Hgsnat (Rattus norvegicus - Norway rat) |
Rat Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCr8 | 16 | 72,807,967 - 72,840,180 (+) | NCBI | | GRCr8 | | | mRatBN7.2 | 16 | 66,105,233 - 66,137,444 (+) | NCBI | mRatBN7.2 | mRatBN7.2 | | | mRatBN7.2 Ensembl | 16 | 66,105,181 - 66,136,138 (+) | Ensembl | | mRatBN7.2 Ensembl | | | UTH_Rnor_SHR_Utx | 16 | 71,384,094 - 71,416,277 (+) | NCBI | Rnor_SHR | UTH_Rnor_SHR_Utx | | | UTH_Rnor_SHRSP_BbbUtx_1.0 | 16 | 74,790,423 - 74,822,606 (+) | NCBI | Rnor_SHRSP | UTH_Rnor_SHRSP_BbbUtx_1.0 | | | UTH_Rnor_WKY_Bbb_1.0 | 16 | 70,030,536 - 70,062,632 (+) | NCBI | Rnor_WKY | UTH_Rnor_WKY_Bbb_1.0 | | | Rnor_6.0 | 16 | 70,876,557 - 70,909,443 (+) | NCBI | Rnor6.0 | Rnor_6.0 | rn6 | Rnor6.0 | Rnor_5.0 | 16 | 70,540,794 - 70,572,512 (+) | NCBI | Rnor5.0 | Rnor_5.0 | rn5 | Rnor5.0 | RGSC_v3.4 | 16 | 70,511,545 - 70,513,470 (+) | NCBI | RGSC3.4 | RGSC_v3.4 | rn4 | RGSC3.4 | Celera | 16 | 64,016,244 - 64,048,685 (+) | NCBI | | Celera | | | Cytogenetic Map | 16 | q12.4 | NCBI | | | | |
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HGSNAT (Homo sapiens - human) |
Human Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCh38 | 8 | 43,140,464 - 43,202,855 (+) | NCBI | GRCh38 | GRCh38 | hg38 | GRCh38 | GRCh38.p14 Ensembl | 8 | 43,140,464 - 43,202,855 (+) | Ensembl | GRCh38 | | hg38 | GRCh38 | GRCh37 | 8 | 42,995,607 - 43,057,998 (+) | NCBI | GRCh37 | GRCh37 | hg19 | GRCh37 | Build 36 | 8 | 43,114,749 - 43,177,127 (+) | NCBI | NCBI36 | Build 36 | hg18 | NCBI36 | Celera | 8 | 41,950,967 - 42,005,677 (+) | NCBI | | Celera | | | Cytogenetic Map | 8 | p11.21-p11.1 | NCBI | | | | | HuRef | 8 | 41,518,326 - 41,580,566 (+) | NCBI | | HuRef | | | CHM1_1 | 8 | 43,042,515 - 43,105,151 (+) | NCBI | | CHM1_1 | | | T2T-CHM13v2.0 | 8 | 43,409,397 - 43,471,962 (+) | NCBI | | T2T-CHM13v2.0 | | |
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Hgsnat (Mus musculus - house mouse) |
Mouse Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCm39 | 8 | 26,432,495 - 26,466,704 (-) | NCBI | GRCm39 | GRCm39 | mm39 | | GRCm39 Ensembl | 8 | 26,434,481 - 26,466,781 (-) | Ensembl | | GRCm39 Ensembl | | | GRCm38 | 8 | 25,944,459 - 25,976,744 (-) | NCBI | GRCm38 | GRCm38 | mm10 | GRCm38 | GRCm38.p6 Ensembl | 8 | 25,944,453 - 25,976,753 (-) | Ensembl | GRCm38 | | mm10 | GRCm38 | MGSCv37 | 8 | 27,054,931 - 27,087,216 (-) | NCBI | GRCm37 | MGSCv37 | mm9 | NCBIm37 | MGSCv36 | 8 | 27,410,004 - 27,412,027 (-) | NCBI | | MGSCv36 | mm8 | | Celera | 8 | 27,412,295 - 27,443,966 (-) | NCBI | | Celera | | | Cytogenetic Map | 8 | A2 | NCBI | | | | | cM Map | 8 | 14.22 | NCBI | | | | |
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Hgsnat (Chinchilla lanigera - long-tailed chinchilla) |
Chinchilla Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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ChiLan1.0 Ensembl | NW_004955457 | 13,349,213 - 13,387,251 (+) | Ensembl | ChiLan1.0 | | | | ChiLan1.0 | NW_004955457 | 13,351,963 - 13,386,521 (+) | NCBI | ChiLan1.0 | ChiLan1.0 | | |
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HGSNAT (Pan paniscus - bonobo/pygmy chimpanzee) |
Bonobo Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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NHGRI_mPanPan1-v2 | 7 | 61,597,533 - 61,657,575 (+) | NCBI | | NHGRI_mPanPan1-v2 | | | NHGRI_mPanPan1 | 8 | 37,313,523 - 37,373,552 (+) | NCBI | | NHGRI_mPanPan1 | | | Mhudiblu_PPA_v0 | 8 | 42,388,406 - 42,448,466 (+) | NCBI | Mhudiblu_PPA_v0 | Mhudiblu_PPA_v0 | panPan3 | | PanPan1.1 | 8 | 39,832,143 - 39,888,948 (+) | NCBI | panpan1.1 | PanPan1.1 | panPan2 | |
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HGSNAT (Canis lupus familiaris - dog) |
Dog Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
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CanFam3.1 | 16 | 22,640,912 - 22,683,733 (-) | NCBI | CanFam3.1 | CanFam3.1 | canFam3 | CanFam3.1 | CanFam3.1 Ensembl | 16 | 22,642,289 - 22,683,879 (-) | Ensembl | CanFam3.1 | | canFam3 | CanFam3.1 | Dog10K_Boxer_Tasha | 16 | 23,146,111 - 23,188,937 (-) | NCBI | | Dog10K_Boxer_Tasha | | | ROS_Cfam_1.0 | 16 | 24,392,606 - 24,435,430 (-) | NCBI | | ROS_Cfam_1.0 | | | ROS_Cfam_1.0 Ensembl | 16 | 24,392,606 - 24,435,665 (-) | Ensembl | | ROS_Cfam_1.0 Ensembl | | | UMICH_Zoey_3.1 | 16 | 22,760,972 - 22,803,889 (-) | NCBI | | UMICH_Zoey_3.1 | | | UNSW_CanFamBas_1.0 | 16 | 23,325,689 - 23,368,698 (-) | NCBI | | UNSW_CanFamBas_1.0 | | | UU_Cfam_GSD_1.0 | 16 | 23,376,944 - 23,419,965 (-) | NCBI | | UU_Cfam_GSD_1.0 | | |
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Hgsnat (Ictidomys tridecemlineatus - thirteen-lined ground squirrel) |
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LOC100154844 (Sus scrofa - pig) |
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HGSNAT (Chlorocebus sabaeus - green monkey) |
Green Monkey Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
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ChlSab1.1 | 8 | 41,146,280 - 41,196,192 (+) | NCBI | ChlSab1.1 | ChlSab1.1 | chlSab2 | | ChlSab1.1 Ensembl | 8 | 41,146,483 - 41,197,518 (+) | Ensembl | ChlSab1.1 | ChlSab1.1 Ensembl | chlSab2 | | Vero_WHO_p1.0 | NW_023666052 | 551,844 - 602,374 (-) | NCBI | Vero_WHO_p1.0 | Vero_WHO_p1.0 | | |
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Hgsnat (Heterocephalus glaber - naked mole-rat) |
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