Septin11 (septin 11) - Rat Genome Database

Send us a Message



Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Gene: Septin11 (septin 11) Mus musculus
Analyze
Symbol: Septin11
Name: septin 11
RGD ID: 1558541
MGI Page MGI
Description: Predicted to enable GTPase activity and molecular adaptor activity. Predicted to be involved in cytoskeleton-dependent cytokinesis and regulation of synapse organization. Predicted to act upstream of or within cell division. Part of septin complex. Is expressed in brain; inner ear; and testis. Orthologous to human SEPTIN11 (septin 11).
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: 6230410I01Rik; AW548875; D5Ertd606; D5Ertd606e; Sept; Sept11; septin-11
RGD Orthologs
Human
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39593,227,445 - 93,329,237 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl593,241,296 - 93,324,306 (+)EnsemblGRCm39 Ensembl
GRCm38593,090,995 - 93,182,368 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl593,093,437 - 93,176,447 (+)EnsemblGRCm38mm10GRCm38
MGSCv37593,522,483 - 93,603,984 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36594,168,661 - 94,250,162 (+)NCBIMGSCv36mm8
Celera591,247,357 - 91,328,543 (+)NCBICelera
Cytogenetic Map5E2NCBI
cM Map547.29NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
(+)-schisandrin B  (ISO)
17beta-estradiol  (EXP,ISO)
2,3,7,8-tetrachlorodibenzodioxine  (EXP,ISO)
2,4-dibromophenyl 2,4,5-tribromophenyl ether  (ISO)
3-chloropropane-1,2-diol  (ISO)
4-(ethoxymethylene)-2-phenyloxazol-5-one  (ISO)
acetamide  (ISO)
aconitine  (ISO)
aflatoxin B1  (EXP,ISO)
all-trans-retinoic acid  (ISO)
antirheumatic drug  (ISO)
aristolochic acid A  (ISO)
arsane  (ISO)
arsenic atom  (ISO)
arsenous acid  (ISO)
Benoxacor  (EXP)
benzo[a]pyrene  (EXP,ISO)
benzo[b]fluoranthene  (EXP)
bis(2-ethylhexyl) phthalate  (ISO)
bisphenol A  (ISO)
Bisphenol B  (ISO)
bucladesine  (ISO)
carbon nanotube  (EXP)
CGP 52608  (ISO)
chrysene  (EXP)
cobalt dichloride  (ISO)
copper atom  (ISO)
copper(0)  (ISO)
cyclosporin A  (ISO)
diarsenic trioxide  (ISO)
dibutyl phthalate  (ISO)
dorsomorphin  (ISO)
doxorubicin  (ISO)
endosulfan  (ISO)
enzyme inhibitor  (ISO)
eugenol  (ISO)
gentamycin  (ISO)
glafenine  (ISO)
hyaluronic acid  (ISO)
hydrogen peroxide  (ISO)
isotretinoin  (ISO)
ivermectin  (ISO)
mancozeb  (ISO)
medroxyprogesterone acetate  (ISO)
Mesaconitine  (ISO)
methyl methanesulfonate  (ISO)
methylmercury chloride  (ISO)
microcystin RR  (ISO)
microcystin-LR  (ISO)
nickel sulfate  (ISO)
paracetamol  (EXP,ISO)
phenylmercury acetate  (ISO)
pregnenolone 16alpha-carbonitrile  (EXP)
resveratrol  (EXP)
SB 431542  (ISO)
sodium arsenite  (ISO)
sunitinib  (ISO)
tamibarotene  (ISO)
testosterone  (EXP)
tetrachloromethane  (ISO)
tetrahydropalmatine  (ISO)
tetraphene  (EXP)
thapsigargin  (ISO)
thioacetamide  (ISO)
torcetrapib  (ISO)
trichloroethene  (ISO)
triptonide  (EXP)
troglitazone  (EXP)
valproic acid  (EXP)
vinclozolin  (ISO)
zinc sulfate  (ISO)

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Function

References

References - curated
# Reference Title Reference Citation
1. Functional annotation of a full-length mouse cDNA collection. Kawai J, etal., Nature. 2001 Feb 8;409(6821):685-90.
2. Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse development. Ko MS, etal., Development 2000 Apr;127(8):1737-49.
3. MGDs mouse GO annotations MGD data from the GO Consortium
4. Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Okazaki Y, etal., Nature. 2002 Dec 5;420(6915):563-73.
5. Identification and analysis of genes from the mouse otic vesicle and their association with developmental subprocesses through in situ hybridization. Powles N, etal., Dev Biol 2004 Apr 1;268(1):24-38.
6. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:7671812   PMID:8889548   PMID:10349636   PMID:10922068   PMID:11042159   PMID:11076861   PMID:11544199   PMID:12477932   PMID:12520002   PMID:12904583   PMID:14610273   PMID:15489334  
PMID:15782199   PMID:16141072   PMID:16141073   PMID:16420439   PMID:16512683   PMID:16602821   PMID:18799693   PMID:18809578   PMID:20181826   PMID:21824005   PMID:21873635   PMID:22575789  
PMID:22794259   PMID:24113571   PMID:26410627   PMID:26496610   PMID:26792178   PMID:27507650   PMID:28671696   PMID:29191246   PMID:30333137   PMID:30409884   PMID:30562941   PMID:32325033  
PMID:32581705   PMID:34321999   PMID:34799629   PMID:35200715   PMID:35700329   PMID:36293380   PMID:36417873   PMID:38187761  


Genomics

Comparative Map Data
Septin11
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39593,227,445 - 93,329,237 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl593,241,296 - 93,324,306 (+)EnsemblGRCm39 Ensembl
GRCm38593,090,995 - 93,182,368 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl593,093,437 - 93,176,447 (+)EnsemblGRCm38mm10GRCm38
MGSCv37593,522,483 - 93,603,984 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36594,168,661 - 94,250,162 (+)NCBIMGSCv36mm8
Celera591,247,357 - 91,328,543 (+)NCBICelera
Cytogenetic Map5E2NCBI
cM Map547.29NCBI
SEPTIN11
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38476,949,752 - 77,040,154 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl476,949,751 - 77,040,384 (+)EnsemblGRCh38hg38GRCh38
GRCh37477,870,905 - 77,959,768 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 36478,089,919 - 78,178,792 (+)NCBINCBI36Build 36hg18NCBI36
Build 34478,228,073 - 78,316,946NCBI
Celera475,172,269 - 75,261,155 (+)NCBICelera
Cytogenetic Map4q21.1NCBI
HuRef473,622,723 - 73,711,589 (+)NCBIHuRef
CHM1_1477,848,139 - 77,937,022 (+)NCBICHM1_1
T2T-CHM13v2.0480,290,475 - 80,380,967 (+)NCBIT2T-CHM13v2.0
Septin11
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81415,119,760 - 15,275,222 (-)NCBIGRCr8
mRatBN7.21414,844,759 - 14,990,856 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1414,844,580 - 14,990,853 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1414,916,495 - 14,999,685 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01416,235,511 - 16,318,706 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01414,930,766 - 15,013,947 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01416,369,544 - 16,405,645 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1416,369,544 - 16,452,998 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01416,295,536 - 16,331,637 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41416,465,348 - 16,501,284 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11416,464,587 - 16,550,314 (-)NCBI
Celera1414,310,209 - 14,346,008 (-)NCBICelera
Cytogenetic Map14p22NCBI
Septin11
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554331,606,261 - 1,691,812 (+)EnsemblChiLan1.0
ChiLan1.0NW_0049554331,606,246 - 1,691,819 (+)NCBIChiLan1.0ChiLan1.0
SEPTIN11
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2353,012,259 - 53,133,197 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1453,107,370 - 53,313,062 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0447,165,381 - 47,255,954 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.1453,004,755 - 53,095,427 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl453,006,294 - 53,095,844 (-)Ensemblpanpan1.1panPan2
SEPTIN11
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1321,553,208 - 1,608,132 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl321,475,748 - 1,607,107 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha3240,276,043 - 40,371,637 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0321,538,003 - 1,640,039 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl321,539,127 - 1,640,050 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1321,536,272 - 1,629,688 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0321,492,069 - 1,585,224 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.03238,587,743 - 38,684,577 (-)NCBIUU_Cfam_GSD_1.0
Septin11
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440528510,562,850 - 10,699,922 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_004936676852,059 - 941,387 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_004936676852,115 - 944,387 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
SEPTIN11
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl872,543,621 - 72,679,171 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1872,543,641 - 72,679,173 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2876,788,927 - 76,879,982 (+)NCBISscrofa10.2Sscrofa10.2susScr3
SEPTIN11
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1725,449,480 - 25,541,029 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl725,448,672 - 25,535,055 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_0236660373,797,467 - 3,894,729 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Septin11
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462475713,935,081 - 14,039,777 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462475713,932,153 - 14,039,741 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in Septin11
3123 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:1316
Count of miRNA genes:647
Interacting mature miRNAs:794
Transcripts:ENSMUST00000074733
Prediction methods:Miranda, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
11341716Rvfs3_mRift Valley fever susceptibility 3 (mouse)526441234138455402Mouse
4140990Lgq6_mlate growth QTL 6 (mouse)Not determined32133234100777931Mouse
4141219W10q16_mweight 10 weeks QTL 16 (mouse)Not determined32133234100777931Mouse
1301524Lmb2_mlupus in MRL and B6 F2 cross (mouse)Not determined537581488112465722Mouse
11041665Lmr24_mleishmaniasis resistance 24 (mouse)552694462107321041Mouse
11041899Lmr24a_mleishmaniasis resistance 24a (mouse)552694462107321041Mouse
4142064Tmc1m4_mTmc1 modifier 4 (mouse)Not determined554500177127001072Mouse
1301243Bmd2_mbone mineral density 2 (mouse)Not determined555388334100455525Mouse
4142317Rgcs1_mretinal ganglion cell susceptible 1 (mouse)Not determined55388334108762627Mouse
11040591Lmr3c_mleishmaniasis resistance 3c (mouse)55960280193602980Mouse
11040592Lmr3d_mleishmaniasis resistance 3d (mouse)55960280193602980Mouse
11040589Lmr3a_mleishmaniasis resistance 3a (mouse)55960280193602980Mouse
11040590Lmr3b_mleishmaniasis resistance 3b (mouse)55960280193602980Mouse
1301843Listr1_mlisteriosis resistance 1 (mouse)Not determined56024608194246203Mouse
13464247Ahl14_mage related hearing loss, early onset 14 (mouse)56040306294403160Mouse
11252124Modvl6_mmodifier of vacuolated lens 6 (mouse)56265056896650688Mouse
4142428Modvl1_mmodifier of vacuolated lens 1 (mouse)Not determined6265056896650688Mouse
1301010ahl2_mage related hearing loss 2 (mouse)Not determined56265056896650688Mouse
13464250Ahl15_mage related hearing loss, early onset 15 (mouse)56265056896650688Mouse
10045972Tir5_mtrypanosome infection response 5 (mouse)Not determined563705442104387065Mouse
11049560Lmr24d_mleishmaniasis resistance 24d (mouse)56437487798374996Mouse
12904739M2fscn2_mmodifier 2 of FSCN2 (mouse)566529661100529661Mouse
12904740M1fscn2_mmodifier 1 of Fscn2 (mouse)566529661100529661Mouse
26884395Humsd2_mhumerus midshaft diameter 2, 10 week (mouse)570057343132528839Mouse
10043993Hbnr10_mHeligmosomoides bakeri nematode resistance 10 (mouse)Not determined572418876106419011Mouse
27226719Tibw6_mtibia width 6, proximal, 16 week (mouse)572857343139985755Mouse
25314315Mlh1fc4_mMLH1 foci count 4 (mouse)574460661132528839Mouse
13506928Recrq8_mrecombination rate in male meiosis QTL 8 (mouse)574460661132528839Mouse
4141124Dshv2_mdorsal hippocampal volume 2 (mouse)Not determined57531534898019803Mouse
1357431Cia27_mcollagen induced arthritis 27 (mouse)Not determined575315348120018629Mouse
4141438Skmw13_mskeletal muscle weight 13 (mouse)Not determined576190263110190479Mouse
4141505Chlq14_mcirculating hormone level QTL 14 (mouse)Not determined576280786110280917Mouse
1300986Hdlq2_mHDL QTL 2 (mouse)Not determined576280786110280917Mouse
1301691Cdcs10_mcytokine deficiency colitis susceptibility 10 (mouse)Not determined576280786110280917Mouse
1301829Thyls2_mthymic lymphoma susceptibility 2 (mouse)Not determined576445064110445225Mouse
1301713Dbsty2_mdiabesity 2 (mouse)Not determined576445064110445225Mouse
13464249Ahl16_mage related hearing loss, early onset 16 (mouse)576445064110445225Mouse
1300931Cocrb6_mcocaine related behavior 6 (mouse)Not determined576445064110445225Mouse
12910784Pwgrq15_mpost-weaning growth rate QTL 15 (mouse)57717582397658215Mouse
12910816Ogrq2_moverall growth rate QTL 2 (mouse)57717582397658215Mouse
10401246Bglu13_mblood glucose level 13 (mouse)Not determined579539640113539786Mouse
10755524Mono1_mmonocyte differential 1 (mouse)580849259114849259Mouse
1301419Cypr3_mcytokine production 3 (mouse)Not determined581019649115019803Mouse
10401245Bglu18_mblood glucose level 18 (mouse)Not determined582838468116838597Mouse
13464242Ahl17_mage related hearing loss, early onset 17 (mouse)582838468116838597Mouse
10043958Chldq12_mcholesterol and HDL QTL 12 (mouse)Not determined587386871121387065Mouse
1301126Bwem1_mbody weight day 30 males 1 (mouse)Not determined587386871121387065Mouse
13464241Ahl18_mage related hearing loss, early onset 18 (mouse)587386871121387065Mouse
1300801Drb2_mdopamine receptor binding 2 (mouse)Not determined587386871121387065Mouse
1301399Cpfd3_mcerebellum pattern fissures (mouse)Not determined587386871121387065Mouse
1357725Eae39_mexperimental allergic encephalomyelitis 39 (mouse)Not determined589418876118864028Mouse
1300968Skts4_mskin tumor susceptibility 4 (mouse)Not determined589418876124238239Mouse
1301362Prnr1_mprion resistance 1 (mouse)Not determined589418876146787935Mouse
11049562Lmr24f_mleishmaniasis resistance 24f (mouse)590320962124321041Mouse
1301457Cfsw2_mcystic fibrosis survival to weaning 2 (mouse)Not determined590561006124561151Mouse
1300993Hycdc_mhypercapnic duty cycle (mouse)Not determined590561006124561151Mouse
9587780Afw16_mabdominal fat weight QTL 16 (mouse)Not determined592830166126830285Mouse

Markers in Region
AW548875  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38593,174,364 - 93,174,467UniSTSGRCm38
MGSCv37593,603,390 - 93,603,493UniSTSGRCm37
Celera591,327,949 - 91,328,052UniSTS
Cytogenetic Map5E2UniSTS
cM Map552.0UniSTS
Whitehead/MRC_RH51106.95UniSTS
D5Mit205  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38593,132,927 - 93,133,058UniSTSGRCm38
MGSCv37593,561,953 - 93,562,084UniSTSGRCm37
Celera591,286,709 - 91,286,840UniSTS
Cytogenetic Map5E2UniSTS
cM Map545.0UniSTS
Whitehead Genetic532.8UniSTS
Whitehead_YAC5 UniSTS
UniSTS:235223  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38593,173,430 - 93,173,604UniSTSGRCm38
MGSCv37593,602,456 - 93,602,630UniSTSGRCm37
Celera591,327,015 - 91,327,189UniSTS
Cytogenetic Map5E2UniSTS
cM Map552.0UniSTS
UniSTS:235224  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38593,173,810 - 93,173,896UniSTSGRCm38
MGSCv37593,602,836 - 93,602,922UniSTSGRCm37
Celera591,327,395 - 91,327,481UniSTS
Cytogenetic Map5E2UniSTS
cM Map552.0UniSTS
D5Ertd606e  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38593,174,637 - 93,174,837UniSTSGRCm38
MGSCv37593,603,663 - 93,603,863UniSTSGRCm37
Celera591,328,222 - 91,328,422UniSTS
Cytogenetic Map5E2UniSTS
cM Map552.0UniSTS
RH136848  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38593,174,671 - 93,174,875UniSTSGRCm38
MGSCv37593,603,697 - 93,603,901UniSTSGRCm37
Celera591,328,256 - 91,328,460UniSTS
Cytogenetic Map5E2UniSTS
cM Map552.0UniSTS


Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts NM_001009818 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001310669 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001310671 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001347377 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006535098 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006535099 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006535100 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006535101 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006535103 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006535104 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006535106 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006535108 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_011249531 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_011249532 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017320978 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017320980 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017320981 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017320982 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_030254690 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_030254691 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036165288 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036165289 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036165291 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036165292 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_001784719 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_389284 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AC125233 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AC134827 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK018083 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK020155 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK028475 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK031522 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK033173 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK043049 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK075989 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK136063 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK136162 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK147983 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK160319 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK166517 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK170945 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK171368 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK188648 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK195200 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK204653 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK204846 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC031456 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC064466 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH466617 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CO042161 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

RefSeq Acc Id: ENSMUST00000074733   ⟹   ENSMUSP00000074293
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl593,241,296 - 93,322,817 (+)Ensembl
GRCm38.p6 Ensembl593,093,437 - 93,174,958 (+)Ensembl
RefSeq Acc Id: ENSMUST00000201377
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl593,241,297 - 93,241,936 (+)Ensembl
GRCm38.p6 Ensembl593,093,438 - 93,094,077 (+)Ensembl
RefSeq Acc Id: ENSMUST00000201421   ⟹   ENSMUSP00000143928
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl593,241,385 - 93,324,306 (+)Ensembl
GRCm38.p6 Ensembl593,093,526 - 93,176,447 (+)Ensembl
RefSeq Acc Id: ENSMUST00000201695
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl593,296,362 - 93,305,561 (+)Ensembl
GRCm38.p6 Ensembl593,148,503 - 93,157,702 (+)Ensembl
RefSeq Acc Id: ENSMUST00000201700   ⟹   ENSMUSP00000143901
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl593,241,297 - 93,317,617 (+)Ensembl
GRCm38.p6 Ensembl593,093,438 - 93,169,758 (+)Ensembl
RefSeq Acc Id: ENSMUST00000202196   ⟹   ENSMUSP00000144573
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl593,241,307 - 93,309,105 (+)Ensembl
GRCm38.p6 Ensembl593,093,448 - 93,161,246 (+)Ensembl
RefSeq Acc Id: ENSMUST00000202217   ⟹   ENSMUSP00000144235
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl593,241,430 - 93,323,936 (+)Ensembl
GRCm38.p6 Ensembl593,093,571 - 93,176,077 (+)Ensembl
RefSeq Acc Id: ENSMUST00000202308   ⟹   ENSMUSP00000144136
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl593,241,310 - 93,324,296 (+)Ensembl
GRCm38.p6 Ensembl593,093,451 - 93,176,437 (+)Ensembl
RefSeq Acc Id: ENSMUST00000202415   ⟹   ENSMUSP00000144360
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl593,241,395 - 93,296,402 (+)Ensembl
GRCm38.p6 Ensembl593,093,536 - 93,148,543 (+)Ensembl
RefSeq Acc Id: NM_001009818   ⟹   NP_001009818
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39593,241,275 - 93,322,934 (+)NCBI
GRCm38593,093,416 - 93,175,075 (+)NCBI
MGSCv37593,522,483 - 93,603,984 (+)RGD
Celera591,247,357 - 91,328,543 (+)RGD
cM Map5 ENTREZGENE
Sequence:
RefSeq Acc Id: NM_001310669   ⟹   NP_001297598
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39593,241,275 - 93,329,237 (+)NCBI
GRCm38593,093,416 - 93,181,378 (+)NCBI
Sequence:
RefSeq Acc Id: NM_001310671   ⟹   NP_001297600
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39593,241,275 - 93,329,237 (+)NCBI
GRCm38593,093,416 - 93,181,378 (+)NCBI
Sequence:
RefSeq Acc Id: NM_001347377   ⟹   NP_001334306
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39593,241,275 - 93,329,237 (+)NCBI
GRCm38593,093,416 - 93,181,378 (+)NCBI
Sequence:
RefSeq Acc Id: XM_006535098   ⟹   XP_006535161
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39593,238,061 - 93,324,321 (+)NCBI
GRCm38593,090,995 - 93,182,295 (+)NCBI
Sequence:
RefSeq Acc Id: XM_006535099   ⟹   XP_006535162
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39593,238,061 - 93,324,321 (+)NCBI
GRCm38593,090,995 - 93,182,368 (+)NCBI
Sequence:
RefSeq Acc Id: XM_006535100   ⟹   XP_006535163
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39593,238,061 - 93,324,321 (+)NCBI
GRCm38593,090,995 - 93,182,295 (+)NCBI
Sequence:
RefSeq Acc Id: XM_006535101   ⟹   XP_006535164
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39593,238,061 - 93,324,321 (+)NCBI
GRCm38593,090,995 - 93,182,368 (+)NCBI
Sequence:
RefSeq Acc Id: XM_006535103   ⟹   XP_006535166
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39593,238,061 - 93,324,321 (+)NCBI
GRCm38593,090,995 - 93,182,295 (+)NCBI
Sequence:
RefSeq Acc Id: XM_006535104   ⟹   XP_006535167
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39593,241,263 - 93,322,915 (+)NCBI
GRCm38593,093,416 - 93,175,056 (+)NCBI
Sequence:
RefSeq Acc Id: XM_006535106   ⟹   XP_006535169
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39593,241,275 - 93,322,817 (+)NCBI
GRCm38593,093,535 - 93,174,958 (+)NCBI
Sequence:
RefSeq Acc Id: XM_006535108   ⟹   XP_006535171
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39593,241,275 - 93,322,817 (+)NCBI
GRCm38593,093,416 - 93,174,958 (+)NCBI
Sequence:
RefSeq Acc Id: XM_011249531   ⟹   XP_011247833
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39593,238,061 - 93,322,817 (+)NCBI
GRCm38593,090,995 - 93,174,958 (+)NCBI
Sequence:
RefSeq Acc Id: XM_011249532   ⟹   XP_011247834
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39593,238,849 - 93,322,817 (+)NCBI
GRCm38593,090,995 - 93,174,958 (+)NCBI
Sequence:
RefSeq Acc Id: XM_017320978   ⟹   XP_017176467
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39593,238,849 - 93,324,321 (+)NCBI
GRCm38593,090,995 - 93,182,295 (+)NCBI
Sequence:
RefSeq Acc Id: XM_017320980   ⟹   XP_017176469
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39593,241,263 - 93,324,321 (+)NCBI
GRCm38593,093,416 - 93,182,368 (+)NCBI
Sequence:
RefSeq Acc Id: XM_017320981   ⟹   XP_017176470
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39593,241,263 - 93,324,321 (+)NCBI
GRCm38593,093,416 - 93,182,295 (+)NCBI
Sequence:
RefSeq Acc Id: XM_017320982   ⟹   XP_017176471
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39593,240,792 - 93,322,817 (+)NCBI
GRCm38593,092,933 - 93,174,958 (+)NCBI
Sequence:
RefSeq Acc Id: XM_030254690   ⟹   XP_030110550
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39593,241,263 - 93,324,321 (+)NCBI
GRCm38593,093,416 - 93,182,368 (+)NCBI
Sequence:
RefSeq Acc Id: XM_030254691   ⟹   XP_030110551
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39593,241,348 - 93,322,817 (+)NCBI
GRCm38593,093,489 - 93,174,958 (+)NCBI
Sequence:
RefSeq Acc Id: XM_036165288   ⟹   XP_036021181
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39593,227,445 - 93,322,817 (+)NCBI
Sequence:
RefSeq Acc Id: XM_036165289   ⟹   XP_036021182
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39593,227,482 - 93,322,817 (+)NCBI
Sequence:
RefSeq Acc Id: XM_036165291   ⟹   XP_036021184
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39593,241,263 - 93,322,817 (+)NCBI
Sequence:
RefSeq Acc Id: XM_036165292   ⟹   XP_036021185
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39593,285,211 - 93,322,817 (+)NCBI
Sequence:
RefSeq Acc Id: XR_001784719
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39593,238,061 - 93,324,307 (+)NCBI
GRCm38593,090,995 - 93,181,736 (+)NCBI
Sequence:
RefSeq Acc Id: XR_389284
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39593,238,061 - 93,324,321 (+)NCBI
GRCm38593,090,995 - 93,182,295 (+)NCBI
Sequence:
Protein Sequences
Protein RefSeqs NP_001009818 (Get FASTA)   NCBI Sequence Viewer  
  NP_001297598 (Get FASTA)   NCBI Sequence Viewer  
  NP_001297600 (Get FASTA)   NCBI Sequence Viewer  
  NP_001334306 (Get FASTA)   NCBI Sequence Viewer  
  XP_006535161 (Get FASTA)   NCBI Sequence Viewer  
  XP_006535162 (Get FASTA)   NCBI Sequence Viewer  
  XP_006535163 (Get FASTA)   NCBI Sequence Viewer  
  XP_006535164 (Get FASTA)   NCBI Sequence Viewer  
  XP_006535166 (Get FASTA)   NCBI Sequence Viewer  
  XP_006535167 (Get FASTA)   NCBI Sequence Viewer  
  XP_006535169 (Get FASTA)   NCBI Sequence Viewer  
  XP_006535171 (Get FASTA)   NCBI Sequence Viewer  
  XP_011247833 (Get FASTA)   NCBI Sequence Viewer  
  XP_011247834 (Get FASTA)   NCBI Sequence Viewer  
  XP_017176467 (Get FASTA)   NCBI Sequence Viewer  
  XP_017176469 (Get FASTA)   NCBI Sequence Viewer  
  XP_017176470 (Get FASTA)   NCBI Sequence Viewer  
  XP_017176471 (Get FASTA)   NCBI Sequence Viewer  
  XP_030110550 (Get FASTA)   NCBI Sequence Viewer  
  XP_030110551 (Get FASTA)   NCBI Sequence Viewer  
  XP_036021181 (Get FASTA)   NCBI Sequence Viewer  
  XP_036021182 (Get FASTA)   NCBI Sequence Viewer  
  XP_036021184 (Get FASTA)   NCBI Sequence Viewer  
  XP_036021185 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein AAH31456 (Get FASTA)   NCBI Sequence Viewer  
  AAH64466 (Get FASTA)   NCBI Sequence Viewer  
  BAC25969 (Get FASTA)   NCBI Sequence Viewer  
  BAE38822 (Get FASTA)   NCBI Sequence Viewer  
  BAE42133 (Get FASTA)   NCBI Sequence Viewer  
  BAE42414 (Get FASTA)   NCBI Sequence Viewer  
  EDL05233 (Get FASTA)   NCBI Sequence Viewer  
  EDL05234 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSMUSP00000074293
  ENSMUSP00000074293.8
  ENSMUSP00000143901
  ENSMUSP00000143901.2
  ENSMUSP00000143928
  ENSMUSP00000143928.2
  ENSMUSP00000144136
  ENSMUSP00000144136.2
  ENSMUSP00000144235
  ENSMUSP00000144235.2
  ENSMUSP00000144360.2
  ENSMUSP00000144573.2
GenBank Protein Q8C1B7 (Get FASTA)   NCBI Sequence Viewer  
RefSeq Acc Id: NP_001009818   ⟸   NM_001009818
- Peptide Label: isoform 3
- UniProtKB: A0A0J9YTY0 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006535162   ⟸   XM_006535099
- Peptide Label: isoform X1
- UniProtKB: A0A0J9YTY0 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006535164   ⟸   XM_006535101
- Peptide Label: isoform X2
- UniProtKB: A0A0J9YTY0 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006535161   ⟸   XM_006535098
- Peptide Label: isoform X1
- UniProtKB: A0A0J9YTY0 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006535163   ⟸   XM_006535100
- Peptide Label: isoform X2
- UniProtKB: A0A0J9YTY0 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006535166   ⟸   XM_006535103
- Peptide Label: isoform X5
- UniProtKB: A0A0J9YTY0 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006535171   ⟸   XM_006535108
- Peptide Label: isoform X10
- UniProtKB: A0A0J9YTY0 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006535169   ⟸   XM_006535106
- Peptide Label: isoform X8
- UniProtKB: A0A0J9YTY0 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006535167   ⟸   XM_006535104
- Peptide Label: isoform X6
- UniProtKB: A0A0J9YUL3 (UniProtKB/TrEMBL),   A0A0J9YTY0 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_011247833   ⟸   XM_011249531
- Peptide Label: isoform X2
- UniProtKB: A0A0J9YTY0 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_011247834   ⟸   XM_011249532
- Peptide Label: isoform X3
- UniProtKB: A0A0J9YTY0 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_017176467   ⟸   XM_017320978
- Peptide Label: isoform X4
- UniProtKB: A0A0J9YTY0 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_017176471   ⟸   XM_017320982
- Peptide Label: isoform X10
- UniProtKB: A0A0J9YTY0 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001297598   ⟸   NM_001310669
- Peptide Label: isoform 1
- UniProtKB: Q6P2K5 (UniProtKB/Swiss-Prot),   Q5D0F0 (UniProtKB/Swiss-Prot),   Q3TC24 (UniProtKB/Swiss-Prot),   Q3TBA0 (UniProtKB/Swiss-Prot),   Q6P6I0 (UniProtKB/Swiss-Prot),   Q8C1B7 (UniProtKB/Swiss-Prot),   A0A0J9YTY0 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001297600   ⟸   NM_001310671
- Peptide Label: isoform 2
- UniProtKB: A0A0J9YTY0 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_017176470   ⟸   XM_017320981
- Peptide Label: isoform X9
- UniProtKB: A0A0J9YTY0 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_017176469   ⟸   XM_017320980
- Peptide Label: isoform X6
- UniProtKB: A0A0J9YUL3 (UniProtKB/TrEMBL),   A0A0J9YTY0 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_030110550   ⟸   XM_030254690
- Peptide Label: isoform X7
- UniProtKB: Q8C1B7 (UniProtKB/Swiss-Prot),   Q6P2K5 (UniProtKB/Swiss-Prot),   Q5D0F0 (UniProtKB/Swiss-Prot),   Q3TC24 (UniProtKB/Swiss-Prot),   Q3TBA0 (UniProtKB/Swiss-Prot),   Q6P6I0 (UniProtKB/Swiss-Prot),   A0A0J9YTY0 (UniProtKB/TrEMBL)
RefSeq Acc Id: NP_001334306   ⟸   NM_001347377
- Peptide Label: isoform 4
- UniProtKB: A0A0J9YUL3 (UniProtKB/TrEMBL),   A0A0J9YTY0 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_030110551   ⟸   XM_030254691
- Peptide Label: isoform X11
- UniProtKB: A0A0J9YTY0 (UniProtKB/TrEMBL)
RefSeq Acc Id: ENSMUSP00000144360   ⟸   ENSMUST00000202415
RefSeq Acc Id: ENSMUSP00000144235   ⟸   ENSMUST00000202217
RefSeq Acc Id: ENSMUSP00000144136   ⟸   ENSMUST00000202308
RefSeq Acc Id: ENSMUSP00000144573   ⟸   ENSMUST00000202196
RefSeq Acc Id: ENSMUSP00000074293   ⟸   ENSMUST00000074733
RefSeq Acc Id: ENSMUSP00000143928   ⟸   ENSMUST00000201421
RefSeq Acc Id: ENSMUSP00000143901   ⟸   ENSMUST00000201700
RefSeq Acc Id: XP_036021181   ⟸   XM_036165288
- Peptide Label: isoform X1
- UniProtKB: A0A0J9YTY0 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_036021182   ⟸   XM_036165289
- Peptide Label: isoform X1
- UniProtKB: A0A0J9YTY0 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_036021184   ⟸   XM_036165291
- Peptide Label: isoform X7
- UniProtKB: Q8C1B7 (UniProtKB/Swiss-Prot),   Q6P2K5 (UniProtKB/Swiss-Prot),   Q5D0F0 (UniProtKB/Swiss-Prot),   Q3TC24 (UniProtKB/Swiss-Prot),   Q3TBA0 (UniProtKB/Swiss-Prot),   Q6P6I0 (UniProtKB/Swiss-Prot),   A0A0J9YTY0 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_036021185   ⟸   XM_036165292
- Peptide Label: isoform X11
- UniProtKB: A0A0J9YTY0 (UniProtKB/TrEMBL)
Protein Domains
Septin-type G

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-Q8C1B7-F1-model_v2 AlphaFold Q8C1B7 1-431 view protein structure

Promoters
RGD ID:6887202
Promoter ID:EPDNEW_M7052
Type:initiation region
Name:Sept11_1
Description:Mus musculus septin 11 , transcript variant 1, mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38593,093,437 - 93,093,497EPDNEW
RGD ID:6838310
Promoter ID:MM_KWN:42916
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:3T3L1_Day0,   3T3L1_Day1,   3T3L1_Day2,   3T3L1_Day3,   3T3L1_Day4,   BoneMarrow_0Hour,   BoneMarrow_2Hour,   BoneMarrow_4Hour,   Brain,   ES_Cell,   Kidney,   Liver,   Lung,   MEF_B4,   MEF_B6,   Spleen
Transcripts:ENSMUST00000074733,   NM_001009818,   UC008YDX.1,   UC008YDZ.1,   UC008YEA.1
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv36593,521,481 - 93,522,972 (+)MPROMDB
RGD ID:6838312
Promoter ID:MM_KWN:42917
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:Lung,   MEF_B6
Transcripts:ENSMUST00000086956,   ENSMUST00000113047
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv36593,566,964 - 93,567,464 (+)MPROMDB
RGD ID:6838313
Promoter ID:MM_KWN:42918
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:MEF_B6
Transcripts:UC008YEB.1
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv36593,576,581 - 93,577,532 (+)MPROMDB
RGD ID:6838315
Promoter ID:MM_KWN:42919
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:MEF_B6
Transcripts:UC008YEC.1
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv36593,595,731 - 93,596,582 (+)MPROMDB

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:1277214 AgrOrtholog
Ensembl Genes ENSMUSG00000058013 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Ensembl Transcript ENSMUST00000074733 ENTREZGENE
  ENSMUST00000074733.11 UniProtKB/Swiss-Prot
  ENSMUST00000201421 ENTREZGENE
  ENSMUST00000201421.4 UniProtKB/Swiss-Prot
  ENSMUST00000201700 ENTREZGENE
  ENSMUST00000201700.4 UniProtKB/TrEMBL
  ENSMUST00000202196.4 UniProtKB/TrEMBL
  ENSMUST00000202217 ENTREZGENE
  ENSMUST00000202217.3 UniProtKB/TrEMBL
  ENSMUST00000202308 ENTREZGENE
  ENSMUST00000202308.4 UniProtKB/Swiss-Prot
  ENSMUST00000202415.4 UniProtKB/TrEMBL
Gene3D-CATH 3.40.50.300 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
InterPro G_SEPTIN_dom UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  P-loop_NTPase UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Septin UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report mmu:52398 UniProtKB/Swiss-Prot
MGD MGI:1277214 ENTREZGENE
NCBI Gene 52398 ENTREZGENE
PANTHER SEPTIN UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  SEPTIN-11 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam Septin UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen Septin11 PhenoGen
PIRSF Septin UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PROSITE G_SEPTIN UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Superfamily-SCOP SSF52540 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt A0A0J9YTY0 ENTREZGENE, UniProtKB/TrEMBL
  A0A0J9YUL3 ENTREZGENE, UniProtKB/TrEMBL
  A0A0J9YUV6_MOUSE UniProtKB/TrEMBL
  A0A0J9YVA6_MOUSE UniProtKB/TrEMBL
  Q3TBA0 ENTREZGENE
  Q3TC24 ENTREZGENE
  Q5D0F0 ENTREZGENE
  Q6P2K5 ENTREZGENE
  Q6P6I0 ENTREZGENE
  Q8C1B7 ENTREZGENE, UniProtKB/Swiss-Prot
UniProt Secondary Q3TBA0 UniProtKB/Swiss-Prot
  Q3TC24 UniProtKB/Swiss-Prot
  Q5D0F0 UniProtKB/Swiss-Prot
  Q6P2K5 UniProtKB/Swiss-Prot
  Q6P6I0 UniProtKB/Swiss-Prot


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2019-11-27 Septin11  septin 11  Sept11  septin 11  Symbol and/or name change 5135510 APPROVED