Ankrd28 (ankyrin repeat domain 28) - Rat Genome Database

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Gene: Ankrd28 (ankyrin repeat domain 28) Rattus norvegicus
Analyze
Symbol: Ankrd28
Name: ankyrin repeat domain 28
RGD ID: 1559931
Description: Orthologous to human ANKRD28 (ankyrin repeat domain 28); INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine; bisphenol A; cadmium dichloride.
Type: protein-coding
RefSeq Status: MODEL
Previously known as: LOC102549679; LOC306264; RGD1559931; serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit A; serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit A-like; similar to Ankyrin repeat domain protein 28
RGD Orthologs
Human
Mouse
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: mRatBN7.2 - mRatBN7.2 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mRatBN7.2166,918,487 - 7,050,244 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl166,914,336 - 7,050,249 (-)EnsemblmRatBN7.2 Ensembl
Rnor_6.0167,816,876 - 7,879,023 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl167,818,667 - 7,928,518 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0167,737,522 - 7,800,288 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4167,166,559 - 7,248,739 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
Celera168,148,113 - 8,278,476 (+)NCBICelera
Cytogenetic Map16p16NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Molecular Function

References

References - curated
# Reference Title Reference Citation
1. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions

Genomics

Comparative Map Data
Ankrd28
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mRatBN7.2166,918,487 - 7,050,244 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl166,914,336 - 7,050,249 (-)EnsemblmRatBN7.2 Ensembl
Rnor_6.0167,816,876 - 7,879,023 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl167,818,667 - 7,928,518 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0167,737,522 - 7,800,288 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4167,166,559 - 7,248,739 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
Celera168,148,113 - 8,278,476 (+)NCBICelera
Cytogenetic Map16p16NCBI
ANKRD28
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38315,667,236 - 15,859,814 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p13 Ensembl315,667,236 - 15,859,771 (-)EnsemblGRCh38hg38GRCh38
GRCh37315,708,743 - 15,901,321 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 36315,683,747 - 15,876,057 (-)NCBINCBI36Build 36hg18NCBI36
Build 34315,700,252 - 15,813,337NCBI
Celera315,646,877 - 15,840,010 (-)NCBICelera
Cytogenetic Map3p25.1NCBI
HuRef315,643,973 - 15,836,592 (-)NCBIHuRef
CHM1_1315,659,447 - 15,852,157 (-)NCBICHM1_1
T2T-CHM13v2.0315,669,546 - 15,862,982 (-)NCBIT2T-CHM13v2.0
Ankrd28
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391431,418,687 - 31,552,372 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1431,420,725 - 31,552,608 (-)EnsemblGRCm39 Ensembl
GRCm381431,698,768 - 31,830,567 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1431,698,768 - 31,830,651 (-)EnsemblGRCm38mm10GRCm38
MGSCv371432,513,201 - 32,643,601 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361430,529,024 - 30,659,424 (-)NCBIMGSCv36mm8
Celera1427,958,335 - 28,088,802 (-)NCBICelera
Cytogenetic Map14BNCBI
Ankrd28
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554308,014,583 - 8,197,434 (-)EnsemblChiLan1.0
ChiLan1.0NW_0049554308,014,631 - 8,197,434 (-)NCBIChiLan1.0ChiLan1.0
ANKRD28
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
PanPan1.1315,928,978 - 16,122,608 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl315,932,020 - 16,057,647 (-)Ensemblpanpan1.1panPan2
Mhudiblu_PPA_v0315,591,890 - 15,785,997 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
ANKRD28
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.12326,824,219 - 27,012,601 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl2326,823,479 - 27,010,908 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha2326,799,385 - 26,988,667 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.02327,326,011 - 27,516,914 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl2327,326,086 - 27,515,793 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.12327,108,061 - 27,216,255 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.02327,088,868 - 27,278,144 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.02327,337,409 - 27,526,786 (+)NCBIUU_Cfam_GSD_1.0
Ankrd28
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024405118175,412,381 - 175,592,059 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049364738,550,950 - 8,730,902 (-)EnsemblSpeTri2.0
SpeTri2.0NW_0049364738,550,851 - 8,730,845 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
ANKRD28
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl132,922,853 - 3,135,709 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1132,922,855 - 3,135,743 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2133,071,720 - 3,208,254 (-)NCBISscrofa10.2Sscrofa10.2susScr3
ANKRD28
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11560,492,121 - 60,681,487 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl1560,491,029 - 60,617,911 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366604133,532,424 - 33,721,901 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Ankrd28
(Heterocephalus glaber - naked mole-rat)
Naked Mole-rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_004624821965,854 - 1,155,128 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_004624821964,162 - 1,155,437 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in Ankrd28
468 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:27
Count of miRNA genes:26
Interacting mature miRNAs:27
Transcripts:ENSRNOT00000026680
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (mRatBN7.2)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1357403Slep4Serum leptin concentration QTL 43.91blood leptin amount (VT:0005667)serum leptin level (CMO:0000780)1619639137Rat
1600369Hcas8Hepatocarcinoma susceptibility QTL 8liver integrity trait (VT:0010547)liver tumorous lesion number (CMO:0001068)16122477621Rat
631830Alc7Alcohol consumption QTL 72.9consumption behavior trait (VT:0002069)ethanol drink intake rate (CMO:0001407)16126727669Rat
634355Rends4Renal damage susceptibility QTL 40.05kidney blood vessel morphology trait (VT:0000530)organ lesion measurement (CMO:0000677)16126727669Rat
1582235Insul8Insulin level QTL 83.30.0063blood insulin amount (VT:0001560)calculated serum insulin level (CMO:0000359)16126727669Rat
9590151Scort8Serum corticosterone level QTL 88.450.001blood corticosterone amount (VT:0005345)plasma corticosterone level (CMO:0001173)16130836262Rat
2302380Slep6Serum leptin concentration QTL 63.36blood leptin amount (VT:0005667)serum leptin level (CMO:0000780)16132139025Rat
2307172Activ4Activity QTL 43.710.00023locomotor behavior trait (VT:0001392)number of entries into a discrete space in an experimental apparatus (CMO:0000960)16133418960Rat
1354584Despr6Despair related QTL 63.10.0067locomotor behavior trait (VT:0001392)amount of time spent in voluntary immobility (CMO:0001043)16139533930Rat
2303566Bw90Body weight QTL 902body mass (VT:0001259)body weight (CMO:0000012)16139533930Rat
631561Hcuc2Hepatic copper content QTL 22.8liver copper amount (VT:0003065)liver total copper weight (CMO:0001507)16139533949Rat
6903319Bw114Body weight QTL 1142.70.0037body mass (VT:0001259)body weight (CMO:0000012)16143534949Rat
7411664Foco30Food consumption QTL 30110.001eating behavior trait (VT:0001431)feed conversion ratio (CMO:0001312)16144588133Rat
1354625Despr7Despair related QTL 73.160.016locomotor behavior trait (VT:0001392)amount of time spent in voluntary immobility (CMO:0001043)16144977551Rat
1600378Arunc4Aerobic running capacity QTL 40.03exercise endurance trait (VT:0002332)maximum distance run on treadmill (CMO:0001406)1638024580345693Rat
2293343Glom16Glomerulus QTL 167.4kidney glomerulus integrity trait (VT:0010546)kidney sclerotic glomeruli count to total glomeruli count ratio (CMO:0001269)1683223646053497Rat
2312660Bw95Body weight QTL 950.05inguinal fat pad mass (VT:0010424)inguinal fat pad weight to body weight ratio (CMO:0001253)1683223659492508Rat
2312663Slep9Serum leptin concentration QTL 90.001blood leptin amount (VT:0005667)serum leptin level (CMO:0000780)1683223659492508Rat
2312666Insul16Insulin level QTL 160.01blood insulin amount (VT:0001560)serum insulin level (CMO:0000358)1683223659492508Rat
2312669Stl23Serum triglyceride level QTL 230.01blood triglyceride amount (VT:0002644)serum triglyceride level (CMO:0000360)1683223659492508Rat
2301406Kidm39Kidney mass QTL 390.002kidney mass (VT:0002707)both kidneys wet weight to body weight ratio (CMO:0000340)16285170915884239Rat
1300133Rf24Renal function QTL 243.64blood creatinine amount (VT:0005328)creatinine clearance (CMO:0000765)16338015021361552Rat
2306902Bp339Blood pressure QTL 3390.01arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)16338015043025077Rat
737825Alc13Alcohol consumption QTL 134.5consumption behavior trait (VT:0002069)ethanol drink intake rate (CMO:0001407)16422760916039848Rat
70183BpQTLcluster13Blood pressure QTL cluster 133.654arterial blood pressure trait (VT:2000000)diastolic blood pressure (CMO:0000005)16422760943025077Rat
70183BpQTLcluster13Blood pressure QTL cluster 133.654arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)16422760943025077Rat
70183BpQTLcluster13Blood pressure QTL cluster 133.654arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)16422760943025077Rat
737819Hcas4Hepatocarcinoma susceptibility QTL 44.43liver integrity trait (VT:0010547)volume of individual liver tumorous lesion (CMO:0001078)16422760946975965Rat
61405Niddm6Non-insulin dependent diabetes mellitus QTL 63.660.001blood glucose amount (VT:0000188)plasma glucose level (CMO:0000042)16422760948972724Rat
61338Bp23Blood pressure QTL 234.3arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)16422760949227609Rat
737826Alc11Alcohol consumption QTL 113.2consumption behavior trait (VT:0002069)ethanol drink intake rate (CMO:0001407)16422760960252231Rat
61372Bp40Blood pressure QTL 402.2blood pressure trait (VT:0000183)systolic blood pressure (CMO:0000004)16422773017696785Rat

Markers in Region
AI604979  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2166,921,423 - 6,921,508 (+)MAPPERmRatBN7.2
Rnor_6.0167,818,540 - 7,818,624NCBIRnor6.0
Rnor_5.0167,740,067 - 7,740,151UniSTSRnor5.0
RGSC_v3.4167,169,493 - 7,169,577UniSTSRGSC3.4
Celera168,276,737 - 8,276,821UniSTS
Cytogenetic Map16p16UniSTS
RH128789  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2166,918,608 - 6,918,817 (+)MAPPERmRatBN7.2
Rnor_6.0167,815,725 - 7,815,933NCBIRnor6.0
Rnor_5.0167,737,252 - 7,737,460UniSTSRnor5.0
RGSC_v3.4167,166,678 - 7,166,886UniSTSRGSC3.4
Celera168,279,428 - 8,279,636UniSTS
RH 3.4 Map1659.0UniSTS
Cytogenetic Map16p16UniSTS
RH129485  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2166,919,984 - 6,920,178 (+)MAPPERmRatBN7.2
Rnor_6.0167,817,101 - 7,817,294NCBIRnor6.0
Rnor_5.0167,738,628 - 7,738,821UniSTSRnor5.0
RGSC_v3.4167,168,054 - 7,168,247UniSTSRGSC3.4
Celera168,278,067 - 8,278,260UniSTS
RH 3.4 Map1662.9UniSTS
Cytogenetic Map16p16UniSTS
BF397906  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2166,920,851 - 6,921,015 (+)MAPPERmRatBN7.2
Rnor_6.0167,817,968 - 7,818,131NCBIRnor6.0
Rnor_5.0167,739,495 - 7,739,658UniSTSRnor5.0
RGSC_v3.4167,168,921 - 7,169,084UniSTSRGSC3.4
Celera168,277,230 - 8,277,393UniSTS
RH 3.4 Map1660.7UniSTS
Cytogenetic Map16p16UniSTS
BE108881  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2166,935,851 - 6,936,020 (+)MAPPERmRatBN7.2
Rnor_6.0167,832,967 - 7,833,135NCBIRnor6.0
Rnor_5.0167,754,494 - 7,754,662UniSTSRnor5.0
RGSC_v3.4167,183,920 - 7,184,088UniSTSRGSC3.4
Celera168,262,287 - 8,262,455UniSTS
RH 3.4 Map1660.8UniSTS
Cytogenetic Map16p16UniSTS
RH137004  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2166,959,773 - 6,959,926 (+)MAPPERmRatBN7.2
Rnor_6.0167,856,888 - 7,857,040NCBIRnor6.0
Rnor_5.0167,778,415 - 7,778,567UniSTSRnor5.0
RGSC_v3.4167,208,786 - 7,208,938UniSTSRGSC3.4
Celera168,238,456 - 8,238,608UniSTS
RH 3.4 Map1661.4UniSTS
Cytogenetic Map16p16UniSTS
UniSTS:237150  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2166,921,424 - 6,921,629 (+)MAPPERmRatBN7.2
Rnor_6.0167,818,541 - 7,818,745NCBIRnor6.0
Rnor_5.0167,740,068 - 7,740,272UniSTSRnor5.0
RGSC_v3.4167,169,494 - 7,169,698UniSTSRGSC3.4
Celera168,276,616 - 8,276,820UniSTS
Cytogenetic Map16p16UniSTS


Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system exocrine system hemolymphoid system hepatobiliary system integumental system musculoskeletal system nervous system renal system reproductive system respiratory system appendage
High
Medium 2 41 42 26 17 26 8 10 74 35 41 11 8
Low 1 2 15 15 2 15 1
Below cutoff

Sequence

Nucleotide Sequences
RefSeq Transcripts XM_001057687 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006222119 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006222120 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006222121 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006252707 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006252708 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_008771170 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017587538 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039094977 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039094978 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039094979 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039094980 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039094981 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039094982 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039094983 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039094984 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_005494817 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide CH474046 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JACYVU010000273 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: ENSRNOT00000026680   ⟹   ENSRNOP00000026680
RefSeq Status:
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl166,921,345 - 7,050,249 (-)Ensembl
Rnor_6.0 Ensembl167,818,667 - 7,928,518 (-)Ensembl
RefSeq Acc Id: ENSRNOT00000094533   ⟹   ENSRNOP00000089722
RefSeq Status:
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl166,921,345 - 7,000,980 (-)Ensembl
RefSeq Acc Id: ENSRNOT00000098800   ⟹   ENSRNOP00000078059
RefSeq Status:
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl166,921,345 - 7,000,643 (-)Ensembl
RefSeq Acc Id: ENSRNOT00000112368   ⟹   ENSRNOP00000081029
RefSeq Status:
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl166,914,336 - 7,050,249 (-)Ensembl
RefSeq Acc Id: ENSRNOT00000120315   ⟹   ENSRNOP00000095965
RefSeq Status:
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl166,914,336 - 7,026,181 (-)Ensembl
RefSeq Acc Id: XM_039094977   ⟹   XP_038950905
RefSeq Status:
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2166,918,487 - 6,999,245 (-)NCBI
RefSeq Acc Id: XM_039094978   ⟹   XP_038950906
RefSeq Status:
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2166,921,750 - 7,050,244 (-)NCBI
RefSeq Acc Id: XM_039094979   ⟹   XP_038950907
RefSeq Status:
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2166,921,750 - 7,050,244 (-)NCBI
RefSeq Acc Id: XM_039094980   ⟹   XP_038950908
RefSeq Status:
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2166,921,750 - 7,000,694 (-)NCBI
RefSeq Acc Id: XM_039094981   ⟹   XP_038950909
RefSeq Status:
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2166,921,750 - 7,050,244 (-)NCBI
RefSeq Acc Id: XM_039094982   ⟹   XP_038950910
RefSeq Status:
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2166,921,750 - 7,050,244 (-)NCBI
RefSeq Acc Id: XM_039094983   ⟹   XP_038950911
RefSeq Status:
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2166,921,750 - 7,001,080 (-)NCBI
RefSeq Acc Id: XM_039094984   ⟹   XP_038950912
RefSeq Status:
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2166,918,490 - 6,963,871 (-)NCBI
RefSeq Acc Id: XR_005494817
RefSeq Status:
Type: NON-CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2166,921,897 - 7,000,695 (-)NCBI
Reference Sequences
RefSeq Acc Id: ENSRNOP00000026680   ⟸   ENSRNOT00000026680
RefSeq Acc Id: XP_038950905   ⟸   XM_039094977
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038950912   ⟸   XM_039094984
- Peptide Label: isoform X5
RefSeq Acc Id: XP_038950909   ⟸   XM_039094981
- Peptide Label: isoform X4
- UniProtKB: A0A8I5Y6T8 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038950906   ⟸   XM_039094978
- Peptide Label: isoform X2
- UniProtKB: A0A8I5ZRD0 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038950910   ⟸   XM_039094982
- Peptide Label: isoform X4
- UniProtKB: A0A8I5Y6T8 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038950907   ⟸   XM_039094979
- Peptide Label: isoform X3
- UniProtKB: F1M400 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038950911   ⟸   XM_039094983
- Peptide Label: isoform X4
- UniProtKB: A0A8I5Y6T8 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038950908   ⟸   XM_039094980
- Peptide Label: isoform X4
- UniProtKB: A0A8I5Y6T8 (UniProtKB/TrEMBL)
RefSeq Acc Id: ENSRNOP00000081029   ⟸   ENSRNOT00000112368
RefSeq Acc Id: ENSRNOP00000095965   ⟸   ENSRNOT00000120315
RefSeq Acc Id: ENSRNOP00000089722   ⟸   ENSRNOT00000094533
RefSeq Acc Id: ENSRNOP00000078059   ⟸   ENSRNOT00000098800

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-F1M400-F1-model_v2 AlphaFold F1M400 1-1078 view protein structure

Transcriptome

eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen


Additional Information

Database Acc Id Source(s)
AGR Gene RGD:1559931 AgrOrtholog
BioCyc Gene G2FUF-12135 BioCyc
Ensembl Genes ENSRNOG00000019697 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Protein ENSRNOP00000026680 ENTREZGENE
  ENSRNOP00000026680.7 UniProtKB/TrEMBL
  ENSRNOP00000078059 ENTREZGENE
  ENSRNOP00000078059.1 UniProtKB/TrEMBL
  ENSRNOP00000081029 ENTREZGENE
  ENSRNOP00000081029.1 UniProtKB/TrEMBL
  ENSRNOP00000089722 ENTREZGENE
  ENSRNOP00000089722.1 UniProtKB/TrEMBL
  ENSRNOP00000095965.1 UniProtKB/TrEMBL
Ensembl Transcript ENSRNOT00000026680 ENTREZGENE
  ENSRNOT00000026680.8 UniProtKB/TrEMBL
  ENSRNOT00000094533 ENTREZGENE
  ENSRNOT00000094533.1 UniProtKB/TrEMBL
  ENSRNOT00000098800 ENTREZGENE
  ENSRNOT00000098800.1 UniProtKB/TrEMBL
  ENSRNOT00000112368 ENTREZGENE
  ENSRNOT00000112368.1 UniProtKB/TrEMBL
  ENSRNOT00000120315.1 UniProtKB/TrEMBL
Gene3D-CATH 1.25.40.20 UniProtKB/TrEMBL
InterPro Ankyrin_rpt UniProtKB/TrEMBL
  Ankyrin_rpt-contain_sf UniProtKB/TrEMBL
NCBI Gene 306264 ENTREZGENE
Pfam Ank UniProtKB/TrEMBL
  Ank_2 UniProtKB/TrEMBL
  Ank_4 UniProtKB/TrEMBL
PhenoGen Ankrd28 PhenoGen
PRINTS ANKYRIN UniProtKB/TrEMBL
PROSITE ANK_REPEAT UniProtKB/TrEMBL
SMART ANK UniProtKB/TrEMBL
Superfamily-SCOP ANK UniProtKB/TrEMBL
UniProt A0A8I5Y6T8 ENTREZGENE, UniProtKB/TrEMBL
  A0A8I5ZRD0 ENTREZGENE, UniProtKB/TrEMBL
  A0A8I6APS9_RAT UniProtKB/TrEMBL
  A0A8I6GHK6_RAT UniProtKB/TrEMBL
  F1M400 ENTREZGENE, UniProtKB/TrEMBL


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2015-07-29 Ankrd28  ankyrin repeat domain 28  LOC102549679  serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit A-like  Data Merged 737654 PROVISIONAL
2013-12-18 LOC102549679  serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit A-like      Symbol and Name status set to provisional 70820 PROVISIONAL
2008-02-28 Ankrd28  ankyrin repeat domain 28  RGD1559931_predicted  similar to Ankyrin repeat domain protein 28 (predicted)  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2006-03-07 RGD1559931_predicted  similar to Ankyrin repeat domain protein 28 (predicted)  LOC306264  similar to Ankyrin repeat domain protein 28  Symbol and Name status set to approved 1299863 APPROVED
2006-02-09 LOC306264  similar to Ankyrin repeat domain protein 28      Symbol and Name status set to provisional 70820 PROVISIONAL