Submit Data |  Help |  Video Tutorials |  News |  Publications |  FTP Download |  REST API |  Citing RGD |  Contact   
Gene: Klhl42 (kelch-like family, member 42) Rattus norvegicus
Analyze
Symbol: Klhl42
Name: kelch-like family, member 42
Description: Predicted to contribute to ubiquitin-protein transferase activity. Predicted to be involved in proteasome-mediated ubiquitin-dependent protein catabolic process; protein polyubiquitination; and regulation of microtubule-based process. Predicted to localize to the Cul3-RING ubiquitin ligase complex. Orthologous to human KLHL42 (kelch like family member 42); INTERACTS WITH 2,2',5,5'-tetrachlorobiphenyl; 6-propyl-2-thiouracil; bisphenol A.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: kelch domain containing 5; kelch domain-containing protein 5; kelch-like protein 42; Klhdc5; LOC500367; RGD1560924; similar to C230080I20Rik protein
Orthologs:
Homo sapiens (human) : KLHL42 (kelch like family member 42)  HGNC  Alliance
Mus musculus (house mouse) : Klhl42 (kelch-like 42)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Klhl42 (kelch like family member 42)
Pan paniscus (bonobo/pygmy chimpanzee) : KLHL42 (kelch like family member 42)
Canis lupus familiaris (dog) : KLHL42 (kelch like family member 42)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Klhl42 (kelch like family member 42)
Sus scrofa (pig) : KLHL42 (kelch like family member 42)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.04181,481,147 - 181,502,916 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl4181,481,147 - 181,502,916 (+)Ensembl
Rnor_5.04245,631,025 - 245,652,794 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.44184,688,926 - 184,709,859 (+)NCBIRGSC3.4rn4RGSC3.4
Celera4168,498,092 - 168,519,056 (+)NCBICelera
Cytogenetic Map4q44NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
 
More on Klhl42
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 1560924
Created: 2006-02-09
Species: Rattus norvegicus
Last Modified: 2019-08-20
Status: ACTIVE



NHLBI Logo

RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.