Car10 (carbonic anhydrase 10) - Rat Genome Database

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Gene: Car10 (carbonic anhydrase 10) Mus musculus
Analyze
Symbol: Car10
Name: carbonic anhydrase 10
RGD ID: 1558371
MGI Page MGI
Description: Predicted to have hydro-lyase activity. Predicted to be involved in one-carbon metabolic process. Is expressed in several structures, including cardiovascular system; central nervous system; foregut; integumental system; and respiratory system. Orthologous to human CA10 (carbonic anhydrase 10); INTERACTS WITH 1,2-dichloroethane; 3,4-methylenedioxymethamphetamine; choline.
Type: protein-coding
RefSeq Status: VALIDATED
Also known as: 2700029L05Rik; BB085816; CA-RP X; Ca10; carbonic anhydrase-related protein 10; carbonic anhydrase-related protein X; CARP X
RGD Orthologs
Human
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: GRCm38 - Mouse Genome Assembly GRCm38
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391192,988,807 - 93,492,577 (+)NCBIGRCm39mm39
GRCm39 Ensembl1192,988,854 - 93,492,575 (+)Ensembl
GRCm381193,096,805 - 93,601,751 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1193,098,028 - 93,601,749 (+)EnsemblGRCm38mm10GRCm38
MGSCv371192,960,604 - 93,463,065 (+)NCBIGRCm37mm9NCBIm37
MGSCv361192,914,500 - 93,417,363 (+)NCBImm8
Celera11102,697,483 - 103,221,769 (+)NCBICelera
Cytogenetic Map11DNCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Function

References

Additional References at PubMed
PMID:8889548   PMID:10349636   PMID:11042159   PMID:11076861   PMID:12477932   PMID:12531530   PMID:14610273   PMID:14612590   PMID:14681479   PMID:15489334   PMID:16141072   PMID:16141073  
PMID:16602821   PMID:17626619   PMID:18554416   PMID:21267068   PMID:21677750   PMID:21873635   PMID:23233153   PMID:24192035   PMID:24952961   PMID:28154140   PMID:31493975  


Genomics

Comparative Map Data
Car10
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391192,988,807 - 93,492,577 (+)NCBIGRCm39mm39
GRCm39 Ensembl1192,988,854 - 93,492,575 (+)Ensembl
GRCm381193,096,805 - 93,601,751 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1193,098,028 - 93,601,749 (+)EnsemblGRCm38mm10GRCm38
MGSCv371192,960,604 - 93,463,065 (+)NCBIGRCm37mm9NCBIm37
MGSCv361192,914,500 - 93,417,363 (+)NCBImm8
Celera11102,697,483 - 103,221,769 (+)NCBICelera
Cytogenetic Map11DNCBI
CA10
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38.p13 Ensembl1751,630,313 - 52,160,017 (-)EnsemblGRCh38hg38GRCh38
GRCh381751,630,313 - 52,160,023 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh371749,707,674 - 50,237,383 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 361747,062,673 - 47,592,376 (-)NCBINCBI36hg18NCBI36
Build 341747,062,682 - 47,591,086NCBI
Celera1746,168,954 - 46,698,633 (-)NCBI
Cytogenetic Map17q21.33-q22NCBI
HuRef1745,077,023 - 45,606,524 (-)NCBIHuRef
CHM1_11749,772,091 - 50,302,474 (-)NCBICHM1_1
Car10
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mRatBN7.21078,055,875 - 78,556,490 (+)NCBI
Rnor_6.0 Ensembl1080,790,168 - 81,296,363 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_6.01080,790,151 - 81,297,621 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.01080,633,872 - 81,133,347 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41081,756,486 - 82,238,335 (+)NCBIRGSC3.4rn4RGSC3.4
Celera1076,855,697 - 77,353,776 (+)NCBICelera
Cytogenetic Map10q26NCBI
Ca10
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554519,877,223 - 10,362,414 (+)EnsemblChiLan1.0
ChiLan1.0NW_0049554519,877,768 - 10,362,363 (+)NCBIChiLan1.0ChiLan1.0
CA10
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
PanPan1.11750,587,548 - 51,126,498 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1750,587,548 - 51,124,265 (-)Ensemblpanpan1.1panPan2
Mhudiblu_PPA_v01745,718,219 - 46,257,295 (-)NCBIMhudiblu_PPA_v0panPan3
CA10
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1927,382,508 - 27,863,806 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl927,383,588 - 27,862,086 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha926,709,833 - 27,197,336 (-)NCBI
ROS_Cfam_1.0928,176,480 - 28,657,670 (-)NCBI
UMICH_Zoey_3.1926,942,042 - 27,417,434 (-)NCBI
UNSW_CanFamBas_1.0927,201,860 - 27,676,691 (-)NCBI
UU_Cfam_GSD_1.0927,332,548 - 27,807,012 (-)NCBI
Ca10
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440560226,798,112 - 27,274,308 (-)NCBI
SpeTri2.0NW_0049364909,800,533 - 10,277,034 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
CA10
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1227,957,732 - 28,617,585 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11227,979,321 - 28,619,022 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21228,270,028 - 28,295,145 (-)NCBISscrofa10.2Sscrofa10.2susScr3
CA10
(Chlorocebus sabaeus - African green monkey)
Vervet AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11641,169,232 - 41,720,008 (+)NCBI
Ca10
(Heterocephalus glaber - naked mole-rat)
Molerat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_0046247957,284,520 - 7,792,200 (-)NCBI

Position Markers
18.MMHAP86FRF9.seq  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381193,164,858 - 93,165,009UniSTSGRCm38
MGSCv371193,026,172 - 93,026,323UniSTSGRCm37
Celera11102,762,928 - 102,763,079UniSTS
Cytogenetic Map11CUniSTS
Whitehead_YAC11 UniSTS
30.MMHAP29FRB12.seq  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381193,447,329 - 93,447,497UniSTSGRCm38
MGSCv371193,308,643 - 93,308,811UniSTSGRCm37
Celera11103,067,528 - 103,067,696UniSTS
Cytogenetic Map11CUniSTS
Whitehead_YAC10 UniSTS
Car10  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381193,600,324 - 93,601,188UniSTSGRCm38
MGSCv371193,461,638 - 93,462,502UniSTSGRCm37
Celera11103,220,346 - 103,221,211UniSTS
Cytogenetic Map11CUniSTS
cM Map11 UniSTS
D10Rat93  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381193,249,676 - 93,249,859UniSTSGRCm38
MGSCv371193,110,990 - 93,111,173UniSTSGRCm37
Celera11102,854,933 - 102,855,117UniSTS
Cytogenetic Map11CUniSTS


QTLs in Region (GRCm38)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
13208558Lgth12_mbody length 12 (mouse)11400000095000000Mouse
1357859Lvrq7_mliver weight QTL 7 (mouse)Not determined1112318637118131898Mouse
39128214Lwq20_mliver weight QTL 20 (mouse)1112318637118131898Mouse
4141894Nidd6k_mNidd6 on KK-A (mouse)Not determined1917420497007000Mouse
10412246Dfs2_mdental fluorosis suseptibility 2 (mouse)Not determined112185736495990405Mouse
4141367Inf1_macute ozone induced inflammation (mouse)Not determined44739211113167183Mouse
4142121Tmc1m2_mTmc1 modifier 2 (mouse)Not determined1156973201114267131Mouse
1301319Dautb4_mdopamine uptake transporter binding 4 (mouse)Not determined116226517996265327Mouse
27226730Tibmd1_mtibia midshaft diameter 1, 5 week (mouse)1162700000109500000Mouse
10044004Stzid3_mstreptozotocin induced diabetes susceptibility 3 (mouse)Not determined116342858194173092Mouse
11039501Ltpr6a_mLeishmania tropica response 6a (mouse)116493951098939647Mouse
11039502Ltpr6b_mLeishmania tropica response 6b (mouse)116493951098939647Mouse
11039515Ltpr6_mLeishmania tropica response 6 (mouse)116493951098939647Mouse
1301546Pcir2_mperiosteal circumference 2 (mouse)Not determined1166842594100842826Mouse
1357766Si5lq6_mserum IGFBP-5 level QTL 6 (mouse)Not determined1166842594100842826Mouse
4141012Femwf6_mfemur work to failure 6 (mouse)Not determined66842594100842826Mouse
1301833Tbbmd5_mtotal body bone mineral density 5 (mouse)Not determined1166842594100842826Mouse
1300784Prdt3_mprion disease incubation time 3 (mouse)Not determined1166842594100842826Mouse
1300628Lgth6_mbody length 6 (mouse)Not determined1166842594100842826Mouse
27226783Tibl5_mtibia length 5, 5 week (mouse)1168300000102000000Mouse
1300651Pcyts3_mplasmacytoma susceptibility 3 (mouse)Not determined1170800372104800540Mouse
1301681Sle13_msystematic lupus erythematosus susceptibility 13 (mouse)Not determined1170800372104800540Mouse
1558812Rafar_mretinoic acid induced forelimb autopod reduction (mouse)Not determined1170800372104800540Mouse
4141339Nilac2_mnicotine induced locomotor activity 2 (mouse)Not determined1170800372104800540Mouse
1301404Sbmd4_mspinal bone mineral density 4 (mouse)Not determined1172128823106128908Mouse
1301310Tmevd5_mTheiler's murine encephalomyelitis virus induced demyelinating disease susceptibility 5 (mouse)Not determined1172835299106835463Mouse
4142348Pstc2_mperiosteal circumference 2 (mouse)Not determined1172927789106927907Mouse
10043866Adip19_madiposity 19 (mouse)Not determined1172927789106927907Mouse
11038695Par8_mpulmonary adenoma resistance 8 (mouse)1177172953111173092Mouse
1301414Heal10_mwound healing/regeneration 10 (mouse)Not determined1177546357111546496Mouse
10045616Heal25_mwound healing/regeneration 25 (mouse)Not determined1177546357111546496Mouse
1302124Eae7_msusceptibility to experimental allergic encephalomyelitis 7 (mouse)Not determined117768304799486994Mouse
10413882Moe1_mmodifier of epilepsy 1 (mouse)1177880152111880273Mouse
1301640Lore4_mloss of righting induced by ethanol 4 (mouse)Not determined1179265183107725646Mouse
14746970Manh71_mmandible shape 71 (mouse)1179525431113525431Mouse
10043865T2dm5sa_mtype 2 diabetes mellitus 5 in SMXA RI mice (mouse)Not determined1179922933104611872Mouse
27226758Femd3_mfemur midshaft diameter 3, 5 week (mouse)1181000000102000000Mouse
1300649Crhq1_mcompensatory renal hypertrophy QTL 1 (mouse)Not determined1181683655115683810Mouse
1300766Skull16_mskull morphology 16 (mouse)Not determined1181683655115683810Mouse
10412288Carg4_mCandida albicans resistance gene 4 (mouse)Not determined1181919441115919441Mouse
1301072Eae22_mexperimental allergic encephalomyelitis 22 (mouse)Not determined1182486872116486994Mouse
14747003Mancz9_mmandible centroid size 9 (mouse)1185954085119954085Mouse
15039374Adip29_madiposity 29 (mouse)1186717494120717494Mouse
15039376Bw42_mbody weight QTL 42 (mouse)1186717494120717494Mouse
15014785Mvlq1_mmacrovesicular liver lesion QTL 1 (mouse)1186717494120717494Mouse
27226789Feml16_mfemur length 16, 10 week (mouse)1187600000126900000Mouse
10044007Hbnr14_mHeligmosomoides bakeri nematode resistance 14 (mouse)Not determined1187611774121611872Mouse
1357631Motr1_mmodifier of tubby retinal degeneration 1 (mouse)Not determined1187800372103383289Mouse
1301491Abbp4_mA/J and C57BL/6 blood pressure 4 (mouse)Not determined118880876299190771Mouse
1301313Pas5a_mpulmonary adenoma susceptibility 5a (mouse)Not determined118907597898974942Mouse
11251723Ewc5_methanol withdrawal and consumption 5 (mouse)1189978425122082543Mouse
1302034Pkccl_mprotein kinase C content in lungs (mouse)Not determined1191713782122082543Mouse
1558753Ath19_matherosclerosis 19 (mouse)Not determined1191713782122082543Mouse
10045617Heal26_mwound healing/regeneration 26 (mouse)Not determined1193048547112653728Mouse
1301095El6_mepilepsy 6 (mouse)Not determined1193338357122082543Mouse

miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:1923
Count of miRNA genes:658
Interacting mature miRNAs:836
Transcripts:ENSMUST00000042943, ENSMUST00000092780, ENSMUST00000107858, ENSMUST00000107859, ENSMUST00000107861, ENSMUST00000107863, ENSMUST00000149611
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts NM_001361707 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001361708 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_028296 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_030246367 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_030246368 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AB080741 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK012302 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK035758 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK036003 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK038426 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK038512 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK038695 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK132222 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK162576 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AL683819 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AL713960 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AL731728 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AL731849 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AL805922 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AL954830 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC017606 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC066111 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH466556 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CJ280653 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: ENSMUST00000042943   ⟹   ENSMUSP00000035585
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl1193,098,404 - 93,601,745 (+)Ensembl
RefSeq Acc Id: ENSMUST00000092780
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl1193,099,290 - 93,185,969 (+)Ensembl
RefSeq Acc Id: ENSMUST00000107858   ⟹   ENSMUSP00000103490
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl1193,098,414 - 93,601,273 (+)Ensembl
RefSeq Acc Id: ENSMUST00000107859   ⟹   ENSMUSP00000103491
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl1193,098,404 - 93,368,999 (+)Ensembl
RefSeq Acc Id: ENSMUST00000107861   ⟹   ENSMUSP00000103493
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl1193,098,404 - 93,491,923 (+)Ensembl
RefSeq Acc Id: ENSMUST00000107863   ⟹   ENSMUSP00000103495
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl1193,099,290 - 93,601,749 (+)Ensembl
RefSeq Acc Id: ENSMUST00000149611
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl1193,098,028 - 93,099,866 (+)Ensembl
RefSeq Acc Id: NM_001361707   ⟹   NP_001348636
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391192,989,192 - 93,492,577 (+)NCBI
GRCm381193,098,366 - 93,601,751 (+)NCBI
Sequence:
RefSeq Acc Id: NM_001361708   ⟹   NP_001348637
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391192,989,192 - 93,492,577 (+)NCBI
GRCm381193,098,366 - 93,601,751 (+)NCBI
Sequence:
RefSeq Acc Id: NM_028296   ⟹   NP_082572
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391192,990,116 - 93,492,577 (+)NCBI
GRCm381193,099,290 - 93,601,751 (+)NCBI
MGSCv371192,960,604 - 93,463,065 (+)RGD
Celera11102,697,483 - 103,221,769 (+)RGD
cM Map11 ENTREZGENE
Sequence:
RefSeq Acc Id: XM_030246367   ⟹   XP_030102227
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391192,988,807 - 93,492,100 (+)NCBI
GRCm381193,096,805 - 93,601,274 (+)NCBI
Sequence:
RefSeq Acc Id: XM_030246368   ⟹   XP_030102228
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391192,988,825 - 93,492,100 (+)NCBI
GRCm381193,096,805 - 93,601,274 (+)NCBI
Sequence:
Reference Sequences
RefSeq Acc Id: NP_082572   ⟸   NM_028296
- Peptide Label: precursor
- UniProtKB: P61215 (UniProtKB/Swiss-Prot),   Q3V1V7 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_030102228   ⟸   XM_030246368
- Peptide Label: isoform X1
RefSeq Acc Id: XP_030102227   ⟸   XM_030246367
- Peptide Label: isoform X1
RefSeq Acc Id: NP_001348636   ⟸   NM_001361707
- Peptide Label: precursor
RefSeq Acc Id: NP_001348637   ⟸   NM_001361708
- Peptide Label: precursor
RefSeq Acc Id: ENSMUSP00000103491   ⟸   ENSMUST00000107859
RefSeq Acc Id: ENSMUSP00000103490   ⟸   ENSMUST00000107858
RefSeq Acc Id: ENSMUSP00000103493   ⟸   ENSMUST00000107861
RefSeq Acc Id: ENSMUSP00000103495   ⟸   ENSMUST00000107863
RefSeq Acc Id: ENSMUSP00000035585   ⟸   ENSMUST00000042943
Protein Domains
Alpha-carbonic anhydrase

Promoters
RGD ID:6820530
Promoter ID:MM_KWN:9208
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:Brain
Transcripts:ENSMUST00000092780,   NM_028296
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv361192,960,741 - 92,961,241 (+)MPROMDB
RGD ID:8676172
Promoter ID:EPDNEW_M16116
Type:initiation region
Name:Car10_1
Description:Mus musculus carbonic anhydrase 10 , transcript variant 3, mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_M16117  
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm381193,098,392 - 93,098,452EPDNEW
RGD ID:8676174
Promoter ID:EPDNEW_M16117
Type:initiation region
Name:Car10_2
Description:Mus musculus carbonic anhydrase 10 , transcript variant 3, mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_M16116  
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm381193,099,296 - 93,099,356EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:1919855 AgrOrtholog
Ensembl Genes ENSMUSG00000056158 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Ensembl Protein ENSMUSP00000035585 ENTREZGENE, UniProtKB/Swiss-Prot
  ENSMUSP00000103490 ENTREZGENE, UniProtKB/TrEMBL
  ENSMUSP00000103491 UniProtKB/TrEMBL
  ENSMUSP00000103493 UniProtKB/TrEMBL
  ENSMUSP00000103495 ENTREZGENE, UniProtKB/Swiss-Prot
Ensembl Transcript ENSMUST00000042943 ENTREZGENE, UniProtKB/Swiss-Prot
  ENSMUST00000107858 ENTREZGENE, UniProtKB/TrEMBL
  ENSMUST00000107859 UniProtKB/TrEMBL
  ENSMUST00000107861 UniProtKB/TrEMBL
  ENSMUST00000107863 ENTREZGENE, UniProtKB/Swiss-Prot
Gene3D-CATH 3.10.200.10 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
InterPro alpha_CARP_X/XI UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  CA10 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  CA_dom UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  CA_dom_sf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Carbonic_anhydrase_a-class UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report mmu:72605 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
MGD MGI:1919855 ENTREZGENE
NCBI Gene 72605 ENTREZGENE
PANTHER PTHR18952 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  PTHR18952:SF91 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam Carb_anhydrase UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen Car10 PhenoGen
PROSITE ALPHA_CA_2 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
SMART Carb_anhydrase UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Superfamily-SCOP SSF51069 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt CAH10_MOUSE UniProtKB/Swiss-Prot
  E9Q2V1_MOUSE UniProtKB/TrEMBL
  P61215 ENTREZGENE
  Q3TRQ4_MOUSE UniProtKB/TrEMBL
  Q3V1V7 ENTREZGENE, UniProtKB/TrEMBL
  Q6NZJ2_MOUSE UniProtKB/TrEMBL
  Q78UF4_MOUSE UniProtKB/TrEMBL
  Q8BZD6_MOUSE UniProtKB/TrEMBL
  Q9CZQ3_MOUSE UniProtKB/TrEMBL