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Gene: Ccdc107 (coiled-coil domain containing 107) Rattus norvegicus
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Symbol: Ccdc107
Name: coiled-coil domain containing 107
RGD ID: 1560252
Description: Orthologous to human CCDC107 (coiled-coil domain containing 107); INTERACTS WITH 1,3-dinitrobenzene; 2,3,7,8-tetrachlorodibenzodioxine; 2,3,7,8-Tetrachlorodibenzofuran.
Type: protein-coding
RefSeq Status: VALIDATED
Also known as: coiled-coil domain-containing protein 107; LOC313496; RGD1560252; similar to hypothetical protein MGC31967
Orthologs:
Homo sapiens (human) : CCDC107 (coiled-coil domain containing 107)  HGNC  Alliance
Mus musculus (house mouse) : Ccdc107 (coiled-coil domain containing 107)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Ccdc107 (coiled-coil domain containing 107)
Pan paniscus (bonobo/pygmy chimpanzee) : CCDC107 (coiled-coil domain containing 107)
Canis lupus familiaris (dog) : CCDC107 (coiled-coil domain containing 107)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Ccdc107 (coiled-coil domain containing 107)
Sus scrofa (pig) : CCDC107 (coiled-coil domain containing 107)
Chlorocebus sabaeus (African green monkey) : CCDC107 (coiled-coil domain containing 107)
Heterocephalus glaber (naked mole-rat) : Ccdc107 (coiled-coil domain containing 107)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.0558,995,211 - 58,998,620 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl558,995,249 - 58,997,953 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0563,519,835 - 63,523,212 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4559,973,255 - 59,975,669 (+)NCBIRGSC3.4rn4RGSC3.4
Celera556,330,086 - 56,333,495 (+)NCBICelera
Cytogenetic Map5q22NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 6.0)
Damaging Variants

Additional Information

External Database Links
Nomenclature History
 
More on Ccdc107
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 1560252
Created: 2006-02-09
Species: Rattus norvegicus
Last Modified: 2020-08-20
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.