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Gene: Rbm46 (RNA binding motif protein 46) Rattus norvegicus

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Symbol:

Rbm46

Name:

RNA binding motif protein 46

RGD ID:

1560205

Description:

Predicted to enable mRNA binding activity. Predicted to be involved in several processes, including cell cycle switching, mitotic to meiotic cell cycle; meiotic nuclear division; and spermatid differentiation. Predicted to act upstream of or within mRNA stabilization and trophectodermal cell differentiation. Predicted to be located in cytoplasm. Predicted to be active in nucleus. Orthologous to human RBM46 (RNA binding motif protein 46); INTERACTS WITH 4,4'-diaminodiphenylmethane; bisphenol A; thioacetamide.

Type:

protein-coding

RefSeq Status:

PROVISIONAL

Previously known as:

LOC310548; probable RNA-binding protein 46; RGD1560205; similar to hypothetical protein MGC27016

RGD Orthologs

Alliance Orthologs

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	RBM46 (RNA binding motif protein 46)	HGNC	Ensembl, HomoloGene, Inparanoid, NCBI, OMA, OrthoDB, OrthoMCL, Panther, PhylomeDB, Treefam
Mus musculus (house mouse):	Rbm46 (RNA binding motif protein 46)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chinchilla lanigera (long-tailed chinchilla):	Rbm46 (RNA binding motif protein 46)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):	RBM46 (RNA binding motif protein 46)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Canis lupus familiaris (dog):	RBM46 (RNA binding motif protein 46)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):	Rbm46 (RNA binding motif protein 46)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Sus scrofa (pig):	RBM46 (RNA binding motif protein 46)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):	RBM46 (RNA binding motif protein 46)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):	Rbm46 (RNA binding motif protein 46)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Alliance orthologs ³
Homo sapiens (human):	RBM46 (RNA binding motif protein 46)	Alliance	DIOPT (Ensembl Compara\|HGNC\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Mus musculus (house mouse):	Rbm46 (RNA binding motif protein 46)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Danio rerio (zebrafish):	rbm46 (RNA binding motif protein 46)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Xenopus tropicalis (tropical clawed frog):	rbm46	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)

Latest Assembly:

GRCr8 - GRCr8 Assembly

Position:

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	2	170,496,383 - 170,548,101 (-)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	2	170,496,142 - 170,540,068 (-)	Ensembl				GRCr8
mRatBN7.2	2	168,198,324 - 168,242,011 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	2	168,198,463 - 168,242,011 (-)	Ensembl				mRatBN7.2
UTH_Rnor_SHR_Utx	2	175,388,944 - 175,432,055 (-)	NCBI	UTH_Rnor_SHR_Utx	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	2	173,409,876 - 173,452,987 (-)	NCBI	UTH_Rnor_SHRSP_BbbUtx_1.0	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	2	168,011,294 - 168,054,403 (-)	NCBI	UTH_Rnor_WKY_Bbb_1.0	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	2	181,828,931 - 181,874,223 (-)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	2	181,831,244 - 181,874,223 (-)	Ensembl			rn6	Rnor6.0
Rnor_5.0	2	201,202,750 - 201,288,843 (-)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	2	174,571,323 - 174,614,302 (-)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	2	162,225,766 - 162,268,745 (-)	NCBI		Celera
Cytogenetic Map	2	q34	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Annotation Click to see Annotation Detail View

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

4,4'-diaminodiphenylmethane (EXP)

4-hydroxyphenyl retinamide (ISO)

aflatoxin B1 (ISO)

aristolochic acid A (ISO)

benzo[a]pyrene (ISO)

bisphenol A (EXP,ISO)

cadmium dichloride (ISO)

genistein (ISO)

okadaic acid (ISO)

thioacetamide (EXP)

titanium dioxide (ISO)

valproic acid (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

cell cycle switching, mitotic to meiotic cell cycle (IEA,ISO)

cell differentiation (IEA)

female meiotic nuclear division (IEA,ISO)

male meiotic nuclear division (IEA,ISO)

meiotic cell cycle (IEA)

mRNA stabilization (IEA,ISO)

oogenesis (IEA,ISO)

spermatid differentiation (IEA,ISO)

spermatogenesis (IEA,ISO)

trophectodermal cell differentiation (IEA,ISO)

Cellular Component

cytoplasm (IEA,ISO)

nucleus (IBA,IEA,ISO)

Molecular Function

mRNA binding (IBA)

nucleic acid binding (IEA)

protein binding (ISO)

RNA binding (IEA,ISO)

References

References - curated

#	Reference Title	Reference Citation
1.	Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium.	Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2.	ClinVar Automated Import and Annotation Pipeline	RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
3.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions

Additional References at PubMed

PMID:25397698

Genomics

Comparative Map Data

Rbm46
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	2	170,496,383 - 170,548,101 (-)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	2	170,496,142 - 170,540,068 (-)	Ensembl				GRCr8
mRatBN7.2	2	168,198,324 - 168,242,011 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	2	168,198,463 - 168,242,011 (-)	Ensembl				mRatBN7.2
UTH_Rnor_SHR_Utx	2	175,388,944 - 175,432,055 (-)	NCBI	UTH_Rnor_SHR_Utx	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	2	173,409,876 - 173,452,987 (-)	NCBI	UTH_Rnor_SHRSP_BbbUtx_1.0	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	2	168,011,294 - 168,054,403 (-)	NCBI	UTH_Rnor_WKY_Bbb_1.0	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	2	181,828,931 - 181,874,223 (-)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	2	181,831,244 - 181,874,223 (-)	Ensembl			rn6	Rnor6.0
Rnor_5.0	2	201,202,750 - 201,288,843 (-)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	2	174,571,323 - 174,614,302 (-)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	2	162,225,766 - 162,268,745 (-)	NCBI		Celera
Cytogenetic Map	2	q34	NCBI

RBM46
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	4	154,781,272 - 154,828,813 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	4	154,781,213 - 154,828,813 (+)	Ensembl			hg38	GRCh38
GRCh37	4	155,702,424 - 155,749,965 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	4	155,921,950 - 155,969,415 (+)	NCBI	Build 36	Build 36	hg18	NCBI36
Celera	4	153,033,415 - 153,080,956 (+)	NCBI		Celera
Cytogenetic Map	4	q32.1	NCBI
HuRef	4	151,443,108 - 151,490,546 (+)	NCBI		HuRef
CHM1_1	4	155,680,305 - 155,727,841 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	4	158,113,066 - 158,160,632 (+)	NCBI		T2T-CHM13v2.0

Rbm46
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	3	82,743,828 - 82,783,828 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	3	82,744,535 - 82,783,790 (-)	Ensembl		GRCm39 Ensembl		GRCm39
GRCm38	3	82,836,521 - 82,876,512 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	3	82,837,228 - 82,876,483 (-)	Ensembl			mm10	GRCm38
MGSCv37	3	82,641,155 - 82,680,405 (-)	NCBI	MGSCv37	MGSCv37	mm9	NCBIm37
MGSCv36	3	82,923,160 - 82,962,410 (-)	NCBI		MGSCv36	mm8
Celera	3	82,847,962 - 82,887,223 (-)	NCBI		Celera
Cytogenetic Map	3	E3	NCBI
cM Map	3	36.75	NCBI

Rbm46
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0	NW_004955471	12,096,400 - 12,167,536 (-)	NCBI	ChiLan1.0	ChiLan1.0

RBM46
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	3	152,694,721 - 152,742,344 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	4	153,050,034 - 153,097,671 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	4	147,148,767 - 147,196,342 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	4	158,966,658 - 159,014,240 (+)	NCBI	PanPan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	4	158,966,658 - 159,014,240 (+)	Ensembl			panPan2	panpan1.1

RBM46
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	15	52,427,852 - 52,478,953 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	15	52,441,960 - 52,477,453 (+)	Ensembl			canFam3	CanFam3.1
Dog10K_Boxer_Tasha	15	52,772,405 - 52,823,290 (+)	NCBI	Dog10K_Boxer_Tasha	Dog10K_Boxer_Tasha
ROS_Cfam_1.0	15	53,114,305 - 53,165,252 (+)	NCBI	ROS_Cfam_1.0	ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	15	53,127,875 - 53,163,746 (+)	Ensembl				ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	15	52,368,921 - 52,419,786 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	15	52,474,761 - 52,525,583 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	15	52,789,979 - 52,840,873 (+)	NCBI	UU_Cfam_GSD_1.0	UU_Cfam_GSD_1.0

Rbm46
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024405301	37,972,056 - 38,014,878 (-)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936576	1,532,036 - 1,574,858 (+)	Ensembl		SpeTri2.0 Ensembl
SpeTri2.0	NW_004936576	1,532,036 - 1,574,858 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

RBM46
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	8	74,337,319 - 74,382,515 (-)	Ensembl			susScr11	Sscrofa11.1
Sscrofa11.1	8	74,337,324 - 74,383,044 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	8	78,635,269 - 78,680,980 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

RBM46
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	7	101,330,930 - 101,381,920 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	7	101,348,421 - 101,381,184 (+)	Ensembl		ChlSab1.1 Ensembl	chlSab2	Vervet-AGM
Vero_WHO_p1.0	NW_023666037	80,986,681 - 81,036,627 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Rbm46
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla 1.0	NW_004624848	3,482,539 - 3,532,577 (-)	NCBI	HetGla 1.0	HetGla 1.0	hetGla2

Variants

Variants in Rbm46
279 total Variants

miRNA Target Status (No longer updated)

Predicted Target Of

	Summary Value
Count of predictions:	145
Count of miRNA genes:	127
Interacting mature miRNAs:	134
Transcripts:	ENSRNOT00000035846
Prediction methods:	Microtar, Miranda, Rnahybrid, Targetscan
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

QTLs in Region (GRCr8)

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
1358356	Srcrt1	Stress Responsive Cort QTL1	3.66		blood corticosterone amount (VT:0005345)	plasma corticosterone level (CMO:0001173)	2	163997722	225110681	Rat
1578648	Bss11	Bone structure and strength QTL 11	4.7		femur morphology trait (VT:0000559)	femoral neck cortical cross-sectional area (CMO:0001702)	2	169358774	214358774	Rat
631566	Bp90	Blood pressure QTL 90		0.0001	arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	2	149957381	221199885	Rat
1298074	Bp164	Blood pressure QTL 164		0.003	arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	2	44537979	205135428	Rat
1354648	Bp239	Blood pressure QTL 239		0.001	arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	2	67845370	229470703	Rat
1354649	Kidm17	Kidney mass QTL 17	2.9		kidney mass (VT:0002707)	calculated kidney weight (CMO:0000160)	2	83465462	229820014	Rat
10755499	Bp389	Blood pressure QTL 389	2.61		arterial blood pressure trait (VT:2000000)	diastolic blood pressure (CMO:0000005)	2	20695736	231474293	Rat
1298076	Bp166	Blood pressure QTL 166		0.0009	arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	2	138595962	205135428	Rat
1581576	Pur7	Proteinuria QTL 7		0.0001	urine total protein amount (VT:0000032)	urine total protein excretion rate (CMO:0000756)	2	80396178	220931218	Rat
152025245	Scl81	Serum cholesterol level QTL 81	3.49		blood cholesterol amount (VT:0000180)		2	124537199	209621565	Rat
1581578	Cm49	Cardiac mass QTL 49	4.9	0.01	heart left ventricle mass (VT:0007031)	heart left ventricle weight to body weight ratio (CMO:0000530)	2	145807215	220931416	Rat
631198	Cm22	Cardiac mass QTL 22	4.3	0.0008	heart left ventricle mass (VT:0007031)	heart left ventricle weight to body weight ratio (CMO:0000530)	2	78269809	208420281	Rat
1554319	Bmd2	Bone mineral density QTL 2	13.4	0.0001	lumbar vertebra area (VT:0010570)	lumbar vertebra cross-sectional area (CMO:0001689)	2	122597372	215234002	Rat
12879836	Kidm61	Kidney mass QTL 61		0.001	kidney mass (VT:0002707)	both kidneys wet weight to body weight ratio (CMO:0000340)	2	154723085	199723085	Rat
1581569	Uae32	Urinary albumin excretion QTL 32		0.0001	urine protein amount (VT:0005160)	urine albumin excretion rate (CMO:0000757)	2	80396178	220931218	Rat
10043136	Iddm54	Insulin dependent diabetes mellitus QTL 54	3.4	0.0001	blood glucose amount (VT:0000188)	age at onset/diagnosis of type 1 diabetes mellitus (CMO:0001140)	2	145807215	190807215	Rat
12879837	Am2	Aortic mass QTL 2		0.001	aorta mass (VT:0002845)	aorta weight to aorta length to body weight ratio (CMO:0002722)	2	154723085	199723085	Rat
10043139	Iddm55	Insulin dependent diabetes mellitus QTL 55	3.1	0.0001	blood glucose amount (VT:0000188)	age at onset/diagnosis of type 1 diabetes mellitus (CMO:0001140)	2	150313808	195313808	Rat
12879838	Cm86	Cardiac mass QTL 86		0.002	heart left ventricle mass (VT:0007031)	heart left ventricle weight to body weight ratio (CMO:0000530)	2	154723085	199723085	Rat
1302793	Bw16	Body weight QTL 16	5	0.0001	body mass (VT:0001259)	body weight (CMO:0000012)	2	159440891	205135267	Rat
12879839	Cm85	Cardiac mass QTL 85		0.001	heart mass (VT:0007028)	heart wet weight to body weight ratio (CMO:0002408)	2	154723085	199723085	Rat
1358900	Bw48	Body weight QTL 48	4.88		body mass (VT:0001259)	body weight (CMO:0000012)	2	159440891	220931218	Rat
12879845	Cm89	Cardiac mass QTL 89		0.008	heart left ventricle mass (VT:0007031)	heart left ventricle weight to body weight ratio (CMO:0000530)	2	154723085	178247591	Rat
1359030	Bp277	Blood pressure QTL 277			arterial blood pressure trait (VT:2000000)	diastolic blood pressure (CMO:0000005)	2	143565208	188565208	Rat
12879846	Cm90	Cardiac mass QTL 90		0.011	heart right ventricle mass (VT:0007033)	heart right ventricle weight to body weight ratio (CMO:0000914)	2	154723085	178247591	Rat
12879847	Am4	Aortic mass QTL 4		0.001	aorta mass (VT:0002845)	aorta weight to aorta length to body weight ratio (CMO:0002722)	2	154723085	178247591	Rat
1331760	Bp206	Blood pressure QTL 206	3.62454		arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	2	4265106	205135428	Rat
12879840	Bw179	Body weight QTL 179		0.005	body mass (VT:0001259)	body weight (CMO:0000012)	2	154723085	199723085	Rat
1581502	Esta3	Estrogen-induced thymic atrophy QTL 3			thymus mass (VT:0004954)	thymus wet weight (CMO:0000855)	2	139067258	192287892	Rat
1359032	Hrtrt18	Heart rate QTL 18			heart pumping trait (VT:2000009)	heart rate (CMO:0000002)	2	159440760	195313808	Rat
2301966	Bp322	Blood pressure QTL 322	3.58		arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	2	144882354	205135428	Rat
1298080	Bp163	Blood pressure QTL 163		0.02	arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	2	67845182	205135428	Rat
1357991	Ael2	Aortic elastin QTL 2	4.2	0.000071	aorta elastin amount (VT:0003905)	aortic elastin	2	169227906	214227906	Rat
8662832	Vetf7	Vascular elastic tissue fragility QTL 7	3.5		aorta elastin amount (VT:0003905)	aorta wall extracellular elastin dry weight to aorta wall dry weight ratio (CMO:0002002)	2	83400752	223709938	Rat
1298085	Bp165	Blood pressure QTL 165		0.0006	arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	2	44537979	205135428	Rat
1359022	Ppulsi1	Prepulse inhibition QTL 1	3.63		prepulse inhibition trait (VT:0003088)	acoustic startle response measurement (CMO:0001519)	2	139067258	184067258	Rat
1641891	Alcrsp17	Alcohol response QTL 17			response to alcohol trait (VT:0010489)	duration of loss of righting reflex (CMO:0002289)	2	151869660	251712708	Rat
724534	Uae6	Urinary albumin excretion QTL 6	10		urine albumin amount (VT:0002871)	urine albumin level (CMO:0000130)	2	80396034	220931416	Rat
61374	Edpm2	Estrogen-dependent pituitary mass QTL 2	4.42	0.86	pituitary gland mass (VT:0010496)	pituitary gland wet weight (CMO:0000853)	2	78269809	205135428	Rat
8662843	Vetf9	Vascular elastic tissue fragility QTL 9	2.05		thoracic aorta molecular composition trait (VT:0010568)	aorta wall extracellular elastin dry weight to aorta wall extracellular collagen weight ratio (CMO:0002003)	2	159440760	228950743	Rat
2301415	Cm67	Cardiac mass QTL 67		0.003	heart mass (VT:0007028)	heart wet weight to body weight ratio (CMO:0002408)	2	154723085	178247591	Rat
1331794	Bp202	Blood pressure QTL 202	3.66819		arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	2	143344967	251712708	Rat
71113	Cari2	Carrageenan-induced inflammation QTL 2	2.7	0.009	hypodermis integrity trait (VT:0010550)	inflammatory exudate volume (CMO:0001429)	2	143746578	205135428	Rat
1331805	Cm29	Cardiac mass QTL 29	3.50746		heart mass (VT:0007028)	heart wet weight (CMO:0000069)	2	143344967	251712708	Rat
11565180	Kidm56	Kidney mass QTL 56		0.003	kidney mass (VT:0002707)	both kidneys wet weight to body weight ratio (CMO:0000340)	2	154723085	178247591	Rat
634308	Sach6	Saccharin preference QTL 6	4.9		taste sensitivity trait (VT:0001986)	saccharin intake volume to total fluid intake volume ratio (CMO:0001601)	2	114384617	215381366	Rat
1598805	Memor8	Memory QTL 8	3		exploratory behavior trait (VT:0010471)	average horizontal distance between subject and target during voluntary locomotion in an experimental apparatus (CMO:0002674)	2	150096616	195096616	Rat
11565181	Bw176	Body weight QTL 176		0.002	body mass (VT:0001259)	body weight (CMO:0000012)	2	154723085	178247591	Rat
1358917	Cm42	Cardiac mass QTL 42	2.82		heart mass (VT:0007028)	heart weight to body weight ratio (CMO:0000074)	2	27148328	206613235	Rat
724568	Uae13	Urinary albumin excretion QTL 13	4.4		urine albumin amount (VT:0002871)	urine albumin excretion rate (CMO:0000757)	2	145306936	212705578	Rat
1358913	Cm41	Cardiac mass QTL 41	2.73		heart mass (VT:0007028)	heart weight to body weight ratio (CMO:0000074)	2	27148328	206613235	Rat
1300165	Rf9	Renal function QTL 9	3.28		kidney glomerulus integrity trait (VT:0010546)	index of glomerular damage (CMO:0001135)	2	113746222	205135428	Rat
61401	Niddm2	Non-insulin dependent diabetes mellitus QTL 2	4.54		blood glucose amount (VT:0000188)	blood glucose level (CMO:0000046)	2	147287892	192287892	Rat
631507	Bp105	Blood pressure QTL 105		0.001	arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	2	114384617	215381366	Rat
1641925	Alcrsp2	Alcohol response QTL 2			response to alcohol trait (VT:0010489)	duration of loss of righting reflex (CMO:0002289)	2	151869660	223841096	Rat
1354609	Niddm62	Non-insulin dependent diabetes mellitus QTL 62	4.72	0.000006	insulin secretion trait (VT:0003564)	plasma insulin level (CMO:0000342)	2	117415288	205135428	Rat
631520	Bp73	Blood pressure QTL 73		0.0001	arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	2	149806826	170653323	Rat
1598833	Bp295	Blood pressure QTL 295	3.5		arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	2	150096616	195096616	Rat
1354622	Kidm16	Kidney mass QTL 16	3		kidney mass (VT:0002707)	left kidney wet weight (CMO:0000083)	2	83465462	225110681	Rat
631266	Bp132	Blood pressure QTL 132		0.0005	arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	2	47856345	205135428	Rat
7488927	Bp365	Blood pressure QTL 365		0.008	arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	2	165453811	210453811	Rat
7488925	Bp364	Blood pressure QTL 364		0.001	arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	2	163253030	208253030	Rat
2293843	Kiddil6	Kidney dilation QTL 6	3.1		kidney pelvis morphology trait (VT:0004194)	hydronephrosis severity score (CMO:0001208)	2	44537979	184731399	Rat
2306901	Bp337	Blood pressure QTL 337		0.01	arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	2	166372086	229820014	Rat
152025206	Hrtrt23	Heart rate QTL 23	5.98		heart pumping trait (VT:2000009)		2	30219200	171802126	Rat
1354605	Rf48	Renal function QTL 48	2.9		blood creatinine amount (VT:0005328)	plasma creatinine level (CMO:0000537)	2	76328396	209350714	Rat
6903312	Bw112	Body weight QTL 112	3.2	0.0013	body mass (VT:0001259)	body weight (CMO:0000012)	2	145807215	173074435	Rat
152025204	Hrtrt22	Heart rate QTL 22	5.6		heart pumping trait (VT:2000009)		2	30219200	171802126	Rat

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Download All Expressed Objects for this Gene

alimentary part of gastrointestinal system	appendage	circulatory system	ectoderm	endocrine system	endoderm	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	mesenchyme	mesoderm	musculoskeletal system	nervous system	renal system	reproductive system	respiratory system	sensory system	visual system
16	11	64	144	91	90	59	25	59	6	274	118	7	124	73	92	31	15	15

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_001135717	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006232530	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017590872	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017590873	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017590874	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039102296	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039102297	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063281816	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063281817	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063281818	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	CH473976	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAXUCZ010000002	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSRNOT00000035846 ⟹ ENSRNOP00000031755

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	2	170,502,266 - 170,540,068 (-)	Ensembl
mRatBN7.2 Ensembl	2	168,200,243 - 168,242,011 (-)	Ensembl
Rnor_6.0 Ensembl	2	181,831,244 - 181,874,223 (-)	Ensembl

Ensembl Acc Id:

ENSRNOT00000097000 ⟹ ENSRNOP00000081781

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	2	168,226,748 - 168,242,011 (-)	Ensembl

Ensembl Acc Id:

ENSRNOT00000098771 ⟹ ENSRNOP00000094048

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	2	170,497,301 - 170,540,068 (-)	Ensembl
mRatBN7.2 Ensembl	2	168,199,945 - 168,242,011 (-)	Ensembl

Ensembl Acc Id:

ENSRNOT00000116504 ⟹ ENSRNOP00000089919

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	2	170,496,142 - 170,540,068 (-)	Ensembl
mRatBN7.2 Ensembl	2	168,198,463 - 168,242,011 (-)	Ensembl

RefSeq Acc Id:

NM_001135717 ⟹ NP_001129189

RefSeq Status:

PROVISIONAL

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	2	170,497,089 - 170,540,068 (-)	NCBI
mRatBN7.2	2	168,199,030 - 168,242,011 (-)	NCBI
Rnor_6.0	2	181,831,244 - 181,874,223 (-)	NCBI
Rnor_5.0	2	201,202,750 - 201,288,843 (-)	NCBI
RGSC_v3.4	2	174,571,323 - 174,614,302 (-)	RGD
Celera	2	162,225,766 - 162,268,745 (-)	RGD

Sequence:

show sequence

GAGGCTCCGAGGCACGAGGACTGCACGAGCGCCACTGGCCACGCCCTGCCCCGTCCGGCCCCGC
GGCGACTCCTCTGGCCACCGCTTCCGCCCACAGCGCTGATCCAAAGCTCTGGCGGCGGTTTGTG
CTCGTTGGTCCAGGGATTTTAGGTCTGGCCTTTGAAGACCCGACGGGGAATTGCAGCCATGAAC
GAAGAGAACACTGATGGAACAAATGGATGCAGTAAAGTACGCACTGGCACTCAGAATGAAGCCG
CATTGCTGGCTCTGATGGAAAAGACTGGCTACAACATGGTCCAAGAAAATGGGCAAAGGAAATT
TGGTGGTCCTCCTCCAGGTTGGGAAGGTCCACCTCCCCCTAGAGGTTGTGAAGTTTTTGTTGGA
AAAATACCTCGTGATATGTATGAAGATGAATTGGTTCCTGTATTTGAAAGAGCTGGGAAGATAT
ATGAATTTCGACTGATGATGGAATTTAGTGGTGAAAATAGAGGTTATGCTTTCGTGATGTATAC
TACTAAAGAAGAAGCTCAATTAGCCATCCGGATTCTTAACAATTATGAGATTCGACCTGGGAAG
TTTATTGGTGTGTGTGTAAGCTTGGATAATTGCAGATTATTTATTGGAGCAATTCCCAAAGAAA
AGAAAAAGGAAGAAATTTTGGATGAAATGAAGAAAGTTACAGAAGGTGTTGTAGATGTGATTGT
TTATCCAAGTGCAACTGACAAAACCAAGAACCGCGGTTTTGCATTTGTTGAGTATGAGTCTCAC
AGAGCTGCTGCTATGGCCAGGAGAAAGCTGATTCCAGGAACATTTCAACTCTGGGGCCACACCA
TTCAGGTAGATTGGGCTGATCCAGAGAAAGAAGTTGATGAGGAAACCATGCAGAGAGTTAAAGT
TCTCTATGTAAGAAATCTAATGATCTCAACCACAGAGGAAACAATTAAAGCAGAATTCAATAAG
TTCAAGCCTGGTGCAGTGGAACGAGTAAAGAAACTTAGAGATTATGCATTCGTTCACTTTTTCA
ACCGGGAAGATGCAGTGGCTGCTATGTCTGTTATGAATGGAAAATGCATTGATGGAGCCAGTAT
TGAGGTAACCCTGGCAAAGCCAGTAAATAAAGAAAATACTTGGCGACAGCATCTTAATGGCCAG
ATCAGCCCCAATTCAGAAAACCTACTTGTTTATGCTAACAAGGAAGAGAGTCACTCCAAAAGTC
TAGGCAAGCCACCAACTCTCCCCACGCGTCTCAATGGTCAGCATAGTCCAAGCCCCCCTGAGAT
TGAAAGATGTACTTATCCTTTTTTTCCTGGAACAAAGCTTACCCCAATTAGTATGTATTCTTTA
AAATCCAATCATTTTAATTCTGCAGTGATGCATTTGGATTATTACTGCAACAAAAATAATTGGG
CACCACCAGAATATTATTTATATTCAACAACCAGTCAGGATGGAAAAGTACTCTTGGTGTATAA
AATAGTTATTCCTGCAATTGCAAATGGATCCCAGAGTTACTTCATGCCAGATAAACTCTGCACA
ACGCTGGAGGATGCAAAGGAACTGGCAGCTCAGTTTACACTGCTTCATTTGGACTACAATTTCC
GTCGCAGCTCAATAAATAGTCTTTCCCCTGTTAGCGCTACCCTCTCTACTGGGACACCCAGCGT
GCTTCCTTATACTTCAAGGCCTTATTCTTATCCAAGCTATCCCTTGTCACCAACAATATCACTT
GCTAATGGCAGCCATGTTGGACAACGACTATATATCTCCAATCAGGCCTCATTCTTCTGA

hide sequence

RefSeq Acc Id:

XM_006232530 ⟹ XP_006232592

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	2	170,496,383 - 170,540,032 (-)	NCBI
mRatBN7.2	2	168,198,324 - 168,241,992 (-)	NCBI
Rnor_6.0	2	181,828,931 - 181,874,187 (-)	NCBI
Rnor_5.0	2	201,202,750 - 201,288,843 (-)	NCBI

Sequence:

show sequence

GGCCACGCCCTGCCCCGTCCGGCCCCGCGGCGACTCCTCTGGCCACCGCTTCCGCCCACAGCGC
TGATCCAAAGCTCTGGCGGCGGTTTGTGCTCGTTGGTCCAGGGATTTTAGGTCTGGCCTTTGAA
GACCCGACGGGGAATTGCAGCCATGAACGAAGAGAACACTGATGGAACAAATGGATGCAGTAAA
GTACGCACTGGCACTCAGAATGAAGCCGCATTGCTGGCTCTGATGGAAAAGACTGGCTACAACA
TGGTCCAAGAAAATGGGCAAAGGAAATTTGGTGGTCCTCCTCCAGGTTGGGAAGGTCCACCTCC
CCCTAGAGGTTGTGAAGTTTTTGTTGGAAAAATACCTCGTGATATGTATGAAGATGAATTGGTT
CCTGTATTTGAAAGAGCTGGGAAGATATATGAATTTCGACTGATGATGGAATTTAGTGGTGAAA
ATAGAGGTTATGCTTTCGTGATGTATACTACTAAAGAAGAAGCTCAATTAGCCATCCGGATTCT
TAACAATTATGAGATTCGACCTGGGAAGTTTATTGGTGTGTGTGTAAGCTTGGATAATTGCAGA
TTATTTATTGGAGCAATTCCCAAAGAAAAGAAAAAGGAAGAAATTTTGGATGAAATGAAGAAAG
TTACAGAAGGTGTTGTAGATGTGATTGTTTATCCAAGTGCAACTGACAAAACCAAGAACCGCGG
TTTTGCATTTGTTGAGTATGAGTCTCACAGAGCTGCTGCTATGGCCAGGAGAAAGCTGATTCCA
GGAACATTTCAACTCTGGGGCCACACCATTCAGGTAGATTGGGCTGATCCAGAGAAAGAAGTTG
ATGAGGAAACCATGCAGAGAGTTAAAGTTCTCTATGTAAGAAATCTAATGATCTCAACCACAGA
GGAAACAATTAAAGCAGAATTCAATAAGTTCAAGCCTGGTGCAGTGGAACGAGTAAAGAAACTT
AGAGATTATGCATTCGTTCACTTTTTCAACCGGGAAGATGCAGTGGCTGCTATGTCTGTTATGA
ATGGAAAATGCATTGATGGAGCCAGTATTGAGGTAACCCTGGCAAAGCCAGTAAATAAAGAAAA
TACTTGGCGACAGCATCTTAATGGCCAGATCAGCCCCAATTCAGAAAACCTACTTGTTTATGCT
AACAAGGAAGAGAGTCACTCCAAAAGTCTAGGCAAGCCACCAACTCTCCCCACGCGTCTCAATG
GTCAGCATAGTCCAAGCCCCCCTGAGATTGAAAGATGTACTTATCCTTTTTTTCCTGGAACAAA
GCTTACCCCAATTAGTATGTATTCTTTAAAATCCAATCATTTTAATTCTGCAGTGATGCATTTG
GATTATTACTGCAACAAAAATAATTGGGCACCACCAGAATATTATTTATATTCAACAACCAGTC
AGGATGGAAAAGTACTCTTGGTGTATAAAATAGTTATTCCTGCAATTGCAAATGGATCCCAGAG
TTACTTCATGCCAGATAAACTCTGCACAACGCTGGAGGATGCAAAGGAACTGGCAGCTCAGTTT
ACACTGCTTCATTTGGACAGGGAACACAGTCTCTTCAGCCTGGACCTGTGTAGAAGAATTTGGA
GGAAATAAGCAGGTCCTTTCTGATGTTGCTTGAGCTTATTCTCCTGCAGTTGGTCTCATTCCTG
TTCGTTAAACATTAAGTTTCTTCATGTGTTATAGACCTCATAGTGAATGATATTGGAGAGTGAA
AGCTTGACCTGTATATTAAATGATCTCATTCCATTTCTTTCATTCCAACAATAGCACAACTTTG
ATAAACGATCATTTTACAGACACAGTCACCACTTTGACTTATGCTGTAGTAAAGAGCATAGTTG
AGTTTTTGGAAAGTACAGGATCTACAAATTTGGTCAATAAAACACACACATACAAAATTACTAC
AATTAAGGAAGCAGGAAATTATTGGTACATGAGATGAACGTTTGTTTGAAATTAATATTTCAAA
TATAATTGTTTGAATAATTTGGTTAATTTTGGATAATTTTCTATACTATTAAGTTGATAATGGT
TTTGACGTTCTTTTGGTAGAGATGATTCATCTTAGTTTTGTGGTACCAGGGAGACTCTAATGTT
AAATTGATGTTTGGTTGTATGAATGTTTGTGCCAGCATTTAAATAATGAAATTTTGGACAGTTA
GTTCATACCAGAAGTCCAGGGACAAATGCTTATGCTGGTTTGATACCTAATATGGTTTTTTAAA
AAAGAAAAAAAAGAAAAGAAACTGAATTTGCTGTTCTTTTATCTTTTTCTTCATGATCTACCCT
TGGTGTCAGATCCAAATTTAAGAGAAGCTTTTTGTTGATTAAAGAGAAATCAGAGGTTCTCTTT
TTCTGTGTTAAAAAGAAAAAGATACCCAAAATGCACTGTAGTAAGACCTTTGAAACAGTGCTGT
CCATTAAGGAAAGAACCCTGACTTGATGGAACTGCTGGTGTTTGCCCTGCAGTGATAGTAATCC
ACCACCATTACAGTATCATCAGGTACTTAAATGTTAGAACATTATGTTAAAACGTGATTGTCAT
TTACATGTTTTGTCTTTTGAATTAAATTTGTGTCCACAAAGATGTGCAGCATAATTGTTCATAT
ATTTATTTACAGACTACAATTTCCGTCGCAGCTCAATAAATAGTCTTTCCCCTGTTAGCGCTAC
CCTCTCTACTGGGACACCCAGCGTGCTTCCTTATACTTCAAGGCCTTATTCTTATCCAAGCTAT
CCCTTGTCACCAACAATATCACTTGCTAATGGCAGCCATGTTGGACAACGACTATATATCTCCA
ATCAGGCCTCATTCTTCTGAAGAAAGTCTGGATATATTAGTATAAAATTTTCTTTGTATAAGGC
ATGAAAATTAAAATACTGTTGTATTTTAGAATTGGGTTTGCACATTTGACTTTAAAAACAAATA
TTTTAACATTAAACAGCTATAATTCAGAATGACAAGAGTGGTAGGATTTGCAGAAATGCAATTC
AAAGTTACTCAGTGATATCAAGCTACTACTTTTTTTTTTAAACTTTGGGGGTTTTTAATTCCCA
AGCTTGAAAGGATTCCAGTAGTTTATGTTTTTTTGTATAACAACTTTGTAAAACAGCATTTTAC
AAATATTGAAGTACTTAAAGACAGTGGTTGTACTAGATTAGATTACCAAGGATCGCTATTTATA
GTGGAGTTTGAAACAGTTATGTAACCAGAAGCATCTAACTATTATGTAGAAAGAAATGATGAGA
CAAAAAAGATTAAGATGCAAATTTTTGGCAGTAGTAATGAAAATCAGTCTACCATTGTGGTCCT
TGAAAGTAAGCAAATATTTTAGTTAATATTTGTTACAGAAATAAATTATAACTTTGCTGTTAAT
ATATTTAAGGTTTTTATAGTTATGCTTCATTTATGTTTTGATATTAATTACATTGTTTACATAA
GAAGTGTTAATGTTTTTTAAATGTTCAAATCATGTGTTAATTTTTATACTTCAAATTCTTCAAC
ATTAAATATATGGCACTACGAATGTGTGTTTTGTTTTTATTAAAATCTGTGCATATAAATGTCT
TTGATCTTTAAGAACATCTCTTTCTTTGCCAGGTCAATAACAGTTGCAGAGTCTTAGGTTTGAC
ATCTTCATGAGATCAAAGTGTCAGATAGAAAGAGAAAAAAGTTTTGTAAAAACAAATCAAATAC
CAGTAGAAAGTTTTGGTTGGTAGATTCAAAGAATCACCCTTTCTTACTAAAGAATAATTAATGA
ATTCAGGCCATTTTGACCTCTTCACTTTATTAGCATACATGGATAATTATAGTGATAATTTTTA
TAGTTGACATCAGATATTTTATATTTCAAAATATTACCTTTATTCAACTCATTCTATAAGCACT
AGAGGCAGGAGTGAATGCATAGAATTTAAAATAGTTAAAAATAATTTTTCTATCAGCTTAATTT
GAAGTTTCTAGTGGAAAGTTGTAAATGAATGTCAGCCTTTCCAATGCTAAAGAAGACAACCTTC
CTCACAAAGCATATGTGCTCCCTTTGCAGTGAACTGCTTCAGACTTTCTCACTTAAATGGGTAT
GGACATCACATCAGCACTGTTGATATTGTACAGCACAAATACCACAGAGATGATTGGCTCTAGG
TTGCAAATGATCCATTCAGAGAACATACAGTGAATGCTTTCATTTGCTTTGAGACCACCCATGG
AACACAGGGTAGTAGGCTCAGACTCTAAACCAGAAGAAGAGACACATTTGTTTTTCACAGAAAT
GTTTGTGATAGCTCAGATAAGTTATTACACACATTCTCACAGTTTTCACTTTGGGGTGAACCCA
ACAATTTAGAGAACTATCAACCACAAAATATTTGAATTCATGGTGATGTAATGGTAAATGCATA
AGTTTTGGTATCAGCCTTACAATATTAAAGCTAAAACATTGGCAAGTGTTAAGAAGTCATGGAG
TAGCTGACATTTAAGGGATATATTTTTATTAGTATAGCATTTTTTTGCACAACTTTTATCACTT
CCCCCTCAGTCACAATTACAGCCTTTATGTTAAAGGTTATTGCTTTGTGCAGTAGTGCGGATGA
GTGTAATCGTGTTCATATTACATGAGACTTTACTAGACTAGTGAATGTAATTGCATGCTGCCTT
AATTTCTGTAGAAGAGGGTAATTATATATGGTCCTTGTCCCAAATGAAGGCCTTCGTTAGTTAC
AAACTGTTGATAGATCTTAGATGGTACAGCTCTTGGGCTGAGAAACACTCCAGATGACAGCCTT
TATGAAATAGTGCATGCAGCTTGTTTAAAGTGCTGCTGAGGTTTGGGGGTGTTATTTAGAGCAG
AGGTGTAAATGAAAACCATAACCTTCAGTATTTGTTAGCGTGAATAAGGACATTAATAGCAATG
ATTCAAAGTTTAGAAACCAATATAAAAGGCTGATGAAGCCAATTTTAAAAGAGCACACTTGGCA
AGAAAGAGCTATAGCTTGTATCAAAATGCAAATATCGACTATAATATTGACATAGTGAATAAAA
AGCTAATTCCTAATTCAGATGTCCCCCAGGTATCTAAAACTCAACCTACCTGTAACCAAGGTAA
CTCTGTGTCTTATTTCATATTTTTATAGT

hide sequence

RefSeq Acc Id:

XM_017590872 ⟹ XP_017446361

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	2	170,496,383 - 170,540,044 (-)	NCBI
mRatBN7.2	2	168,198,324 - 168,241,996 (-)	NCBI
Rnor_6.0	2	181,828,931 - 181,874,190 (-)	NCBI

Sequence:

show sequence

ACTGGCCACGCCCTGCCCCGTCCGGCCCCGCGGCGACTCCTCTGGCCACCGCTTCCGCCCACAG
CGCTGATCCAAAGCTCTGGCGGCGGTTTGTGCTCGTTGGTCCAGGGATTTTAGGAATTGCAGCC
ATGAACGAAGAGAACACTGATGGAACAAATGGATGCAGTAAAGTACGCACTGGCACTCAGAATG
AAGCCGCATTGCTGGCTCTGATGGAAAAGACTGGCTACAACATGGTCCAAGAAAATGGGCAAAG
GAAATTTGGTGGTCCTCCTCCAGGTTGGGAAGGTCCACCTCCCCCTAGAGGTTGTGAAGTTTTT
GTTGGAAAAATACCTCGTGATATGTATGAAGATGAATTGGTTCCTGTATTTGAAAGAGCTGGGA
AGATATATGAATTTCGACTGATGATGGAATTTAGTGGTGAAAATAGAGGTTATGCTTTCGTGAT
GTATACTACTAAAGAAGAAGCTCAATTAGCCATCCGGATTCTTAACAATTATGAGATTCGACCT
GGGAAGTTTATTGGTGTGTGTGTAAGCTTGGATAATTGCAGATTATTTATTGGAGCAATTCCCA
AAGAAAAGAAAAAGGAAGAAATTTTGGATGAAATGAAGAAAGTTACAGAAGGTGTTGTAGATGT
GATTGTTTATCCAAGTGCAACTGACAAAACCAAGAACCGCGGTTTTGCATTTGTTGAGTATGAG
TCTCACAGAGCTGCTGCTATGGCCAGGAGAAAGCTGATTCCAGGAACATTTCAACTCTGGGGCC
ACACCATTCAGGTAGATTGGGCTGATCCAGAGAAAGAAGTTGATGAGGAAACCATGCAGAGAGT
TAAAGTTCTCTATGTAAGAAATCTAATGATCTCAACCACAGAGGAAACAATTAAAGCAGAATTC
AATAAGTTCAAGCCTGGTGCAGTGGAACGAGTAAAGAAACTTAGAGATTATGCATTCGTTCACT
TTTTCAACCGGGAAGATGCAGTGGCTGCTATGTCTGTTATGAATGGAAAATGCATTGATGGAGC
CAGTATTGAGGTAACCCTGGCAAAGCCAGTAAATAAAGAAAATACTTGGCGACAGCATCTTAAT
GGCCAGATCAGCCCCAATTCAGAAAACCTACTTGTTTATGCTAACAAGGAAGAGAGTCACTCCA
AAAGTCTAGGCAAGCCACCAACTCTCCCCACGCGTCTCAATGGTCAGCATAGTCCAAGCCCCCC
TGAGATTGAAAGATGTACTTATCCTTTTTTTCCTGGAACAAAGCTTACCCCAATTAGTATGTAT
TCTTTAAAATCCAATCATTTTAATTCTGCAGTGATGCATTTGGATTATTACTGCAACAAAAATA
ATTGGGCACCACCAGAATATTATTTATATTCAACAACCAGTCAGGATGGAAAAGTACTCTTGGT
GTATAAAATAGTTATTCCTGCAATTGCAAATGGATCCCAGAGTTACTTCATGCCAGATAAACTC
TGCACAACGCTGGAGGATGCAAAGGAACTGGCAGCTCAGTTTACACTGCTTCATTTGGACTACA
ATTTCCGTCGCAGCTCAATAAATAGTCTTTCCCCTGTTAGCGCTACCCTCTCTACTGGGACACC
CAGCGTGCTTCCTTATACTTCAAGGCCTTATTCTTATCCAAGCTATCCCTTGTCACCAACAATA
TCACTTGCTAATGGCAGCCATGTTGGACAACGACTATATATCTCCAATCAGGCCTCATTCTTCT
GAAGAAAGTCTGGATATATTAGTATAAAATTTTCTTTGTATAAGGCATGAAAATTAAAATACTG
TTGTATTTTAGAATTGGGTTTGCACATTTGACTTTAAAAACAAATATTTTAACATTAAACAGCT
ATAATTCAGAATGACAAGAGTGGTAGGATTTGCAGAAATGCAATTCAAAGTTACTCAGTGATAT
CAAGCTACTACTTTTTTTTTTAAACTTTGGGGGTTTTTAATTCCCAAGCTTGAAAGGATTCCAG
TAGTTTATGTTTTTTTGTATAACAACTTTGTAAAACAGCATTTTACAAATATTGAAGTACTTAA
AGACAGTGGTTGTACTAGATTAGATTACCAAGGATCGCTATTTATAGTGGAGTTTGAAACAGTT
ATGTAACCAGAAGCATCTAACTATTATGTAGAAAGAAATGATGAGACAAAAAAGATTAAGATGC
AAATTTTTGGCAGTAGTAATGAAAATCAGTCTACCATTGTGGTCCTTGAAAGTAAGCAAATATT
TTAGTTAATATTTGTTACAGAAATAAATTATAACTTTGCTGTTAATATATTTAAGGTTTTTATA
GTTATGCTTCATTTATGTTTTGATATTAATTACATTGTTTACATAAGAAGTGTTAATGTTTTTT
AAATGTTCAAATCATGTGTTAATTTTTATACTTCAAATTCTTCAACATTAAATATATGGCACTA
CGAATGTGTGTTTTGTTTTTATTAAAATCTGTGCATATAAATGTCTTTGATCTTTAAGAACATC
TCTTTCTTTGCCAGGTCAATAACAGTTGCAGAGTCTTAGGTTTGACATCTTCATGAGATCAAAG
TGTCAGATAGAAAGAGAAAAAAGTTTTGTAAAAACAAATCAAATACCAGTAGAAAGTTTTGGTT
GGTAGATTCAAAGAATCACCCTTTCTTACTAAAGAATAATTAATGAATTCAGGCCATTTTGACC
TCTTCACTTTATTAGCATACATGGATAATTATAGTGATAATTTTTATAGTTGACATCAGATATT
TTATATTTCAAAATATTACCTTTATTCAACTCATTCTATAAGCACTAGAGGCAGGAGTGAATGC
ATAGAATTTAAAATAGTTAAAAATAATTTTTCTATCAGCTTAATTTGAAGTTTCTAGTGGAAAG
TTGTAAATGAATGTCAGCCTTTCCAATGCTAAAGAAGACAACCTTCCTCACAAAGCATATGTGC
TCCCTTTGCAGTGAACTGCTTCAGACTTTCTCACTTAAATGGGTATGGACATCACATCAGCACT
GTTGATATTGTACAGCACAAATACCACAGAGATGATTGGCTCTAGGTTGCAAATGATCCATTCA
GAGAACATACAGTGAATGCTTTCATTTGCTTTGAGACCACCCATGGAACACAGGGTAGTAGGCT
CAGACTCTAAACCAGAAGAAGAGACACATTTGTTTTTCACAGAAATGTTTGTGATAGCTCAGAT
AAGTTATTACACACATTCTCACAGTTTTCACTTTGGGGTGAACCCAACAATTTAGAGAACTATC
AACCACAAAATATTTGAATTCATGGTGATGTAATGGTAAATGCATAAGTTTTGGTATCAGCCTT
ACAATATTAAAGCTAAAACATTGGCAAGTGTTAAGAAGTCATGGAGTAGCTGACATTTAAGGGA
TATATTTTTATTAGTATAGCATTTTTTTGCACAACTTTTATCACTTCCCCCTCAGTCACAATTA
CAGCCTTTATGTTAAAGGTTATTGCTTTGTGCAGTAGTGCGGATGAGTGTAATCGTGTTCATAT
TACATGAGACTTTACTAGACTAGTGAATGTAATTGCATGCTGCCTTAATTTCTGTAGAAGAGGG
TAATTATATATGGTCCTTGTCCCAAATGAAGGCCTTCGTTAGTTACAAACTGTTGATAGATCTT
AGATGGTACAGCTCTTGGGCTGAGAAACACTCCAGATGACAGCCTTTATGAAATAGTGCATGCA
GCTTGTTTAAAGTGCTGCTGAGGTTTGGGGGTGTTATTTAGAGCAGAGGTGTAAATGAAAACCA
TAACCTTCAGTATTTGTTAGCGTGAATAAGGACATTAATAGCAATGATTCAAAGTTTAGAAACC
AATATAAAAGGCTGATGAAGCCAATTTTAAAAGAGCACACTTGGCAAGAAAGAGCTATAGCTTG
TATCAAAATGCAAATATCGACTATAATATTGACATAGTGAATAAAAAGCTAATTCCTAATTCAG
ATGTCCCCCAGGTATCTAAAACTCAACCTACCTGTAACCAAGGTAACTCTGTGTCTTATTTCAT
ATTTTTATAGT

hide sequence

RefSeq Acc Id:

XM_017590873 ⟹ XP_017446362

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	2	170,496,383 - 170,539,685 (-)	NCBI
mRatBN7.2	2	168,198,324 - 168,241,771 (-)	NCBI
Rnor_6.0	2	181,828,931 - 181,874,033 (-)	NCBI

Sequence:

show sequence

GAGCTGTGGGGGTGACCGGCAAACCGCTGGTAACGGCCGCAGTCGGGGGTGCCCTCGCGCTAAT
CCGGGGCGCCACCGTCGGGCGGCGGCCGCGGGCTGGCCTGCGCGGCCGCCCCGTCGACTGCGGC
TCCGGGTAGCCTCGGGCTCCCTGCGCGGCCGCCCGGTCCATAGAAATTACTCCAGGGCCCTCGG
GCTCCTGGCTGCCGCTTCTGACCTCGCTGGCCTCCCGCCGCCGTTGCGTCCGCTCGCTGCGCCA
CGGAGTCCCTAGCCGGCCGGGCCTCGAACTTTCCGCTGCCCCGACAGGGAACCGGCCGAGCTGC
CAGGGCACCTGCGAATTGCAGCCATGAACGAAGAGAACACTGATGGAACAAATGGATGCAGTAA
AGTACGCACTGGCACTCAGAATGAAGCCGCATTGCTGGCTCTGATGGAAAAGACTGGCTACAAC
ATGGTCCAAGAAAATGGGCAAAGGAAATTTGGTGGTCCTCCTCCAGGTTGGGAAGGTCCACCTC
CCCCTAGAGGTTGTGAAGTTTTTGTTGGAAAAATACCTCGTGATATGTATGAAGATGAATTGGT
TCCTGTATTTGAAAGAGCTGGGAAGATATATGAATTTCGACTGATGATGGAATTTAGTGGTGAA
AATAGAGGTTATGCTTTCGTGATGTATACTACTAAAGAAGAAGCTCAATTAGCCATCCGGATTC
TTAACAATTATGAGATTCGACCTGGGAAGTTTATTGGTGTGTGTGTAAGCTTGGATAATTGCAG
ATTATTTATTGGAGCAATTCCCAAAGAAAAGAAAAAGGAAGAAATTTTGGATGAAATGAAGAAA
GTTACAGAAGGTGTTGTAGATGTGATTGTTTATCCAAGTGCAACTGACAAAACCAAGAACCGCG
GTTTTGCATTTGTTGAGTATGAGTCTCACAGAGCTGCTGCTATGGCCAGGAGAAAGCTGATTCC
AGGAACATTTCAACTCTGGGGCCACACCATTCAGGTAGATTGGGCTGATCCAGAGAAAGAAGTT
GATGAGGAAACCATGCAGAGAGTTAAAGTTCTCTATGTAAGAAATCTAATGATCTCAACCACAG
AGGAAACAATTAAAGCAGAATTCAATAAGTTCAAGCCTGGTGCAGTGGAACGAGTAAAGAAACT
TAGAGATTATGCATTCGTTCACTTTTTCAACCGGGAAGATGCAGTGGCTGCTATGTCTGTTATG
AATGGAAAATGCATTGATGGAGCCAGTATTGAGGTAACCCTGGCAAAGCCAGTAAATAAAGAAA
ATACTTGGCGACAGCATCTTAATGGCCAGATCAGCCCCAATTCAGAAAACCTACTTGTTTATGC
TAACAAGGAAGAGAGTCACTCCAAAAGTCTAGGCAAGCCACCAACTCTCCCCACGCGTCTCAAT
GGTCAGCATAGTCCAAGCCCCCCTGAGATTGAAAGATGTACTTATCCTTTTTTTCCTGGAACAA
AGCTTACCCCAATTAGTATGTATTCTTTAAAATCCAATCATTTTAATTCTGCAGTGATGCATTT
GGATTATTACTGCAACAAAAATAATTGGGCACCACCAGAATATTATTTATATTCAACAACCAGT
CAGGATGGAAAAGTACTCTTGGTGTATAAAATAGTTATTCCTGCAATTGCAAATGGATCCCAGA
GTTACTTCATGCCAGATAAACTCTGCACAACGCTGGAGGATGCAAAGGAACTGGCAGCTCAGTT
TACACTGCTTCATTTGGACTACAATTTCCGTCGCAGCTCAATAAATAGTCTTTCCCCTGTTAGC
GCTACCCTCTCTACTGGGACACCCAGCGTGCTTCCTTATACTTCAAGGCCTTATTCTTATCCAA
GCTATCCCTTGTCACCAACAATATCACTTGCTAATGGCAGCCATGTTGGACAACGACTATATAT
CTCCAATCAGGCCTCATTCTTCTGAAGAAAGTCTGGATATATTAGTATAAAATTTTCTTTGTAT
AAGGCATGAAAATTAAAATACTGTTGTATTTTAGAATTGGGTTTGCACATTTGACTTTAAAAAC
AAATATTTTAACATTAAACAGCTATAATTCAGAATGACAAGAGTGGTAGGATTTGCAGAAATGC
AATTCAAAGTTACTCAGTGATATCAAGCTACTACTTTTTTTTTTAAACTTTGGGGGTTTTTAAT
TCCCAAGCTTGAAAGGATTCCAGTAGTTTATGTTTTTTTGTATAACAACTTTGTAAAACAGCAT
TTTACAAATATTGAAGTACTTAAAGACAGTGGTTGTACTAGATTAGATTACCAAGGATCGCTAT
TTATAGTGGAGTTTGAAACAGTTATGTAACCAGAAGCATCTAACTATTATGTAGAAAGAAATGA
TGAGACAAAAAAGATTAAGATGCAAATTTTTGGCAGTAGTAATGAAAATCAGTCTACCATTGTG
GTCCTTGAAAGTAAGCAAATATTTTAGTTAATATTTGTTACAGAAATAAATTATAACTTTGCTG
TTAATATATTTAAGGTTTTTATAGTTATGCTTCATTTATGTTTTGATATTAATTACATTGTTTA
CATAAGAAGTGTTAATGTTTTTTAAATGTTCAAATCATGTGTTAATTTTTATACTTCAAATTCT
TCAACATTAAATATATGGCACTACGAATGTGTGTTTTGTTTTTATTAAAATCTGTGCATATAAA
TGTCTTTGATCTTTAAGAACATCTCTTTCTTTGCCAGGTCAATAACAGTTGCAGAGTCTTAGGT
TTGACATCTTCATGAGATCAAAGTGTCAGATAGAAAGAGAAAAAAGTTTTGTAAAAACAAATCA
AATACCAGTAGAAAGTTTTGGTTGGTAGATTCAAAGAATCACCCTTTCTTACTAAAGAATAATT
AATGAATTCAGGCCATTTTGACCTCTTCACTTTATTAGCATACATGGATAATTATAGTGATAAT
TTTTATAGTTGACATCAGATATTTTATATTTCAAAATATTACCTTTATTCAACTCATTCTATAA
GCACTAGAGGCAGGAGTGAATGCATAGAATTTAAAATAGTTAAAAATAATTTTTCTATCAGCTT
AATTTGAAGTTTCTAGTGGAAAGTTGTAAATGAATGTCAGCCTTTCCAATGCTAAAGAAGACAA
CCTTCCTCACAAAGCATATGTGCTCCCTTTGCAGTGAACTGCTTCAGACTTTCTCACTTAAATG
GGTATGGACATCACATCAGCACTGTTGATATTGTACAGCACAAATACCACAGAGATGATTGGCT
CTAGGTTGCAAATGATCCATTCAGAGAACATACAGTGAATGCTTTCATTTGCTTTGAGACCACC
CATGGAACACAGGGTAGTAGGCTCAGACTCTAAACCAGAAGAAGAGACACATTTGTTTTTCACA
GAAATGTTTGTGATAGCTCAGATAAGTTATTACACACATTCTCACAGTTTTCACTTTGGGGTGA
ACCCAACAATTTAGAGAACTATCAACCACAAAATATTTGAATTCATGGTGATGTAATGGTAAAT
GCATAAGTTTTGGTATCAGCCTTACAATATTAAAGCTAAAACATTGGCAAGTGTTAAGAAGTCA
TGGAGTAGCTGACATTTAAGGGATATATTTTTATTAGTATAGCATTTTTTTGCACAACTTTTAT
CACTTCCCCCTCAGTCACAATTACAGCCTTTATGTTAAAGGTTATTGCTTTGTGCAGTAGTGCG
GATGAGTGTAATCGTGTTCATATTACATGAGACTTTACTAGACTAGTGAATGTAATTGCATGCT
GCCTTAATTTCTGTAGAAGAGGGTAATTATATATGGTCCTTGTCCCAAATGAAGGCCTTCGTTA
GTTACAAACTGTTGATAGATCTTAGATGGTACAGCTCTTGGGCTGAGAAACACTCCAGATGACA
GCCTTTATGAAATAGTGCATGCAGCTTGTTTAAAGTGCTGCTGAGGTTTGGGGGTGTTATTTAG
AGCAGAGGTGTAAATGAAAACCATAACCTTCAGTATTTGTTAGCGTGAATAAGGACATTAATAG
CAATGATTCAAAGTTTAGAAACCAATATAAAAGGCTGATGAAGCCAATTTTAAAAGAGCACACT
TGGCAAGAAAGAGCTATAGCTTGTATCAAAATGCAAATATCGACTATAATATTGACATAGTGAA
TAAAAAGCTAATTCCTAATTCAGATGTCCCCCAGGTATCTAAAACTCAACCTACCTGTAACCAA
GGTAACTCTGTGTCTTATTTCATATTTTTATAGT

hide sequence

RefSeq Acc Id:

XM_039102296 ⟹ XP_038958224

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	2	170,497,159 - 170,540,032 (-)	NCBI
mRatBN7.2	2	168,199,100 - 168,241,992 (-)	NCBI

RefSeq Acc Id:

XM_039102297 ⟹ XP_038958225

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	2	170,496,383 - 170,540,032 (-)	NCBI
mRatBN7.2	2	168,198,324 - 168,241,993 (-)	NCBI

RefSeq Acc Id:

XM_063281816 ⟹ XP_063137886

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	2	170,496,383 - 170,548,101 (-)	NCBI

RefSeq Acc Id:

XM_063281817 ⟹ XP_063137887

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	2	170,496,383 - 170,539,685 (-)	NCBI

RefSeq Acc Id:

XM_063281818 ⟹ XP_063137888

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	2	170,527,488 - 170,540,032 (-)	NCBI

Protein Sequences


Protein RefSeqs	NP_001129189	(Get FASTA)	NCBI Sequence Viewer
	XP_006232592	(Get FASTA)	NCBI Sequence Viewer
	XP_017446361	(Get FASTA)	NCBI Sequence Viewer
	XP_017446362	(Get FASTA)	NCBI Sequence Viewer
	XP_038958224	(Get FASTA)	NCBI Sequence Viewer
	XP_038958225	(Get FASTA)	NCBI Sequence Viewer
	XP_063137886	(Get FASTA)	NCBI Sequence Viewer
	XP_063137887	(Get FASTA)	NCBI Sequence Viewer
	XP_063137888	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	EDM00846	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSRNOP00000031755
	ENSRNOP00000031755.4
	ENSRNOP00000081781.1
	ENSRNOP00000089919
	ENSRNOP00000089919.1
	ENSRNOP00000094048
	ENSRNOP00000094048.1

RefSeq Acc Id:

NP_001129189 ⟸ NM_001135717

- UniProtKB:

A0A8I6ACM5 (UniProtKB/TrEMBL), A6J5U3 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MNEENTDGTNGCSKVRTGTQNEAALLALMEKTGYNMVQENGQRKFGGPPPGWEGPPPPRGCEVF
VGKIPRDMYEDELVPVFERAGKIYEFRLMMEFSGENRGYAFVMYTTKEEAQLAIRILNNYEIRP
GKFIGVCVSLDNCRLFIGAIPKEKKKEEILDEMKKVTEGVVDVIVYPSATDKTKNRGFAFVEYE
SHRAAAMARRKLIPGTFQLWGHTIQVDWADPEKEVDEETMQRVKVLYVRNLMISTTEETIKAEF
NKFKPGAVERVKKLRDYAFVHFFNREDAVAAMSVMNGKCIDGASIEVTLAKPVNKENTWRQHLN
GQISPNSENLLVYANKEESHSKSLGKPPTLPTRLNGQHSPSPPEIERCTYPFFPGTKLTPISMY
SLKSNHFNSAVMHLDYYCNKNNWAPPEYYLYSTTSQDGKVLLVYKIVIPAIANGSQSYFMPDKL
CTTLEDAKELAAQFTLLHLDYNFRRSSINSLSPVSATLSTGTPSVLPYTSRPYSYPSYPLSPTI
SLANGSHVGQRLYISNQASFF

hide sequence

RefSeq Acc Id:	XP_006232592 ⟸ XM_006232530
- Peptide Label:	isoform X2
- UniProtKB:	A0A8I6ALR2 (UniProtKB/TrEMBL), A6J5U3 (UniProtKB/TrEMBL)
- Sequence:	show sequence MNEENTDGTNGCSKVRTGTQNEAALLALMEKTGYNMVQENGQRKFGGPPPGWEGPPPPRGCEVF VGKIPRDMYEDELVPVFERAGKIYEFRLMMEFSGENRGYAFVMYTTKEEAQLAIRILNNYEIRP GKFIGVCVSLDNCRLFIGAIPKEKKKEEILDEMKKVTEGVVDVIVYPSATDKTKNRGFAFVEYE SHRAAAMARRKLIPGTFQLWGHTIQVDWADPEKEVDEETMQRVKVLYVRNLMISTTEETIKAEF NKFKPGAVERVKKLRDYAFVHFFNREDAVAAMSVMNGKCIDGASIEVTLAKPVNKENTWRQHLN GQISPNSENLLVYANKEESHSKSLGKPPTLPTRLNGQHSPSPPEIERCTYPFFPGTKLTPISMY SLKSNHFNSAVMHLDYYCNKNNWAPPEYYLYSTTSQDGKVLLVYKIVIPAIANGSQSYFMPDKL CTTLEDAKELAAQFTLLHLDREHSLFSLDLCRRIWRK hide sequence

RefSeq Acc Id:	XP_017446361 ⟸ XM_017590872
- Peptide Label:	isoform X1
- UniProtKB:	A0A8I6ACM5 (UniProtKB/TrEMBL), A6J5U3 (UniProtKB/TrEMBL)
- Sequence:	show sequence MNEENTDGTNGCSKVRTGTQNEAALLALMEKTGYNMVQENGQRKFGGPPPGWEGPPPPRGCEVF VGKIPRDMYEDELVPVFERAGKIYEFRLMMEFSGENRGYAFVMYTTKEEAQLAIRILNNYEIRP GKFIGVCVSLDNCRLFIGAIPKEKKKEEILDEMKKVTEGVVDVIVYPSATDKTKNRGFAFVEYE SHRAAAMARRKLIPGTFQLWGHTIQVDWADPEKEVDEETMQRVKVLYVRNLMISTTEETIKAEF NKFKPGAVERVKKLRDYAFVHFFNREDAVAAMSVMNGKCIDGASIEVTLAKPVNKENTWRQHLN GQISPNSENLLVYANKEESHSKSLGKPPTLPTRLNGQHSPSPPEIERCTYPFFPGTKLTPISMY SLKSNHFNSAVMHLDYYCNKNNWAPPEYYLYSTTSQDGKVLLVYKIVIPAIANGSQSYFMPDKL CTTLEDAKELAAQFTLLHLDYNFRRSSINSLSPVSATLSTGTPSVLPYTSRPYSYPSYPLSPTI SLANGSHVGQRLYISNQASFF hide sequence

RefSeq Acc Id:	XP_017446362 ⟸ XM_017590873
- Peptide Label:	isoform X1
- UniProtKB:	A0A8I6ACM5 (UniProtKB/TrEMBL), A6J5U3 (UniProtKB/TrEMBL)
- Sequence:	show sequence MNEENTDGTNGCSKVRTGTQNEAALLALMEKTGYNMVQENGQRKFGGPPPGWEGPPPPRGCEVF VGKIPRDMYEDELVPVFERAGKIYEFRLMMEFSGENRGYAFVMYTTKEEAQLAIRILNNYEIRP GKFIGVCVSLDNCRLFIGAIPKEKKKEEILDEMKKVTEGVVDVIVYPSATDKTKNRGFAFVEYE SHRAAAMARRKLIPGTFQLWGHTIQVDWADPEKEVDEETMQRVKVLYVRNLMISTTEETIKAEF NKFKPGAVERVKKLRDYAFVHFFNREDAVAAMSVMNGKCIDGASIEVTLAKPVNKENTWRQHLN GQISPNSENLLVYANKEESHSKSLGKPPTLPTRLNGQHSPSPPEIERCTYPFFPGTKLTPISMY SLKSNHFNSAVMHLDYYCNKNNWAPPEYYLYSTTSQDGKVLLVYKIVIPAIANGSQSYFMPDKL CTTLEDAKELAAQFTLLHLDYNFRRSSINSLSPVSATLSTGTPSVLPYTSRPYSYPSYPLSPTI SLANGSHVGQRLYISNQASFF hide sequence

Ensembl Acc Id:

ENSRNOP00000031755 ⟸ ENSRNOT00000035846

RefSeq Acc Id:	XP_038958225 ⟸ XM_039102297
- Peptide Label:	isoform X3
- UniProtKB:	D3ZAE2 (UniProtKB/TrEMBL), A6J5U3 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038958224 ⟸ XM_039102296
- Peptide Label:	isoform X2
- UniProtKB:	A0A8I6ALR2 (UniProtKB/TrEMBL), A6J5U3 (UniProtKB/TrEMBL)

Ensembl Acc Id:

ENSRNOP00000089919 ⟸ ENSRNOT00000116504

Ensembl Acc Id:

ENSRNOP00000094048 ⟸ ENSRNOT00000098771

Ensembl Acc Id:

ENSRNOP00000081781 ⟸ ENSRNOT00000097000

RefSeq Acc Id:	XP_063137886 ⟸ XM_063281816
- Peptide Label:	isoform X1
- UniProtKB:	A6J5U3 (UniProtKB/TrEMBL), A0A8I6ACM5 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063137887 ⟸ XM_063281817
- Peptide Label:	isoform X3
- UniProtKB:	A6J5U3 (UniProtKB/TrEMBL), D3ZAE2 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063137888 ⟸ XM_063281818
- Peptide Label:	isoform X4

Protein Domains

RRM

Protein Structures

Name	Modeler	Protein Id	AA Range	Protein Structure
AF-D3ZAE2-F1-model_v2	AlphaFold	D3ZAE2	1-533	view protein structure

Transcriptome

eQTL		View at Phenogen
WGCNA		View at Phenogen
Tissue/Strain Expression		View at Phenogen

Additional Information

External Database Links

Database	Acc Id	Source(s)
AGR Gene	RGD:1560205	AgrOrtholog
BioCyc Gene	G2FUF-52673	BioCyc
Ensembl Genes	ENSRNOG00000025823	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSRNOT00000035846	ENTREZGENE
	ENSRNOT00000035846.4	UniProtKB/TrEMBL
	ENSRNOT00000097000.1	UniProtKB/TrEMBL
	ENSRNOT00000098771	ENTREZGENE
	ENSRNOT00000098771.1	UniProtKB/TrEMBL
	ENSRNOT00000116504	ENTREZGENE
	ENSRNOT00000116504.1	UniProtKB/TrEMBL
Gene3D-CATH	3.30.70.330	UniProtKB/TrEMBL
InterPro	HnRNP_R/Q_splicing_fac	UniProtKB/TrEMBL
	Nucleotide-bd_a/b_plait_sf	UniProtKB/TrEMBL
	RBD_domain_sf	UniProtKB/TrEMBL
	RBM46_DSRM	UniProtKB/TrEMBL
	RBM46_RRM1	UniProtKB/TrEMBL
	RBM46_RRM2	UniProtKB/TrEMBL
	RBM46_RRM3	UniProtKB/TrEMBL
	RRM_RNP1	UniProtKB/TrEMBL
KEGG Report	rno:310548	UniProtKB/TrEMBL
NCBI Gene	310548	ENTREZGENE
PANTHER	HETEROGENEOUS NUCLEAR RIBONUCLEOPROTEIN	UniProtKB/TrEMBL
Pfam	DND1_DSRM	UniProtKB/TrEMBL
	RRM_1	UniProtKB/TrEMBL
PhenoGen	Rbm46	PhenoGen
PROSITE	RRM	UniProtKB/TrEMBL
RatGTEx	ENSRNOG00000025823	RatGTEx
SMART	RRM	UniProtKB/TrEMBL
Superfamily-SCOP	SSF54928	UniProtKB/TrEMBL
UniProt	A0A8I6ACM5	ENTREZGENE, UniProtKB/TrEMBL
	A0A8I6ALR2	ENTREZGENE, UniProtKB/TrEMBL
	A0A8I6G6G8_RAT	UniProtKB/TrEMBL
	A6J5U3	ENTREZGENE, UniProtKB/TrEMBL
	D3ZAE2	ENTREZGENE, UniProtKB/TrEMBL

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2008-12-01	Rbm46	RNA binding motif protein 46	RGD1560205	similar to hypothetical protein MGC27016	Nomenclature updated to reflect human and mouse nomenclature	1299863	APPROVED
2008-04-30	RGD1560205	similar to hypothetical protein MGC27016	RGD1560205_predicted	similar to hypothetical protein MGC27016 (predicted)	'predicted' is removed	2292626	APPROVED
2006-03-07	RGD1560205_predicted	similar to hypothetical protein MGC27016 (predicted)	LOC310548	similar to hypothetical protein MGC27016	Symbol and Name status set to approved	1299863	APPROVED
2006-02-09	LOC310548	similar to hypothetical protein MGC27016			Symbol and Name status set to provisional	70820	PROVISIONAL

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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