Ankrd28 (ankyrin repeat domain 28) - Rat Genome Database

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Gene: Ankrd28 (ankyrin repeat domain 28) Rattus norvegicus
Analyze
Symbol: Ankrd28
Name: ankyrin repeat domain 28
RGD ID: 1559931
Description: Predicted to enable protein phosphatase regulator activity. Predicted to be involved in positive regulation of focal adhesion assembly. Predicted to be located in cytosol and lamellipodium. Predicted to be part of protein serine/threonine phosphatase complex. Orthologous to human ANKRD28 (ankyrin repeat domain 28); INTERACTS WITH 17beta-estradiol; 2,3,7,8-tetrachlorodibenzodioxine; bisphenol A.
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: LOC102549679; LOC306264; RGD1559931; serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit A; serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit A-like; similar to Ankyrin repeat domain protein 28
RGD Orthologs
Human
Mouse
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: GRCr8 - GRCr8 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8166,924,868 - 7,056,593 (-)NCBIGRCr8GRCr8GRCr8
GRCr8 Ensembl166,924,882 - 7,056,593 (-)EnsemblGRCr8
mRatBN7.2166,918,487 - 7,050,244 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl166,914,336 - 7,050,249 (-)EnsemblmRatBN7.2
Rnor_6.0167,816,876 - 7,879,023 (-)NCBIRnor_6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl167,818,667 - 7,928,518 (-)Ensemblrn6Rnor6.0
Rnor_5.0167,737,522 - 7,800,288 (-)NCBIRnor_5.0Rnor_5.0rn5
RGSC_v3.4167,166,559 - 7,248,739 (-)NCBIRGSC_v3.4RGSC_v3.4rn4
Celera168,148,113 - 8,278,476 (+)NCBICelera
Cytogenetic Map16p16NCBI
JBrowse:




Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Function

References

References - curated
# Reference Title Reference Citation
1. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions

Genomics

Comparative Map Data
Ankrd28
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8166,924,868 - 7,056,593 (-)NCBIGRCr8GRCr8GRCr8
GRCr8 Ensembl166,924,882 - 7,056,593 (-)EnsemblGRCr8
mRatBN7.2166,918,487 - 7,050,244 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl166,914,336 - 7,050,249 (-)EnsemblmRatBN7.2
Rnor_6.0167,816,876 - 7,879,023 (-)NCBIRnor_6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl167,818,667 - 7,928,518 (-)Ensemblrn6Rnor6.0
Rnor_5.0167,737,522 - 7,800,288 (-)NCBIRnor_5.0Rnor_5.0rn5
RGSC_v3.4167,166,559 - 7,248,739 (-)NCBIRGSC_v3.4RGSC_v3.4rn4
Celera168,148,113 - 8,278,476 (+)NCBICelera
Cytogenetic Map16p16NCBI
ANKRD28
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38315,667,236 - 15,859,814 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl315,667,236 - 15,859,771 (-)Ensemblhg38GRCh38
GRCh37315,708,743 - 15,901,321 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 36315,683,747 - 15,876,057 (-)NCBIBuild 36Build 36hg18NCBI36
Build 34315,700,252 - 15,813,337NCBI
Celera315,646,877 - 15,840,010 (-)NCBICelera
Cytogenetic Map3p25.1NCBI
HuRef315,643,973 - 15,836,592 (-)NCBIHuRef
CHM1_1315,659,447 - 15,852,157 (-)NCBICHM1_1
T2T-CHM13v2.0315,669,546 - 15,862,982 (-)NCBIT2T-CHM13v2.0
Ankrd28
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391431,418,687 - 31,552,374 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1431,420,725 - 31,552,608 (-)EnsemblGRCm39 EnsemblGRCm39
GRCm381431,698,768 - 31,830,567 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1431,698,768 - 31,830,651 (-)Ensemblmm10GRCm38
MGSCv371432,513,201 - 32,643,601 (-)NCBIMGSCv37MGSCv37mm9NCBIm37
MGSCv361430,529,024 - 30,659,424 (-)NCBIMGSCv36mm8
Celera1427,958,335 - 28,088,802 (-)NCBICelera
Cytogenetic Map14BNCBI
cM Map1419.4NCBI
Ankrd28
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554308,014,583 - 8,197,434 (-)Ensembl
ChiLan1.0NW_0049554308,014,631 - 8,197,434 (-)NCBIChiLan1.0ChiLan1.0
ANKRD28
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2215,651,816 - 15,845,914 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1315,656,580 - 15,850,704 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0315,591,890 - 15,785,997 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.1315,928,978 - 16,122,608 (-)NCBIPanPan1.1PanPan1.1panPan2
PanPan1.1 Ensembl315,932,020 - 16,057,647 (-)EnsemblpanPan2panpan1.1
ANKRD28
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.12326,824,219 - 27,012,601 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl2326,823,479 - 27,010,908 (+)EnsemblcanFam3CanFam3.1
Dog10K_Boxer_Tasha2326,799,385 - 26,988,667 (+)NCBIDog10K_Boxer_TashaDog10K_Boxer_Tasha
ROS_Cfam_1.02327,326,011 - 27,516,914 (+)NCBIROS_Cfam_1.0ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl2327,326,086 - 27,515,793 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.12327,108,061 - 27,216,255 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.02327,088,868 - 27,278,144 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.02327,337,409 - 27,526,786 (+)NCBIUU_Cfam_GSD_1.0UU_Cfam_GSD_1.0
Ankrd28
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024405118175,412,381 - 175,592,059 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049364738,550,950 - 8,730,902 (-)EnsemblSpeTri2.0 Ensembl
SpeTri2.0NW_0049364738,550,851 - 8,730,845 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
ANKRD28
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl132,922,853 - 3,135,709 (-)EnsemblsusScr11Sscrofa11.1
Sscrofa11.1132,922,855 - 3,135,743 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2133,071,720 - 3,208,254 (-)NCBISscrofa10.2Sscrofa10.2susScr3
ANKRD28
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11560,492,121 - 60,681,487 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl1560,491,029 - 60,617,911 (-)EnsemblChlSab1.1 EnsemblchlSab2Vervet-AGM
Vero_WHO_p1.0NW_02366604133,532,424 - 33,721,901 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Ankrd28
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_004624821965,854 - 1,155,128 (-)EnsemblHetGla_female_1.0 EnsemblhetGla2HetGla_female_1.0 Ensembl
HetGla 1.0NW_004624821964,162 - 1,155,437 (-)NCBIHetGla 1.0HetGla 1.0hetGla2

Variants

.
Variants in Ankrd28
518 total Variants
miRNA Target Status (No longer updated)

Predicted Target Of
Summary Value
Count of predictions:27
Count of miRNA genes:26
Interacting mature miRNAs:27
Transcripts:ENSRNOT00000026680
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCr8)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1582235Insul8Insulin level QTL 83.30.0063blood insulin amount (VT:0001560)calculated serum insulin level (CMO:0000359)16423421216278352Rat
1549842Bp248Blood pressure QTL 2480.01arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)1638712345387123Rat
2307172Activ4Activity QTL 43.710.00023locomotor behavior trait (VT:0001392)number of entries into a discrete space in an experimental apparatus (CMO:0000960)16133425095Rat
1354584Despr6Despair related QTL 63.10.0067locomotor behavior trait (VT:0001392)amount of time spent in voluntary immobility (CMO:0001043)16139568015Rat
737819Hcas4Hepatocarcinoma susceptibility QTL 44.43liver integrity trait (VT:0010547)volume of individual liver tumorous lesion (CMO:0001078)16423421253708481Rat
1354625Despr7Despair related QTL 73.160.016locomotor behavior trait (VT:0001392)amount of time spent in voluntary immobility (CMO:0001043)16474422249744222Rat
61338Bp23Blood pressure QTL 234.3arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)16423421216278352Rat
61405Niddm6Non-insulin dependent diabetes mellitus QTL 63.660.001blood glucose amount (VT:0000188)plasma glucose level (CMO:0000042)16126734272Rat
631830Alc7Alcohol consumption QTL 72.9consumption behavior trait (VT:0002069)ethanol drink intake rate (CMO:0001407)16126734272Rat
7411664Foco30Food consumption QTL 30110.001eating behavior trait (VT:0001431)feed conversion ratio (CMO:0001312)16435482249354822Rat
1600378Arunc4Aerobic running capacity QTL 40.03exercise endurance trait (VT:0002332)longest distance run on treadmill (CMO:0001406)1638712345387123Rat
70183BpQTLcluster13Blood pressure QTL cluster 133.654arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)16423421249757901Rat
737826Alc11Alcohol consumption QTL 113.2consumption behavior trait (VT:0002069)ethanol drink intake rate (CMO:0001407)16423421266955197Rat
737825Alc13Alcohol consumption QTL 134.5consumption behavior trait (VT:0002069)ethanol drink intake rate (CMO:0001407)16423421216061395Rat
2303566Bw90Body weight QTL 902body mass (VT:0001259)body weight (CMO:0000012)16139568015Rat
631524Bp75Blood pressure QTL 750.05arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)161177108157035Rat
2312663Slep9Serum leptin concentration QTL 90.001blood leptin amount (VT:0005667)serum leptin level (CMO:0000780)1683908666195506Rat
2306902Bp339Blood pressure QTL 3390.01arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)16338679049757901Rat
1300133Rf24Renal function QTL 243.64blood creatinine amount (VT:0005328)creatinine clearance (CMO:0000765)16338679026128267Rat
2312660Bw95Body weight QTL 950.05inguinal fat pad mass (VT:0010424)inguinal fat pad weight to body weight ratio (CMO:0001253)1683908666195506Rat
2312666Insul16Insulin level QTL 160.01blood insulin amount (VT:0001560)serum insulin level (CMO:0000358)1683908666195506Rat
634355Rends4Renal damage susceptibility QTL 40.05kidney blood vessel morphology trait (VT:0000530)organ lesion measurement (CMO:0000677)16126734272Rat
61372Bp40Blood pressure QTL 402.2blood pressure trait (VT:0000183)systolic blood pressure (CMO:0000004)16423433317730812Rat
2293343Glom16Glomerulus QTL 167.4kidney glomerulus integrity trait (VT:0010546)kidney sclerotic glomeruli count to total glomeruli count ratio (CMO:0001269)1683908652786090Rat
2312669Stl23Serum triglyceride level QTL 230.01blood triglyceride amount (VT:0002644)serum triglyceride level (CMO:0000360)1683908666195506Rat
6903319Bw114Body weight QTL 1142.70.0037body mass (VT:0001259)body weight (CMO:0000012)16330168348301683Rat

Markers in Region
AI604979  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2166,921,423 - 6,921,508 (+)MAPPERmRatBN7.2
Rnor_6.0167,818,540 - 7,818,624NCBIRnor6.0
Rnor_5.0167,740,067 - 7,740,151UniSTSRnor5.0
RGSC_v3.4167,169,493 - 7,169,577UniSTSRGSC3.4
Celera168,276,737 - 8,276,821UniSTS
Cytogenetic Map16p16UniSTS
RH128789  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2166,918,608 - 6,918,817 (+)MAPPERmRatBN7.2
Rnor_6.0167,815,725 - 7,815,933NCBIRnor6.0
Rnor_5.0167,737,252 - 7,737,460UniSTSRnor5.0
RGSC_v3.4167,166,678 - 7,166,886UniSTSRGSC3.4
Celera168,279,428 - 8,279,636UniSTS
RH 3.4 Map1659.0UniSTS
Cytogenetic Map16p16UniSTS
RH129485  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2166,919,984 - 6,920,178 (+)MAPPERmRatBN7.2
Rnor_6.0167,817,101 - 7,817,294NCBIRnor6.0
Rnor_5.0167,738,628 - 7,738,821UniSTSRnor5.0
RGSC_v3.4167,168,054 - 7,168,247UniSTSRGSC3.4
Celera168,278,067 - 8,278,260UniSTS
RH 3.4 Map1662.9UniSTS
Cytogenetic Map16p16UniSTS
BF397906  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2166,920,851 - 6,921,015 (+)MAPPERmRatBN7.2
Rnor_6.0167,817,968 - 7,818,131NCBIRnor6.0
Rnor_5.0167,739,495 - 7,739,658UniSTSRnor5.0
RGSC_v3.4167,168,921 - 7,169,084UniSTSRGSC3.4
Celera168,277,230 - 8,277,393UniSTS
RH 3.4 Map1660.7UniSTS
Cytogenetic Map16p16UniSTS
BE108881  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2166,935,851 - 6,936,020 (+)MAPPERmRatBN7.2
Rnor_6.0167,832,967 - 7,833,135NCBIRnor6.0
Rnor_5.0167,754,494 - 7,754,662UniSTSRnor5.0
RGSC_v3.4167,183,920 - 7,184,088UniSTSRGSC3.4
Celera168,262,287 - 8,262,455UniSTS
RH 3.4 Map1660.8UniSTS
Cytogenetic Map16p16UniSTS
RH137004  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2166,959,773 - 6,959,926 (+)MAPPERmRatBN7.2
Rnor_6.0167,856,888 - 7,857,040NCBIRnor6.0
Rnor_5.0167,778,415 - 7,778,567UniSTSRnor5.0
RGSC_v3.4167,208,786 - 7,208,938UniSTSRGSC3.4
Celera168,238,456 - 8,238,608UniSTS
RH 3.4 Map1661.4UniSTS
Cytogenetic Map16p16UniSTS
UniSTS:237150  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2166,921,424 - 6,921,629 (+)MAPPERmRatBN7.2
Rnor_6.0167,818,541 - 7,818,745NCBIRnor6.0
Rnor_5.0167,740,068 - 7,740,272UniSTSRnor5.0
RGSC_v3.4167,169,494 - 7,169,698UniSTSRGSC3.4
Celera168,276,616 - 8,276,820UniSTS
Cytogenetic Map16p16UniSTS


Expression

RNA-SEQ Expression

alimentary part of gastrointestinal system
appendage
circulatory system
ectoderm
endocrine system
endoderm
exocrine system
hemolymphoid system
hepatobiliary system
integumental system
mesenchyme
mesoderm
musculoskeletal system
nervous system
renal system
reproductive system
respiratory system
sensory system
visual system
16 12 67 164 91 90 59 92 59 6 356 192 11 143 81 92 31 17 17

Sequence

Nucleotide Sequences
RefSeq Transcripts NM_001427331 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_001057687 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006222119 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006222120 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006222121 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006252707 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006252708 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_008771170 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017587538 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039094977 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039094979 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039094980 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039094981 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039094983 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039094984 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063275354 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_005494817 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide CH474046 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAXUCZ010000016 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Ensembl Acc Id: ENSRNOT00000026680   ⟹   ENSRNOP00000026680
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl166,924,882 - 7,056,477 (-)Ensembl
mRatBN7.2 Ensembl166,921,345 - 7,050,249 (-)Ensembl
Rnor_6.0 Ensembl167,818,667 - 7,928,518 (-)Ensembl
Ensembl Acc Id: ENSRNOT00000094533   ⟹   ENSRNOP00000089722
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl166,924,882 - 7,056,478 (-)Ensembl
mRatBN7.2 Ensembl166,921,345 - 7,000,980 (-)Ensembl
Ensembl Acc Id: ENSRNOT00000098800   ⟹   ENSRNOP00000078059
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl166,924,882 - 7,055,421 (-)Ensembl
mRatBN7.2 Ensembl166,921,345 - 7,000,643 (-)Ensembl
Ensembl Acc Id: ENSRNOT00000112368   ⟹   ENSRNOP00000081029
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl166,924,882 - 7,056,593 (-)Ensembl
mRatBN7.2 Ensembl166,914,336 - 7,050,249 (-)Ensembl
Ensembl Acc Id: ENSRNOT00000120315   ⟹   ENSRNOP00000095965
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl166,924,882 - 7,032,558 (-)Ensembl
mRatBN7.2 Ensembl166,914,336 - 7,026,181 (-)Ensembl
Ensembl Acc Id: ENSRNOT00000142077   ⟹   ENSRNOP00000111956
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl166,924,882 - 7,056,593 (-)Ensembl
RefSeq Acc Id: NM_001427331   ⟹   NP_001414260
RefSeq Status: VALIDATED
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8166,924,868 - 7,056,593 (-)NCBI
RefSeq Acc Id: XM_039094977   ⟹   XP_038950905
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8166,924,868 - 7,007,089 (-)NCBI
mRatBN7.2166,918,487 - 6,999,245 (-)NCBI
RefSeq Acc Id: XM_039094979   ⟹   XP_038950907
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8166,924,868 - 7,056,575 (-)NCBI
mRatBN7.2166,921,750 - 7,050,244 (-)NCBI
RefSeq Acc Id: XM_039094980   ⟹   XP_038950908
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8166,924,868 - 7,005,610 (-)NCBI
mRatBN7.2166,921,750 - 7,000,694 (-)NCBI
RefSeq Acc Id: XM_039094981   ⟹   XP_038950909
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8166,924,868 - 7,056,575 (-)NCBI
mRatBN7.2166,921,750 - 7,050,244 (-)NCBI
RefSeq Acc Id: XM_039094983   ⟹   XP_038950911
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8166,924,868 - 7,007,588 (-)NCBI
mRatBN7.2166,921,750 - 7,001,080 (-)NCBI
RefSeq Acc Id: XM_039094984   ⟹   XP_038950912
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8166,924,868 - 6,970,252 (-)NCBI
mRatBN7.2166,918,490 - 6,963,871 (-)NCBI
RefSeq Acc Id: XM_063275354   ⟹   XP_063131424
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8166,924,868 - 7,052,081 (-)NCBI
RefSeq Acc Id: XR_005494817
Type: NON-CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8166,928,275 - 7,007,089 (-)NCBI
mRatBN7.2166,921,897 - 7,000,695 (-)NCBI
Ensembl Acc Id: ENSRNOP00000026680   ⟸   ENSRNOT00000026680
RefSeq Acc Id: XP_038950905   ⟸   XM_039094977
- Peptide Label: isoform X1
- UniProtKB: A0A8I6GHK6 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038950912   ⟸   XM_039094984
- Peptide Label: isoform X4
RefSeq Acc Id: XP_038950909   ⟸   XM_039094981
- Peptide Label: isoform X3
- UniProtKB: A0A8I5Y6T8 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038950907   ⟸   XM_039094979
- Peptide Label: isoform X2
- UniProtKB: F1M400 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038950911   ⟸   XM_039094983
- Peptide Label: isoform X3
- UniProtKB: A0A8I5Y6T8 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038950908   ⟸   XM_039094980
- Peptide Label: isoform X3
- UniProtKB: A0A8I5Y6T8 (UniProtKB/TrEMBL)
Ensembl Acc Id: ENSRNOP00000081029   ⟸   ENSRNOT00000112368
Ensembl Acc Id: ENSRNOP00000095965   ⟸   ENSRNOT00000120315
Ensembl Acc Id: ENSRNOP00000089722   ⟸   ENSRNOT00000094533
Ensembl Acc Id: ENSRNOP00000078059   ⟸   ENSRNOT00000098800
RefSeq Acc Id: NP_001414260   ⟸   NM_001427331
- UniProtKB: A0A8I5ZRD0 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_063131424   ⟸   XM_063275354
- Peptide Label: isoform X3
- UniProtKB: A0A8I5Y6T8 (UniProtKB/TrEMBL)
Ensembl Acc Id: ENSRNOP00000111956   ⟸   ENSRNOT00000142077

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-F1M400-F1-model_v2 AlphaFold F1M400 1-1078 view protein structure

Transcriptome

eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen


Additional Information

Database Acc Id Source(s)
AGR Gene RGD:1559931 AgrOrtholog
BioCyc Gene G2FUF-12135 BioCyc
Ensembl Genes ENSRNOG00000019697 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSRNOT00000026680.8 UniProtKB/TrEMBL
  ENSRNOT00000094533.1 UniProtKB/TrEMBL
  ENSRNOT00000098800 ENTREZGENE
  ENSRNOT00000098800.1 UniProtKB/TrEMBL
  ENSRNOT00000112368 ENTREZGENE
  ENSRNOT00000112368.1 UniProtKB/TrEMBL
  ENSRNOT00000120315.1 UniProtKB/TrEMBL
  ENSRNOT00000142077 ENTREZGENE
Gene3D-CATH 1.25.40.20 UniProtKB/TrEMBL
InterPro Ankyrin_rpt UniProtKB/TrEMBL
  Ankyrin_rpt-contain_sf UniProtKB/TrEMBL
  Multifunctional_ANK_Repeat UniProtKB/TrEMBL
NCBI Gene 306264 ENTREZGENE
PANTHER ANKYRIN REPEAT AND PROTEIN KINASE DOMAIN-CONTAINING PROTEIN UniProtKB/TrEMBL
  ANKYRIN REPEAT-CONTAINING UniProtKB/TrEMBL
  SERINE_THREONINE-PROTEIN PHOSPHATASE 6 REGULATORY ANKYRIN REPEAT SUBUNIT A UniProtKB/TrEMBL
  SERINE_THREONINE-PROTEIN PHOSPHATASE 6 REGULATORY ANKYRIN REPEAT SUBUNIT A UniProtKB/TrEMBL
Pfam Ank UniProtKB/TrEMBL
  Ank_2 UniProtKB/TrEMBL
  Ank_4 UniProtKB/TrEMBL
PhenoGen Ankrd28 PhenoGen
PRINTS ANKYRIN UniProtKB/TrEMBL
PROSITE ANK_REP_REGION UniProtKB/TrEMBL
  ANK_REPEAT UniProtKB/TrEMBL
RatGTEx ENSRNOG00000019697 RatGTEx
SMART ANK UniProtKB/TrEMBL
Superfamily-SCOP ANK UniProtKB/TrEMBL
UniProt A0A8I5Y6T8 ENTREZGENE, UniProtKB/TrEMBL
  A0A8I5ZRD0 ENTREZGENE, UniProtKB/TrEMBL
  A0A8I6APS9_RAT UniProtKB/TrEMBL
  A0A8I6GHK6 ENTREZGENE, UniProtKB/TrEMBL
  F1M400 ENTREZGENE, UniProtKB/TrEMBL


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2015-07-29 Ankrd28  ankyrin repeat domain 28  LOC102549679  serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit A-like  Data merged from RGD:7699305 737654 PROVISIONAL
2013-12-18 LOC102549679  serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit A-like      Symbol and Name status set to provisional 70820 PROVISIONAL
2008-02-28 Ankrd28  ankyrin repeat domain 28  RGD1559931_predicted  similar to Ankyrin repeat domain protein 28 (predicted)  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2006-03-07 RGD1559931_predicted  similar to Ankyrin repeat domain protein 28 (predicted)  LOC306264  similar to Ankyrin repeat domain protein 28  Symbol and Name status set to approved 1299863 APPROVED
2006-02-09 LOC306264  similar to Ankyrin repeat domain protein 28      Symbol and Name status set to provisional 70820 PROVISIONAL