Map3k19 (mitogen-activated protein kinase kinase kinase 19) - Rat Genome Database

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Gene: Map3k19 (mitogen-activated protein kinase kinase kinase 19) Mus musculus
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Symbol: Map3k19
Name: mitogen-activated protein kinase kinase kinase 19
RGD ID: 1558511
MGI Page MGI
Description: Predicted to enable protein kinase activity. Predicted to be involved in signal transduction. Is expressed in brain and spinal cord ventricular layer. Orthologous to human MAP3K19 (mitogen-activated protein kinase kinase kinase 19).
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: SPS1/STE20-related protein kinase YSK4; Yeast Sps1/Ste20-related kinase 4; Ysk; Ysk4
RGD Orthologs
Human
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391127,741,217 - 127,782,763 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1127,742,528 - 127,782,768 (-)EnsemblGRCm39 Ensembl
GRCm381127,813,480 - 127,855,026 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1127,814,791 - 127,855,031 (-)EnsemblGRCm38mm10GRCm38
MGSCv371129,711,848 - 129,736,867 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361129,642,846 - 129,680,189 (-)NCBIMGSCv36mm8
Celera1130,456,718 - 130,481,749 (-)NCBICelera
Cytogenetic Map1E3NCBI
cM Map155.8NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

References

References - curated
# Reference Title Reference Citation
1. MGDs mouse GO annotations MGD data from the GO Consortium
2. Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Okazaki Y, etal., Nature. 2002 Dec 5;420(6915):563-73.
3. YSK1, a novel mammalian protein kinase structurally related to Ste20 and SPS1, but is not involved in the known MAPK pathways. Osada S, etal., Oncogene 1997 May 1;14(17):2047-57.
4. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
Additional References at PubMed
PMID:21267068   PMID:21873635   PMID:32325033  


Genomics

Comparative Map Data
Map3k19
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391127,741,217 - 127,782,763 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1127,742,528 - 127,782,768 (-)EnsemblGRCm39 Ensembl
GRCm381127,813,480 - 127,855,026 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1127,814,791 - 127,855,031 (-)EnsemblGRCm38mm10GRCm38
MGSCv371129,711,848 - 129,736,867 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361129,642,846 - 129,680,189 (-)NCBIMGSCv36mm8
Celera1130,456,718 - 130,481,749 (-)NCBICelera
Cytogenetic Map1E3NCBI
cM Map155.8NCBI
MAP3K19
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh382134,964,491 - 135,047,447 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl2134,964,485 - 135,047,468 (-)EnsemblGRCh38hg38GRCh38
GRCh372135,722,061 - 135,805,017 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 362135,438,743 - 135,498,718 (-)NCBINCBI36Build 36hg18NCBI36
Celera2129,435,196 - 129,495,171 (-)NCBICelera
Cytogenetic Map2q21.3NCBI
HuRef2127,713,966 - 127,773,940 (-)NCBIHuRef
CHM1_12135,727,140 - 135,787,128 (-)NCBICHM1_1
T2T-CHM13v2.02135,404,909 - 135,487,908 (-)NCBIT2T-CHM13v2.0
Map3k19
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81341,852,633 - 41,896,078 (-)NCBIGRCr8
mRatBN7.21339,300,150 - 39,343,502 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1339,300,163 - 39,343,767 (-)EnsemblmRatBN7.2 Ensembl
Rnor_6.01344,524,055 - 44,553,197 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1344,523,797 - 44,540,516 (-)NCBIRnor6.0rn6Rnor6.0
Rnor_5.01349,608,805 - 49,636,322 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41340,461,978 - 40,490,269 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
Celera1339,675,906 - 39,718,072 (-)NCBICelera
Cytogenetic Map13q13NCBI
Map3k19
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554402,474,241 - 2,533,177 (-)EnsemblChiLan1.0
ChiLan1.0NW_0049554402,473,939 - 2,533,171 (-)NCBIChiLan1.0ChiLan1.0
MAP3K19
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21339,879,254 - 39,967,928 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan12B39,894,521 - 39,980,519 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v02B24,810,581 - 24,896,288 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.12B139,040,441 - 139,100,334 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl2B139,040,449 - 139,100,334 (-)Ensemblpanpan1.1panPan2
MAP3K19
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11937,791,019 - 37,826,505 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl1937,791,861 - 37,845,208 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha1938,031,515 - 38,050,213 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.01939,236,831 - 39,255,523 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl1939,236,833 - 39,295,925 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.11937,879,273 - 37,897,970 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.01938,040,233 - 38,058,950 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.01939,275,412 - 39,294,120 (-)NCBIUU_Cfam_GSD_1.0
Map3k19
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024405303100,821,201 - 100,877,053 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_00493646940,746,063 - 40,796,026 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_00493646940,757,248 - 40,796,297 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
MAP3K19
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1516,911,115 - 16,973,980 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11516,911,117 - 16,976,598 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21519,367,704 - 19,422,702 (+)NCBISscrofa10.2Sscrofa10.2susScr3
MAP3K19
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11019,191,469 - 19,271,547 (-)NCBIChlSab1.1ChlSab1.1chlSab2
Vero_WHO_p1.0NW_0236660613,225,703 - 3,310,488 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Map3k19
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_00462473234,359,557 - 34,429,259 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in Map3k19
1176 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:124
Count of miRNA genes:122
Interacting mature miRNAs:124
Transcripts:ENSMUST00000061512
Prediction methods:Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
11039528Ccc3_mcolitis susceptibility in the Collaborative Cross 3 (mouse)13680142195051546Mouse
27095901Scvln8_msacral vertebrae length 2, 10 week (mouse)194127725172027567Mouse
1302098Eila1_methanol induced locomotor activity 1 (mouse)Not determined1112008822175468938Mouse
1302161Exq2_mexploratory and excitability QTL 2 (mouse)Not determined1118099720152099816Mouse
1357847Jckm2_mjuvenile cystic kidney modifier 2 (mouse)Not determined174991977133290937Mouse
27226779Tibl1_mtibia length 1, 5 week (mouse)195527725162027569Mouse
27226714Metcl1_mmetatarsal-calcaneal length 1, 5 week (mouse)1121727729139727738Mouse
10412185Hcs9_mhepatocarcinogenesis susceptibility 9 (mouse)Not determined163854690189303617Mouse
1301979Melm1_mmelanoma modifier 1 (mouse)Not determined1109638262143638479Mouse
1301722Cia9_mcollagen induced arthritis QTL 9 (mouse)Not determined145783900189303617Mouse
13824984Twq5_mtestis weight QTL 5 (mouse)13069992184732197Mouse
1301149Lrnx12_mlearning-contextual 12 (mouse)Not determined1112008822168186402Mouse
1301123Cd8mts2_mCD8 memory T cell subset 2 (mouse)Not determined196618386130618557Mouse
27226767Tibl10_mtibia length 10, 10 week (mouse)1121727729164827569Mouse
12790994Aaaq1_maortic arch angle QTL 1 (mouse)1109495943143495943Mouse
10045640Jckm4_mjuvenile cystic kidney modifier 4 (mouse)Not determined1116290836150290937Mouse
1301249Sbw1_msplenomegaly-NZB x NZW 1 (mouse)Not determined1112131005146131085Mouse
1301193Lxw3_mlupus BXSB x NZW 3 (mouse)Not determined1102968534136968667Mouse
1558860W10q7_mweight 10 weeks QTL 7 (mouse)Not determined134760138150193871Mouse
10412162Nobq3_mNew Zealand obese QTL 3 (mouse)Not determined1103933405191225397Mouse
12880408V125Dq3_mvitamin D active form serum level QTL 3 (mouse)1122927738156927738Mouse
1357488Splq3_mspleen weight QTL 3 (mouse)Not determined134760138150193871Mouse
4141914Gcsfis_mG-CSF induced splenomegaly (mouse)Not determined74516235148715579Mouse
27095928Pglq6_mpelvic girdle length QTL 6, 10 week (mouse)175976637148775742Mouse
27095931Pglq1_mpelvic girdle length QTL 1, 5 week (mouse)175976637128527737Mouse
27226743Metcl7_mmetatarsal-calcaneal length 7, 10 week (mouse)1121727729153875746Mouse
1301753Tir3a_mtrypansomiasis infection response 3a (mouse)Not determined197053986131054190Mouse
1357439Popoa_mpremature ovulation and primary oocyte arrest (mouse)Not determined182643189135615379Mouse
27226740Metcl13_mmetatarsal-calcaneal length 13, 16 week (mouse)1121727729153775746Mouse
4142291Aec2_mautoimmune exocrinopathy 2 (mouse)Not determined52457737182250592Mouse
1357753Kidq2_mkidney weight QTL 2 (mouse)Not determined134760138150193871Mouse
1300989Lrdg1_mlight induced retinal degeneration 1 (mouse)Not determined173755175147125370Mouse
27226799Feml5_mfemur length 5, 5 week (mouse)1122027729164827569Mouse
27095918Ulnl1_mulna length 1, 5 week (mouse)167339159129727737Mouse
1301536Pbbcp1_mperipheral blood B cell percentage 1 (mouse)Not determined199507660133507845Mouse
27095913Scvln2_msacral vertebrae length 2, 5 week (mouse)194127725148775742Mouse
1357600Obq17_mobesity QTL 17 (mouse)Not determined1110553179144553298Mouse
1301350Nidd4k_mNidd4 on KK-A (mouse)Not determined782291982147125370Mouse
27095915Scvln13_msacral vertebrae length 2, 16 week (mouse)1117527730179827565Mouse
1300841Ssial1_msusceptibility to sialadenitis 1 (mouse)Not determined163920002153557562Mouse
26884448Sklq1_mskull length QTL 1, 5 week (mouse)175976637181327565Mouse
10401248Bglu12_mblood glucose level 12 (mouse)Not determined1110553179144553298Mouse

Markers in Region
RH126586  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381127,851,557 - 127,851,767UniSTSGRCm38
MGSCv371129,748,134 - 129,748,344UniSTSGRCm37
Celera1130,492,765 - 130,492,975UniSTS
Cytogenetic Map1E3UniSTS
cM Map166.6UniSTS


Sequence


Ensembl Acc Id: ENSMUST00000061512   ⟹   ENSMUSP00000056254
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1127,743,008 - 127,768,027 (-)Ensembl
GRCm38.p6 Ensembl1127,815,271 - 127,840,290 (-)Ensembl
Ensembl Acc Id: ENSMUST00000187653   ⟹   ENSMUSP00000140930
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1127,742,982 - 127,768,058 (-)Ensembl
GRCm38.p6 Ensembl1127,815,245 - 127,840,321 (-)Ensembl
Ensembl Acc Id: ENSMUST00000189398   ⟹   ENSMUSP00000140449
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1127,742,982 - 127,768,058 (-)Ensembl
GRCm38.p6 Ensembl1127,815,245 - 127,840,321 (-)Ensembl
Ensembl Acc Id: ENSMUST00000191333   ⟹   ENSMUSP00000141029
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1127,742,982 - 127,768,058 (-)Ensembl
GRCm38.p6 Ensembl1127,815,245 - 127,840,321 (-)Ensembl
Ensembl Acc Id: ENSMUST00000208183   ⟹   ENSMUSP00000146463
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1127,742,528 - 127,782,768 (-)Ensembl
GRCm38.p6 Ensembl1127,814,791 - 127,855,031 (-)Ensembl
Ensembl Acc Id: ENSMUST00000238383   ⟹   ENSMUSP00000158583
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1127,742,982 - 127,768,057 (-)Ensembl
GRCm38.p6 Ensembl1127,815,245 - 127,840,320 (-)Ensembl
RefSeq Acc Id: NM_011737   ⟹   NP_035867
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391127,741,217 - 127,782,763 (-)NCBI
GRCm381127,813,480 - 127,855,026 (-)NCBI
MGSCv371129,711,848 - 129,736,867 (-)RGD
Celera1130,456,718 - 130,481,749 (-)RGD
cM Map1 ENTREZGENE
Sequence:
RefSeq Acc Id: XM_036163719   ⟹   XP_036019612
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391127,741,218 - 127,758,095 (-)NCBI
Sequence:
RefSeq Acc Id: NP_035867   ⟸   NM_011737
- UniProtKB: E9Q3S4 (UniProtKB/Swiss-Prot),   A0A140LHL6 (UniProtKB/TrEMBL)
- Sequence:
Ensembl Acc Id: ENSMUSP00000141029   ⟸   ENSMUST00000191333
Ensembl Acc Id: ENSMUSP00000158583   ⟸   ENSMUST00000238383
Ensembl Acc Id: ENSMUSP00000146463   ⟸   ENSMUST00000208183
Ensembl Acc Id: ENSMUSP00000056254   ⟸   ENSMUST00000061512
Ensembl Acc Id: ENSMUSP00000140930   ⟸   ENSMUST00000187653
Ensembl Acc Id: ENSMUSP00000140449   ⟸   ENSMUST00000189398
RefSeq Acc Id: XP_036019612   ⟸   XM_036163719
- Peptide Label: isoform X1
- UniProtKB: A0A087WS76 (UniProtKB/TrEMBL)
Protein Domains
Protein kinase

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-E9Q3S4-F1-model_v2 AlphaFold E9Q3S4 1-1311 view protein structure


Additional Information

Database Acc Id Source(s)
AGR Gene MGI:1203481 AgrOrtholog
Ensembl Genes ENSMUSG00000051590 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Ensembl Transcript ENSMUST00000061512.5 UniProtKB/Swiss-Prot
  ENSMUST00000187653.8 UniProtKB/TrEMBL
  ENSMUST00000189398.8 UniProtKB/TrEMBL
  ENSMUST00000191333.8 UniProtKB/TrEMBL
  ENSMUST00000208183 ENTREZGENE
  ENSMUST00000208183.3 UniProtKB/TrEMBL
  ENSMUST00000238383.2 UniProtKB/TrEMBL
Gene3D-CATH 1.25.40.20 UniProtKB/TrEMBL
  Transferase(Phosphotransferase) domain 1 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
InterPro Ankyrin_rpt UniProtKB/TrEMBL
  Ankyrin_rpt-contain_sf UniProtKB/TrEMBL
  Kinase-like_dom_sf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  MAP_kinase_kinase_kinase UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Prot_kinase_dom UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Protein_kinase_ATP_BS UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Ser-Thr/Tyr_kinase_cat_dom UniProtKB/TrEMBL
  Ser/Thr_kinase_AS UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report mmu:22625 UniProtKB/Swiss-Prot
MGD MGI:1203481 ENTREZGENE
NCBI Gene 22625 ENTREZGENE
PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  MITOGEN-ACTIVATED PROTEIN KINASE KINASE KINASE 19 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam Ank_2 UniProtKB/TrEMBL
  Pkinase UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Pkinase_Tyr UniProtKB/TrEMBL
PhenoGen Map3k19 PhenoGen
PROSITE ANK_REP_REGION UniProtKB/TrEMBL
  ANK_REPEAT UniProtKB/TrEMBL
  PROTEIN_KINASE_ATP UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  PROTEIN_KINASE_DOM UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  PROTEIN_KINASE_ST UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
SMART ANK UniProtKB/TrEMBL
  S_TKc UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Superfamily-SCOP SSF48403 UniProtKB/TrEMBL
  SSF56112 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt A0A087WR30_MOUSE UniProtKB/TrEMBL
  A0A087WS76 ENTREZGENE, UniProtKB/TrEMBL
  A0A087WSG0_MOUSE UniProtKB/TrEMBL
  A0A140LHL6 ENTREZGENE, UniProtKB/TrEMBL
  A0A571BFV4_MOUSE UniProtKB/TrEMBL
  E9Q3S4 ENTREZGENE, UniProtKB/Swiss-Prot
  Q61157_MOUSE UniProtKB/TrEMBL


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2012-12-25 Map3k19  mitogen-activated protein kinase kinase kinase 19  Ysk4  Yeast Sps1/Ste20-related kinase 4 (S. cerevisiae)  Symbol and/or name change 5135510 APPROVED