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Gene: Pcbp1 (poly(rC) binding protein 1) Rattus norvegicus
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Symbol: Pcbp1
Name: poly(rC) binding protein 1
Description: Predicted to have DNA-binding transcription factor activity, RNA polymerase II-specific; mRNA binding activity; and sequence-specific single stranded DNA binding activity. Predicted to be involved in positive regulation of transcription by RNA polymerase II and viral RNA genome replication. Predicted to localize to the cytoplasmic ribonucleoprotein granule; cytosol; and nuclear speck. Orthologous to human PCBP1 (poly(rC) binding protein 1); PARTICIPATES IN iron homeostasis pathway; iron storage pathway; spliceosome pathway; INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine; bisphenol A; cadmium dichloride.
Type: protein-coding
RefSeq Status: MODEL
Also known as: LOC500242; poly(rC)-binding protein 1; RGD1561319; similar to Pol(yrC)-binding protein 1 (Alpha-CP1) (hnRNP-E1)
Orthologs:
Homo sapiens (human) : PCBP1 (poly(rC) binding protein 1)  HGNC  Alliance
Mus musculus (house mouse) : Pcbp1 (poly(rC) binding protein 1)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Pcbp1 (poly(rC) binding protein 1)
Pan paniscus (bonobo/pygmy chimpanzee) : PCBP1 (poly(rC) binding protein 1)
Canis lupus familiaris (dog) : PCBP1 (poly(rC) binding protein 1)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Pcbp1 (poly(rC) binding protein 1)
Sus scrofa (pig) : PCBP1 (poly(rC) binding protein 1)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.04118,327,185 - 118,329,223 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.04182,898,435 - 182,899,895 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.44120,719,092 - 120,732,363 (-)NCBIRGSC3.4rn4RGSC3.4
Celera4107,943,493 - 107,944,933 (-)NCBICelera
Cytogenetic Map4q34NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
Molecular Pathway Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)

Sequence

Nucleotide Sequences
Protein Sequences

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
 
More on Pcbp1
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 1561319
Created: 2006-02-09
Species: Rattus norvegicus
Last Modified: 2019-08-20
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.