Submit Data |  Help |  Video Tutorials |  News |  Publications |  FTP Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes QTLs Strains Markers Genome Information Ontologies Cell Lines References FTP Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) RatMine GViewer (Genome Viewer) Overgo Probe Designer ACP Haplotyper Genome Scanner
Aging & Age-Related Disease Cancer Cardiovascular Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Genetic Models PhenoMiner (Quantitative Phenotypes) Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes GERRC (Gene Editing Rat Resource Center) Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Poster Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources
Gene: Tfdp1 (transcription factor Dp-1) Rattus norvegicus
Analyze
Symbol: Tfdp1
Name: transcription factor Dp-1
Description: Predicted to contribute to DNA-binding transcription activator activity, RNA polymerase II-specific and RNA polymerase II regulatory region sequence-specific DNA binding activity. Predicted to be involved in several processes, including anoikis; negative regulation of fat cell proliferation; and regulation of cellular macromolecule biosynthetic process. Predicted to localize to the RNA polymerase II transcription factor complex; cytosol; and nucleoplasm. Orthologous to several human genes including TFDP1 (transcription factor Dp-1); PARTICIPATES IN cell cycle pathway, mitotic; transforming growth factor-beta superfamily mediated signaling pathway; INTERACTS WITH bisphenol A; finasteride; flutamide.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: hypothetical protein LOC361178; MGC112830; similar to transcription factor; uncharacterized protein LOC361178
Orthologs:
Homo sapiens (human) : TFDP1 (transcription factor Dp-1)  HGNC  Alliance
Mus musculus (house mouse) : Tfdp1 (transcription factor Dp 1)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Tfdp1 (transcription factor Dp-1)
Pan paniscus (bonobo/pygmy chimpanzee) : TFDP1 (transcription factor Dp-1)
Canis lupus familiaris (dog) : TFDP1 (transcription factor Dp-1)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Tfdp1 (transcription factor Dp-1)
Sus scrofa (pig) : TFDP1 (transcription factor Dp-1)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.01681,088,642 - 81,127,244 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1681,089,292 - 81,127,257 (+)Ensembl
Rnor_5.01680,578,421 - 80,615,804 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41681,018,040 - 81,056,049 (-)NCBIRGSC3.4rn4RGSC3.4
Celera1673,969,240 - 74,007,155 (-)NCBICelera
Cytogenetic Map16q12.5NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model

Annotation    (Toggle Annotation Detail/Summary View)

Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
Molecular Pathway Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome

Strain Variation

Strain Sequence Variants (Rnor 6.0)
Damaging Variants

Additional Information

External Database Links
Nomenclature History
  
More on Tfdp1
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 1560344
Created: 2006-02-09
Species: Rattus norvegicus
Last Modified: 2019-08-20
Status: ACTIVE



Contact Us |  About Us |  License CC BY 4.0 |  Legal Disclaimer |  © Medical College of Wisconsin
NHLBI Logo

RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.