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Gene: Susd5 (sushi domain containing 5) Rattus norvegicus
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Symbol: Susd5
Name: sushi domain containing 5
RGD ID: 1561132
Description: Predicted to have hyaluronic acid binding activity. Predicted to be involved in Notch signaling pathway. Predicted to localize to integral component of membrane. Orthologous to human SUSD5 (sushi domain containing 5); INTERACTS WITH bisphenol A; C60 fullerene; endosulfan.
Type: protein-coding
RefSeq Status: MODEL
Also known as: LOC301039; RGD1561132; similar to KIAA0527 protein; sushi domain-containing protein 5
Orthologs:
Homo sapiens (human) : SUSD5 (sushi domain containing 5)  HGNC  Alliance
Mus musculus (house mouse) : Susd5 (sushi domain containing 5)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Susd5 (sushi domain containing 5)
Pan paniscus (bonobo/pygmy chimpanzee) : SUSD5 (sushi domain containing 5)
Canis lupus familiaris (dog) : SUSD5 (sushi domain containing 5)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Susd5 (sushi domain containing 5)
Sus scrofa (pig) : SUSD5 (sushi domain containing 5)
Chlorocebus sabaeus (African green monkey) : SUSD5 (sushi domain containing 5)
Heterocephalus glaber (naked mole-rat) : Susd5 (sushi domain containing 5)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.08122,331,489 - 122,370,684 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl8122,331,583 - 122,368,368 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.08121,644,223 - 121,683,500 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.48118,701,744 - 118,739,675 (+)NCBIRGSC3.4rn4RGSC3.4
Celera8113,244,704 - 113,282,733 (+)NCBICelera
Cytogenetic Map8q32NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 6.0)
Damaging Variants

Additional Information

External Database Links
Nomenclature History
 
More on Susd5
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 1561132
Created: 2006-02-09
Species: Rattus norvegicus
Last Modified: 2020-08-20
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.