 | 111,669,645 - 111,760,822 (+) | NCBI | Rnor6.0 | Rnor_6.0 | rn6 | Rnor6.0 | Rnor_6.0 Ensembl | 3 | 111,699,021 - 111,759,911 (+) | Ensembl | Rnor6.0 | | rn6 | Rnor6.0 | Rnor_5.0 | 3 | 118,218,346 - 118,310,451 (+) | NCBI | Rnor5.0 | Rnor_5.0 | rn5 | Rnor5.0 | RGSC_v3.4 | 3 | 106,407,792 - 106,474,833 (+) | NCBI | RGSC3.4 | RGSC_v3.4 | rn4 | RGSC3.4 | Celera | 3 | 105,783,558 - 105,850,744 (+) | NCBI | | Celera | | | Cytogenetic Map | 3 | q35 | NCBI | | | | |
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MGA (Homo sapiens - human) |
Human Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCh38 | 15 | 41,621,224 - 41,769,940 (+) | NCBI | GRCh38 | GRCh38 | hg38 | GRCh38 | GRCh38.p14 Ensembl | 15 | 41,621,134 - 41,773,081 (+) | Ensembl | GRCh38 | | hg38 | GRCh38 | GRCh37 | 15 | 41,913,422 - 42,062,138 (+) | NCBI | GRCh37 | GRCh37 | hg19 | GRCh37 | Build 36 | 15 | 39,739,902 - 39,849,433 (+) | NCBI | NCBI36 | Build 36 | hg18 | NCBI36 | Build 34 | 15 | 39,839,866 - 39,849,431 | NCBI | | | | | Celera | 15 | 18,720,565 - 18,829,777 (+) | NCBI | | Celera | | | Cytogenetic Map | 15 | q15.1 | NCBI | | | | | HuRef | 15 | 18,801,361 - 18,910,462 (+) | NCBI | | HuRef | | | CHM1_1 | 15 | 42,071,104 - 42,180,606 (+) | NCBI | | CHM1_1 | | | T2T-CHM13v2.0 | 15 | 39,427,379 - 39,575,822 (+) | NCBI | | T2T-CHM13v2.0 | | |
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Mga (Mus musculus - house mouse) |
Mouse Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCm39 | 2 | 119,702,974 - 119,800,610 (+) | NCBI | GRCm39 | GRCm39 | mm39 | | GRCm39 Ensembl | 2 | 119,727,709 - 119,800,062 (+) | Ensembl | | GRCm39 Ensembl | | | GRCm38 | 2 | 119,872,503 - 119,970,129 (+) | NCBI | GRCm38 | GRCm38 | mm10 | GRCm38 | GRCm38.p6 Ensembl | 2 | 119,897,228 - 119,969,581 (+) | Ensembl | GRCm38 | | mm10 | GRCm38 | MGSCv37 | 2 | 119,722,964 - 119,795,317 (+) | NCBI | GRCm37 | MGSCv37 | mm9 | NCBIm37 | MGSCv36 | 2 | 119,594,114 - 119,656,406 (+) | NCBI | | MGSCv36 | mm8 | | Celera | 2 | 121,052,811 - 121,127,205 (+) | NCBI | | Celera | | | Cytogenetic Map | 2 | E5 | NCBI | | | | | cM Map | 2 | 59.97 | NCBI | | | | |
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Mga (Chinchilla lanigera - long-tailed chinchilla) |
Chinchilla Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
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ChiLan1.0 Ensembl | NW_004955416 | 8,471,134 - 8,563,842 (+) | Ensembl | ChiLan1.0 | | | | ChiLan1.0 | NW_004955416 | 8,416,236 - 8,566,371 (+) | NCBI | ChiLan1.0 | ChiLan1.0 | | |
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MGA (Pan paniscus - bonobo/pygmy chimpanzee) |
Bonobo Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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NHGRI_mPanPan1-v2 | 16 | 30,860,256 - 31,023,137 (+) | NCBI | | NHGRI_mPanPan1-v2 | | | NHGRI_mPanPan1 | 15 | 35,011,470 - 35,161,947 (+) | NCBI | | NHGRI_mPanPan1 | | | Mhudiblu_PPA_v0 | 15 | 20,560,842 - 20,710,269 (+) | NCBI | Mhudiblu_PPA_v0 | Mhudiblu_PPA_v0 | panPan3 | | PanPan1.1 | 15 | 38,800,567 - 38,948,847 (+) | NCBI | panpan1.1 | PanPan1.1 | panPan2 | | PanPan1.1 Ensembl | 15 | 38,839,708 - 38,948,847 (+) | Ensembl | panpan1.1 | | panPan2 | |
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MGA (Canis lupus familiaris - dog) |
Dog Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
CanFam3.1 | 30 | 8,633,122 - 8,805,822 (+) | NCBI | CanFam3.1 | CanFam3.1 | canFam3 | CanFam3.1 | CanFam3.1 Ensembl | 30 | 8,711,091 - 8,802,324 (+) | Ensembl | CanFam3.1 | | canFam3 | CanFam3.1 | Dog10K_Boxer_Tasha | 30 | 8,692,097 - 8,864,773 (+) | NCBI | | Dog10K_Boxer_Tasha | | | ROS_Cfam_1.0 | 30 | 8,838,572 - 8,940,861 (+) | NCBI | | ROS_Cfam_1.0 | | | ROS_Cfam_1.0 Ensembl | 30 | 8,767,898 - 8,940,656 (+) | Ensembl | | ROS_Cfam_1.0 Ensembl | | | UMICH_Zoey_3.1 | 30 | 8,688,977 - 8,861,620 (+) | NCBI | | UMICH_Zoey_3.1 | | | UNSW_CanFamBas_1.0 | 30 | 8,796,546 - 8,965,625 (+) | NCBI | | UNSW_CanFamBas_1.0 | | | UU_Cfam_GSD_1.0 | 30 | 8,927,629 - 9,100,331 (+) | NCBI | | UU_Cfam_GSD_1.0 | | |
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Mga (Ictidomys tridecemlineatus - thirteen-lined ground squirrel) |
Squirrel Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
---|
HiC_Itri_2 | NW_024408640 | 87,098,470 - 87,226,654 (+) | NCBI | | HiC_Itri_2 | | | SpeTri2.0 Ensembl | NW_004936471 | 4,946,124 - 5,073,849 (+) | Ensembl | SpeTri2.0 | SpeTri2.0 Ensembl | | | SpeTri2.0 | NW_004936471 | 4,946,770 - 5,073,925 (+) | NCBI | SpeTri2.0 | SpeTri2.0 | | SpeTri2.0 |
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MGA (Sus scrofa - pig) |
Pig Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
---|
Sscrofa11.1 Ensembl | 1 | 129,594,795 - 129,697,408 (-) | Ensembl | Sscrofa11.1 | | susScr11 | Sscrofa11.1 | Sscrofa11.1 | 1 | 129,590,645 - 129,697,434 (-) | NCBI | Sscrofa11.1 | Sscrofa11.1 | susScr11 | Sscrofa11.1 | Sscrofa10.2 | 1 | 144,415,283 - 144,467,023 (+) | NCBI | Sscrofa10.2 | Sscrofa10.2 | susScr3 | |
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MGA (Chlorocebus sabaeus - green monkey) |
Green Monkey Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
ChlSab1.1 | 26 | 41,215,424 - 41,381,828 (-) | NCBI | ChlSab1.1 | ChlSab1.1 | chlSab2 | | ChlSab1.1 Ensembl | 26 | 41,218,082 - 41,311,526 (-) | Ensembl | ChlSab1.1 | ChlSab1.1 Ensembl | chlSab2 | | Vero_WHO_p1.0 | NW_023666048 | 99,617,984 - 99,786,145 (+) | NCBI | Vero_WHO_p1.0 | Vero_WHO_p1.0 | | |
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Mga (Heterocephalus glaber - naked mole-rat) |
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