Zfp637 (zinc finger protein 637) - Rat Genome Database

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Gene: Zfp637 (zinc finger protein 637) Rattus norvegicus
Analyze
Symbol: Zfp637
Name: zinc finger protein 637
RGD ID: 1559850
Description: Predicted to enable DNA-binding transcription factor activity, RNA polymerase II-specific and RNA polymerase II cis-regulatory region sequence-specific DNA binding activity. Predicted to be involved in regulation of transcription by RNA polymerase II. Predicted to be located in nucleus. Orthologous to human ZNF32 (zinc finger protein 32); INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine; 2,4-dinitrotoluene; ammonium chloride.
Type: protein-coding
RefSeq Status: PROVISIONAL
Previously known as: AZF1; DZF11; zinc finger protein 1; zinc finger protein 11; zinc finger protein 32
RGD Orthologs
Human
Mouse
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: mRatBN7.2 - mRatBN7.2 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr84152,656,937 - 152,682,499 (+)NCBIGRCr8
mRatBN7.24150,984,940 - 151,010,079 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl4150,984,541 - 151,011,874 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx4157,267,793 - 157,272,418 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.04153,051,712 - 153,056,337 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.04151,674,723 - 151,679,348 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.04149,857,127 - 149,882,828 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl4149,877,889 - 149,882,824 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.04215,786,335 - 215,812,038 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.44154,128,969 - 154,133,744 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
Celera4139,881,935 - 139,886,586 (+)NCBICelera
Cytogenetic Map4q42NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component
nucleoplasm  (IEA)
nucleus  (ISO)

References

References - curated
# Reference Title Reference Citation
1. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2. Identification and characterization of zinc finger encoding genes from the tumoral exocrine pancreatic cell line AR42J. Mesa K, etal., Cancer Lett 1996 Jun 5;103(2):143-9.
3. GOA pipeline RGD automated data pipeline
4. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:8697448   PMID:12477932  


Genomics

Comparative Map Data
Zfp637
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr84152,656,937 - 152,682,499 (+)NCBIGRCr8
mRatBN7.24150,984,940 - 151,010,079 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl4150,984,541 - 151,011,874 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx4157,267,793 - 157,272,418 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.04153,051,712 - 153,056,337 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.04151,674,723 - 151,679,348 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.04149,857,127 - 149,882,828 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl4149,877,889 - 149,882,824 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.04215,786,335 - 215,812,038 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.44154,128,969 - 154,133,744 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
Celera4139,881,935 - 139,886,586 (+)NCBICelera
Cytogenetic Map4q42NCBI
ZNF32
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381043,643,862 - 43,648,881 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1043,643,860 - 43,648,881 (-)EnsemblGRCh38hg38GRCh38
GRCh371044,139,310 - 44,144,329 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 361043,459,313 - 43,464,332 (-)NCBINCBI36Build 36hg18NCBI36
Build 341043,459,313 - 43,464,332NCBI
Celera1040,142,942 - 40,147,961 (-)NCBICelera
Cytogenetic Map10q11.21NCBI
HuRef1040,666,312 - 40,671,331 (-)NCBIHuRef
CHM1_11044,178,919 - 44,183,938 (-)NCBICHM1_1
T2T-CHM13v2.01044,524,781 - 44,529,800 (-)NCBIT2T-CHM13v2.0
Zfp637
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm396117,818,165 - 117,822,917 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl6117,818,141 - 117,822,917 (+)EnsemblGRCm39 Ensembl
GRCm386117,840,588 - 117,845,957 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl6117,841,180 - 117,845,956 (+)EnsemblGRCm38mm10GRCm38
MGSCv376117,791,260 - 117,795,974 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv366117,806,861 - 117,811,575 (+)NCBIMGSCv36mm8
Celera6119,661,395 - 119,666,109 (+)NCBICelera
Cytogenetic Map6F1NCBI
cM Map655.59NCBI
Znf32
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049555461,475,968 - 1,481,422 (-)EnsemblChiLan1.0
ChiLan1.0NW_0049555461,475,968 - 1,481,436 (-)NCBIChiLan1.0ChiLan1.0
ZNF32
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2856,366,606 - 56,372,240 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11056,371,934 - 56,377,804 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01040,626,745 - 40,632,364 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11043,807,785 - 43,812,817 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1043,807,785 - 43,812,716 (-)Ensemblpanpan1.1panPan2
ZNF32
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1283,484,504 - 3,489,768 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl283,484,551 - 3,489,577 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha283,718,093 - 3,723,368 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0283,663,556 - 3,668,832 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl283,663,486 - 3,668,641 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1283,461,043 - 3,466,319 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0283,503,089 - 3,508,365 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0283,638,043 - 3,643,319 (+)NCBIUU_Cfam_GSD_1.0
Znf32
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440721383,278,033 - 83,282,243 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049366173,500,480 - 3,505,952 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049366173,501,738 - 3,505,943 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
ZNF32
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1492,151,255 - 92,156,075 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11492,151,231 - 92,156,077 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.214100,716,469 - 100,717,406 (-)NCBISscrofa10.2Sscrofa10.2susScr3
ZNF32
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1939,297,149 - 39,302,680 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl939,297,079 - 39,302,669 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366605647,159,487 - 47,164,939 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Znf32
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_004624922704,365 - 709,377 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_004624922700,927 - 709,812 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in Zfp637
116 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:28
Count of miRNA genes:24
Interacting mature miRNAs:28
Transcripts:ENSRNOT00000038521
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (mRatBN7.2)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
61362Oia2Oil induced arthritis QTL 20.001joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)4138503169173369699Rat
61406Scwia1Streptococcal cell wall induced arthritis QTL 12.3joint integrity trait (VT:0010548)experimental arthritis severity measurement (CMO:0001459)4106805662151805662Rat
61422Cia13Collagen induced arthritis QTL 134.5joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)4132642577167139601Rat
70177Xhs1X-ray hypersensitivity QTL 125.1intestine integrity trait (VT:0010554)post-insult time to onset of moribundity (CMO:0001896)482798864152731274Rat
61446Coreg2Compensatory renal growth QTL 23.5kidney mass (VT:0002707)compensatory renal growth score (CMO:0001894)4148423102157580971Rat
61451Ciaa4CIA Autoantibody QTL 43.1blood autoantibody amount (VT:0003725)calculated serum anti-rat type 2 collagen autoantibody titer (CMO:0001281)4126395976167139601Rat
724535Cm18Cardiac mass QTL 182.6heart mass (VT:0007028)calculated heart weight (CMO:0000073)4118856416163856416Rat
724558Plsm2Polydactyly-luxate syndrome (PLS) morphotypes QTL 20.0003hindlimb integrity trait (VT:0010563)hind foot phalanges count (CMO:0001949)4132422778177422778Rat
731165Uae21Urinary albumin excretion QTL 212.40.0001urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)4106649412151649412Rat
737821Hcar9Hepatocarcinoma resistance QTL 93.7liver integrity trait (VT:0010547)volume of individual liver tumorous lesion (CMO:0001078)4109866907167139601Rat
631674Iddm14Insulin dependent diabetes mellitus QTL 14blood glucose amount (VT:0000188)plasma glucose level (CMO:0000042)464528739157573521Rat
631683Bp116Blood pressure QTL 1160.0001arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)4124303370169303370Rat
737978Pia23Pristane induced arthritis QTL 235.3joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)4131730738167139601Rat
1298524Oia8Oil induced arthritis QTL 8joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)4138503169173369699Rat
738009Sach4Saccharine consumption QTL 44.90.000016consumption behavior trait (VT:0002069)saccharin intake volume to total fluid intake volume ratio (CMO:0001601)459948935154902892Rat
738016Alc16Alcohol consumption QTL 163.60.00015consumption behavior trait (VT:0002069)ethanol drink intake rate to body weight ratio (CMO:0001616)459948935154902892Rat
738031Alc14Alcohol consumption QTL 147.60.00003consumption behavior trait (VT:0002069)ethanol drink intake rate to body weight ratio (CMO:0001616)459948935154902892Rat
631511Pia7Pristane induced arthritis QTL 74.3joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)4131730738167139601Rat
634335Anxrr16Anxiety related response QTL 167.22locomotor behavior trait (VT:0001392)number of entries into a discrete space in an experimental apparatus (CMO:0000960)493308457167139447Rat
634342Cia24Collagen induced arthritis QTL 244.5joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)4146565735175236377Rat
634347Hcar8Hepatocarcinoma resistance QTL 85.8liver integrity trait (VT:0010547)liver tumorous lesion area to total liver area ratio (CMO:0001075)4123143783168143783Rat
1300116Hrtrt5Heart rate QTL 53.76heart pumping trait (VT:2000009)heart rate (CMO:0000002)4116179486151161268Rat
1331738Bp209Blood pressure QTL 2092.979arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)4138503169179293946Rat
1331759Hrtrt13Heart rate QTL 133.54628heart pumping trait (VT:2000009)heart rate (CMO:0000002)4110275411168266883Rat
1331802Srn5Serum renin concentration QTL 53.045renin activity (VT:0005581)plasma renin activity level (CMO:0000116)4119428175157578333Rat
1358202Gluco11Glucose level QTL 112.40.02adipocyte glucose uptake trait (VT:0004185)absolute change in adipocyte glucose uptake (CMO:0000873)485379421167139601Rat
1549827Scl46Serum cholesterol level QTL 463.5blood cholesterol amount (VT:0000180)serum total cholesterol level (CMO:0000363)4132396220177396220Rat
1549832Bss3Bone structure and strength QTL 311femur morphology trait (VT:0000559)femur midshaft cortical cross-sectional area (CMO:0001663)4109827074154827074Rat
1582237Kidm34Kidney mass QTL 3440.0001kidney mass (VT:0002707)both kidneys wet weight to body weight ratio (CMO:0000340)4148090542168069246Rat
1576305Emca6Estrogen-induced mammary cancer QTL 65.8mammary gland integrity trait (VT:0010552)mammary tumor number (CMO:0000343)444463720155883716Rat
1576316Ept5Estrogen-induced pituitary tumorigenesis QTL 53.8pituitary gland mass (VT:0010496)pituitary gland wet weight (CMO:0000853)483428419177635233Rat
1578674Bmd12Bone mineral density QTL 123.8femur mineral mass (VT:0010011)compact volumetric bone mineral density (CMO:0001730)4135699135180699135Rat
2293659Bmd35Bone mineral density QTL 354.50.0001femur strength trait (VT:0010010)femoral neck ultimate force (CMO:0001703)4137755016181392681Rat
2303623Vencon2Ventilatory control QTL 23.8respiration trait (VT:0001943)minute ventilation (CMO:0000132)4135204660180204660Rat
2316958Gluco58Glucose level QTL 5810blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)411320076180699135Rat
6478718Anxrr34Anxiety related response QTL 340.00896locomotor behavior trait (VT:0001392)amount of experiment time spent in a discrete space in an experimental apparatus (CMO:0000958)4144639524182687754Rat
6478748Anxrr42Anxiety related response QTL 420.28008locomotor behavior trait (VT:0001392)amount of experiment time spent in a discrete space in an experimental apparatus (CMO:0000958)4144639524182687754Rat
6478754Anxrr43Anxiety related response QTL 430.14035locomotor behavior trait (VT:0001392)distance moved per unit of time into, out of or within a discrete space in an experimental apparatus (CMO:0001493)4144639524182687754Rat
6478760Anxrr45Anxiety related response QTL 450.06717locomotor behavior trait (VT:0001392)amount of experiment time spent in a discrete space in an experimental apparatus (CMO:0000958)4110870972155870972Rat
6478763Anxrr46Anxiety related response QTL 460.07428locomotor behavior trait (VT:0001392)amount of experiment time spent in a discrete space in an experimental apparatus (CMO:0000958)4110870972155870972Rat
6478778Anxrr51Anxiety related response QTL 510.25384locomotor behavior trait (VT:0001392)measurement of voluntary locomotion into, out of or within a discrete space in an experimental apparatus (CMO:0000957)4124778595169778595Rat
6478693Anxrr32Anxiety related response QTL 320.00092locomotor behavior trait (VT:0001392)measurement of voluntary locomotion into, out of or within a discrete space in an experimental apparatus (CMO:0000957)4144639524182687754Rat
6478700Anxrr33Anxiety related response QTL 330.00896locomotor behavior trait (VT:0001392)amount of experiment time spent in a discrete space in an experimental apparatus (CMO:0000958)4144639524182687754Rat
7411558Bw133Body weight QTL 13313.840.001body mass (VT:0001259)body weight gain (CMO:0000420)4125590636170590636Rat
7207480Bss105Bone structure and strength QTL 1058.1femur strength trait (VT:0010010)femur midshaft polar moment of inertia (CMO:0001669)4109827074154827074Rat
10401796Kidm48Kidney mass QTL 48kidney mass (VT:0002707)both kidneys wet weight (CMO:0000085)4145568712182687754Rat
12798525Anxrr57Anxiety related response QTL 573.210.05locomotor behavior trait (VT:0001392)amount of experiment time spent in a discrete space in an experimental apparatus (CMO:0000958)4147278504167139601Rat
12798519Anxrr54Anxiety related response QTL 542.540.05locomotor behavior trait (VT:0001392)distance moved per unit of time into, out of or within a discrete space in an experimental apparatus (CMO:0001493)4114627026159627026Rat

Markers in Region
RH128222  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.24151,009,793 - 151,009,983 (+)MAPPERmRatBN7.2
Rnor_6.04149,882,543 - 149,882,732NCBIRnor6.0
Rnor_5.04215,811,753 - 215,811,942UniSTSRnor5.0
RGSC_v3.44154,133,462 - 154,133,651UniSTSRGSC3.4
Celera4139,886,304 - 139,886,493UniSTS
Cytogenetic Map4q42UniSTS
RH141793  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.24151,007,590 - 151,007,802 (+)MAPPERmRatBN7.2
Rnor_6.04149,880,340 - 149,880,551NCBIRnor6.0
Rnor_5.04215,809,550 - 215,809,761UniSTSRnor5.0
RGSC_v3.44154,131,259 - 154,131,470UniSTSRGSC3.4
Celera4139,884,101 - 139,884,312UniSTS
RH 3.4 Map4991.32UniSTS
Cytogenetic Map4q42UniSTS


Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system exocrine system hemolymphoid system hepatobiliary system integumental system musculoskeletal system nervous system renal system reproductive system respiratory system appendage
High
Medium 3 43 57 41 19 41 8 11 74 35 41 11 8
Low
Below cutoff

Sequence

Nucleotide Sequences
RefSeq Transcripts NM_001134908 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006237193 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017592702 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039107865 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063286307 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063286308 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063286309 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063286310 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063286311 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063286312 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063286313 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063286314 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063286315 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063286316 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063286317 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063286318 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063286319 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063286320 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_010065677 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_010065678 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide BC158822 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH473964 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ213084 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAXUCZ010000004 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  U78112 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  U78139 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

RefSeq Acc Id: ENSRNOT00000038521   ⟹   ENSRNOP00000037628
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl4151,005,305 - 151,011,874 (+)Ensembl
Rnor_6.0 Ensembl4149,877,889 - 149,882,824 (+)Ensembl
RefSeq Acc Id: ENSRNOT00000104853   ⟹   ENSRNOP00000087762
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl4150,984,541 - 151,011,693 (+)Ensembl
RefSeq Acc Id: ENSRNOT00000105993   ⟹   ENSRNOP00000094186
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl4150,984,541 - 151,011,693 (+)Ensembl
RefSeq Acc Id: ENSRNOT00000115743   ⟹   ENSRNOP00000078396
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl4151,008,004 - 151,011,874 (+)Ensembl
RefSeq Acc Id: NM_001134908   ⟹   NP_001128380
RefSeq Status: PROVISIONAL
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr84152,677,746 - 152,682,496 (+)NCBI
mRatBN7.24151,005,325 - 151,010,076 (+)NCBI
Rnor_6.04149,877,889 - 149,882,825 (+)NCBI
Rnor_5.04215,786,335 - 215,812,038 (+)NCBI
RGSC_v3.44154,128,969 - 154,133,744 (+)RGD
Celera4139,881,935 - 139,886,586 (+)RGD
Sequence:
RefSeq Acc Id: XM_006237193   ⟹   XP_006237255
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr84152,656,937 - 152,682,499 (+)NCBI
mRatBN7.24150,984,944 - 151,010,079 (+)NCBI
Rnor_6.04149,857,127 - 149,882,828 (+)NCBI
Rnor_5.04215,786,335 - 215,812,038 (+)NCBI
Sequence:
RefSeq Acc Id: XM_039107865   ⟹   XP_038963793
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr84152,656,970 - 152,682,499 (+)NCBI
mRatBN7.24150,985,010 - 151,010,079 (+)NCBI
RefSeq Acc Id: XM_063286307   ⟹   XP_063142377
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr84152,656,969 - 152,682,499 (+)NCBI
RefSeq Acc Id: XM_063286308   ⟹   XP_063142378
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr84152,656,956 - 152,682,499 (+)NCBI
RefSeq Acc Id: XM_063286309   ⟹   XP_063142379
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr84152,656,970 - 152,682,499 (+)NCBI
RefSeq Acc Id: XM_063286310   ⟹   XP_063142380
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr84152,656,970 - 152,682,499 (+)NCBI
RefSeq Acc Id: XM_063286311   ⟹   XP_063142381
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr84152,656,937 - 152,682,499 (+)NCBI
RefSeq Acc Id: XM_063286312   ⟹   XP_063142382
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr84152,656,939 - 152,682,499 (+)NCBI
RefSeq Acc Id: XM_063286313   ⟹   XP_063142383
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr84152,656,965 - 152,682,499 (+)NCBI
RefSeq Acc Id: XM_063286314   ⟹   XP_063142384
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr84152,656,969 - 152,682,499 (+)NCBI
RefSeq Acc Id: XM_063286315   ⟹   XP_063142385
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr84152,656,970 - 152,682,499 (+)NCBI
RefSeq Acc Id: XM_063286316   ⟹   XP_063142386
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr84152,677,796 - 152,682,499 (+)NCBI
RefSeq Acc Id: XM_063286317   ⟹   XP_063142387
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr84152,656,962 - 152,682,499 (+)NCBI
RefSeq Acc Id: XM_063286318   ⟹   XP_063142388
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr84152,656,968 - 152,682,499 (+)NCBI
RefSeq Acc Id: XM_063286319   ⟹   XP_063142389
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr84152,656,971 - 152,682,499 (+)NCBI
RefSeq Acc Id: XM_063286320   ⟹   XP_063142390
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr84152,656,954 - 152,682,499 (+)NCBI
RefSeq Acc Id: XR_010065677
Type: NON-CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr84152,656,954 - 152,682,499 (+)NCBI
RefSeq Acc Id: XR_010065678
Type: NON-CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr84152,656,952 - 152,682,499 (+)NCBI
RefSeq Acc Id: NP_001128380   ⟸   NM_001134908
- UniProtKB: B0BNH4 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006237255   ⟸   XM_006237193
- Peptide Label: isoform X2
- Sequence:
RefSeq Acc Id: ENSRNOP00000037628   ⟸   ENSRNOT00000038521
RefSeq Acc Id: XP_038963793   ⟸   XM_039107865
- Peptide Label: isoform X3
RefSeq Acc Id: ENSRNOP00000094186   ⟸   ENSRNOT00000105993
RefSeq Acc Id: ENSRNOP00000087762   ⟸   ENSRNOT00000104853
RefSeq Acc Id: ENSRNOP00000078396   ⟸   ENSRNOT00000115743
RefSeq Acc Id: XP_063142381   ⟸   XM_063286311
- Peptide Label: isoform X7
RefSeq Acc Id: XP_063142382   ⟸   XM_063286312
- Peptide Label: isoform X8
RefSeq Acc Id: XP_063142390   ⟸   XM_063286320
- Peptide Label: isoform X16
RefSeq Acc Id: XP_063142378   ⟸   XM_063286308
- Peptide Label: isoform X4
RefSeq Acc Id: XP_063142387   ⟸   XM_063286317
- Peptide Label: isoform X13
RefSeq Acc Id: XP_063142383   ⟸   XM_063286313
- Peptide Label: isoform X9
RefSeq Acc Id: XP_063142388   ⟸   XM_063286318
- Peptide Label: isoform X14
RefSeq Acc Id: XP_063142377   ⟸   XM_063286307
- Peptide Label: isoform X1
RefSeq Acc Id: XP_063142384   ⟸   XM_063286314
- Peptide Label: isoform X10
RefSeq Acc Id: XP_063142385   ⟸   XM_063286315
- Peptide Label: isoform X11
RefSeq Acc Id: XP_063142380   ⟸   XM_063286310
- Peptide Label: isoform X6
RefSeq Acc Id: XP_063142379   ⟸   XM_063286309
- Peptide Label: isoform X5
RefSeq Acc Id: XP_063142389   ⟸   XM_063286319
- Peptide Label: isoform X15
RefSeq Acc Id: XP_063142386   ⟸   XM_063286316
- Peptide Label: isoform X12
Protein Domains
C2H2-type

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-B0BNH4-F1-model_v2 AlphaFold B0BNH4 1-272 view protein structure

Transcriptome

eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen

Promoters
RGD ID:13693340
Promoter ID:EPDNEW_R3864
Type:initiation region
Name:Zfp637_1
Description:zinc finger protein 637
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Rat AssemblyChrPosition (strand)Source
Rnor_6.04149,877,877 - 149,877,937EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene RGD:1559850 AgrOrtholog
BioCyc Gene G2FUF-43254 BioCyc
Ensembl Genes ENSRNOG00000023065 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSRNOT00000038521.5 UniProtKB/TrEMBL
  ENSRNOT00000104853.1 UniProtKB/TrEMBL
  ENSRNOT00000105993.1 UniProtKB/TrEMBL
  ENSRNOT00000115743.1 UniProtKB/TrEMBL
Gene3D-CATH Classic Zinc Finger UniProtKB/TrEMBL
IMAGE_CLONE IMAGE:7376045 IMAGE-MGC_LOAD
InterPro Znf_C2H2/integrase_DNA-bd UniProtKB/TrEMBL
  Znf_C2H2_sf UniProtKB/TrEMBL
KEGG Report rno:362425 UniProtKB/TrEMBL
MGC_CLONE MGC:188263 IMAGE-MGC_LOAD
NCBI Gene 362425 ENTREZGENE
PANTHER SI:CH73-221F6.4-RELATED UniProtKB/TrEMBL
  ZINC FINGER AND BTB DOMAIN-CONTAINING PROTEIN 17 UniProtKB/TrEMBL
  ZINC FINGER AND SCAN DOMAIN-CONTAINING UniProtKB/TrEMBL
  ZINC FINGER PROTEIN UniProtKB/TrEMBL
  ZINC FINGER PROTEIN UniProtKB/TrEMBL
  ZINC FINGER PROTEIN 142 UniProtKB/TrEMBL
  ZINC FINGER PROTEIN 234 UniProtKB/TrEMBL
  ZINC FINGER PROTEIN 791 UniProtKB/TrEMBL
Pfam zf-C2H2 UniProtKB/TrEMBL
  zf-C2H2_6 UniProtKB/TrEMBL
  zf-H2C2_2 UniProtKB/TrEMBL
PhenoGen Zfp637 PhenoGen
PROSITE ZINC_FINGER_C2H2_1 UniProtKB/TrEMBL
  ZINC_FINGER_C2H2_2 UniProtKB/TrEMBL
RatGTEx ENSRNOG00000023065 RatGTEx
SMART ZnF_C2H2 UniProtKB/TrEMBL
Superfamily-SCOP SSF57667 UniProtKB/TrEMBL
UniProt A0A8I6A6H3_RAT UniProtKB/TrEMBL
  A0A8I6AKD8_RAT UniProtKB/TrEMBL
  B0BNH4 ENTREZGENE, UniProtKB/TrEMBL
  F7F4M5_RAT UniProtKB/TrEMBL


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2006-03-30 Zfp637  zinc finger protein 637  AZF1  zinc finger protein 1  Symbol and Name updated 1299863 APPROVED
2006-02-09 AZF1  zinc finger protein 1      Symbol and Name status set to provisional 70820 PROVISIONAL