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Gene: Fancf (FA complementation group F) Rattus norvegicus
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Symbol: Fancf
Name: FA complementation group F
RGD ID: 1561456
Description: Predicted to contribute to ubiquitin protein ligase activity. Predicted to be involved in several processes, including ovarian follicle development; protein ubiquitination; and spermatogenesis. Predicted to localize to Fanconi anaemia nuclear complex. Human ortholog(s) of this gene implicated in Fanconi anemia complementation group F; adenocarcinoma in situ; and granulosa cell tumor. Orthologous to human FANCF (FA complementation group F); INTERACTS WITH bisphenol A; endosulfan; 1,2-dimethylhydrazine (ortholog).
Type: protein-coding
RefSeq Status: MODEL
Also known as: Fanconi anemia, complementation group F; LOC499155; RGD1561456; similar to Fanconi anemia, complementation group F
Orthologs:
Homo sapiens (human) : FANCF (FA complementation group F)  HGNC  Alliance
Mus musculus (house mouse) : Fancf (Fanconi anemia, complementation group F)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Fancf (FA complementation group F)
Pan paniscus (bonobo/pygmy chimpanzee) : FANCF (FA complementation group F)
Canis lupus familiaris (dog) : FANCF (FA complementation group F)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Fancf (FA complementation group F)
Sus scrofa (pig) : FANCF (FA complementation group F)
Chlorocebus sabaeus (African green monkey) : FANCF (FA complementation group F)
Heterocephalus glaber (naked mole-rat) : Fancf (FA complementation group F)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.01107,229,516 - 107,232,321 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1107,231,292 - 107,232,305 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01108,272,291 - 108,274,234 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41101,664,895 - 101,666,720 (-)NCBIRGSC3.4rn4RGSC3.4
Celera195,615,737 - 95,618,542 (-)NCBICelera
Cytogenetic Map1q22NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 6.0)
Damaging Variants

Additional Information

External Database Links
Nomenclature History
 
More on Fancf
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 1561456
Created: 2006-02-09
Species: Rattus norvegicus
Last Modified: 2020-08-20
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.