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Gene: Wdr54 (WD repeat domain 54) Rattus norvegicus
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Symbol: Wdr54
Name: WD repeat domain 54
RGD ID: 1561494
Description: Predicted to have protein homodimerization activity. Predicted to be involved in negative regulation of receptor internalization; regulation of MAPK cascade; and regulation of epidermal growth factor receptor signaling pathway. Predicted to localize to vesicle. Orthologous to human WDR54 (WD repeat domain 54); INTERACTS WITH aflatoxin B1; amphetamine; bisphenol A.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: LOC500226; RGD1561494; similar to D3Mm3e; WD repeat-containing protein 54
Orthologs:
Homo sapiens (human) : WDR54 (WD repeat domain 54)  HGNC  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Wdr54 (WD repeat domain 54)
Pan paniscus (bonobo/pygmy chimpanzee) : WDR54 (WD repeat domain 54)
Canis lupus familiaris (dog) : WDR54 (WD repeat domain 54)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Wdr54 (WD repeat domain 54)
Sus scrofa (pig) : WDR54 (WD repeat domain 54)
Chlorocebus sabaeus (African green monkey) : WDR54 (WD repeat domain 54)
Heterocephalus glaber (naked mole-rat) : Wdr54 (WD repeat domain 54)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.04114,847,722 - 114,871,989 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl4114,850,815 - 114,853,868 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_6.0 Ensembl4113,981,653 - 113,988,246 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.04179,436,792 - 179,460,392 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.44117,360,988 - 117,367,581 (-)NCBIRGSC3.4rn4RGSC3.4
Celera4104,649,110 - 104,655,703 (-)NCBICelera
Cytogenetic Map4q34NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
 
More on Wdr54
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 1561494
Created: 2006-02-09
Species: Rattus norvegicus
Last Modified: 2020-08-20
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.