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Gene: Defal1 (defensin alpha-like 1) Rattus norvegicus
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Symbol: Defal1
Name: defensin alpha-like 1
Description: Predicted to be involved in several processes, including innate immune response in mucosa; membrane disruption in other organism; and response to bacterium. Predicted to localize to the extracellular space. Orthologous to human DEFA4 (defensin alpha 4) and DEFA6 (defensin alpha 6); INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine; cadmium dichloride; decabromodiphenyl ether.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: alpha-defensin-related sequence 1; Defa-rs1; defensin alpha-like protein 1; defensin alpha-related sequence 1; rattusin
Orthologs:
No known orthologs. homologs ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.01675,366,925 - 75,367,985 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1675,366,929 - 75,367,906 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01674,984,417 - 74,985,252 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41675,053,699 - 75,054,534 (+)NCBIRGSC3.4rn4RGSC3.4
Celera1668,244,152 - 68,244,987 (+)NCBICelera
Cytogenetic Map16q12.5NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
 
More on Defal1
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 1561398
Created: 2006-02-09
Species: Rattus norvegicus
Last Modified: 2019-11-27
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.