Eefsec (eukaryotic elongation factor, selenocysteine-tRNA-specific) - Rat Genome Database
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) RatMine GViewer (Genome Viewer) Overgo Probe Designer ACP Haplotyper Genome Scanner
Aging & Age-Related Disease Cancer Cardiovascular Disease COVID-19 Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models   new Genetic Models Autism Models PhenoMiner (Quantitative Phenotypes) Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes GERRC (Gene Editing Rat Resource Center) Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Poster Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources
Gene: Eefsec (eukaryotic elongation factor, selenocysteine-tRNA-specific) Mus musculus
Analyze
Symbol: Eefsec
Name: eukaryotic elongation factor, selenocysteine-tRNA-specific
RGD ID: 1558368
MGI Page MGI
Description: Orthologous to human EEFSEC (eukaryotic elongation factor, selenocysteine-tRNA specific); INTERACTS WITH 1,2-dimethylhydrazine; 2,3,7,8-tetrachlorodibenzodioxine; aflatoxin B1.
Type: protein-coding
RefSeq Status: VALIDATED
Also known as: elongation factor sec; MJ0495-like protein SelB; mSelB; sec; Selb; selenocysteine-specific elongation factor
RGD Orthologs
Human
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: GRCm38 - Mouse Genome Assembly GRCm38
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39688,234,316 - 88,423,546 (-)NCBIGRCm39mm39
GRCm39 Ensembl688,234,316 - 88,423,521 (-)Ensembl
GRCm38688,257,334 - 88,446,552 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl688,257,334 - 88,446,539 (-)EnsemblGRCm38mm10GRCm38
MGSCv37688,207,328 - 88,396,533 (-)NCBIGRCm37mm9NCBIm37
MGSCv36688,222,975 - 88,412,161 (-)NCBImm8
Celera690,194,541 - 90,384,154 (-)NCBICelera
Cytogenetic Map6D1NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Function

References

Additional References at PubMed
PMID:8889548   PMID:10349636   PMID:10970870   PMID:10992298   PMID:11042159   PMID:11076861   PMID:11217851   PMID:11265756   PMID:11890935   PMID:12477932   PMID:12520002   PMID:14610273  
PMID:15782199   PMID:16141072   PMID:16141073   PMID:16508009   PMID:17277741   PMID:18614015   PMID:21873635   PMID:22992746   PMID:27802322   PMID:30196744  


Genomics

Comparative Map Data
Eefsec
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39688,234,316 - 88,423,546 (-)NCBIGRCm39mm39
GRCm39 Ensembl688,234,316 - 88,423,521 (-)Ensembl
GRCm38688,257,334 - 88,446,552 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl688,257,334 - 88,446,539 (-)EnsemblGRCm38mm10GRCm38
MGSCv37688,207,328 - 88,396,533 (-)NCBIGRCm37mm9NCBIm37
MGSCv36688,222,975 - 88,412,161 (-)NCBImm8
Celera690,194,541 - 90,384,154 (-)NCBICelera
Cytogenetic Map6D1NCBI
EEFSEC
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38.p13 Ensembl3128,153,481 - 128,408,646 (+)EnsemblGRCh38hg38GRCh38
GRCh383128,153,453 - 128,426,193 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh373127,872,324 - 128,127,489 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 363129,355,003 - 129,610,179 (+)NCBINCBI36hg18NCBI36
Celera3126,301,728 - 126,556,922 (+)NCBI
Cytogenetic Map3q21.3NCBI
HuRef3125,258,480 - 125,513,483 (+)NCBIHuRef
CHM1_13127,835,315 - 128,090,481 (+)NCBICHM1_1
Eefsec
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mRatBN7.24120,719,616 - 120,915,801 (-)NCBI
Rnor_6.0 Ensembl4120,194,335 - 120,390,187 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_6.04120,194,335 - 120,390,203 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.04185,435,789 - 185,630,486 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.44122,340,376 - 122,539,564 (-)NCBIRGSC3.4rn4RGSC3.4
Celera4109,675,980 - 109,871,739 (-)NCBICelera
Cytogenetic Map4q34NCBI
Eefsec
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495542915,380,601 - 15,585,866 (-)EnsemblChiLan1.0
ChiLan1.0NW_00495542915,381,257 - 15,598,355 (-)NCBIChiLan1.0ChiLan1.0
EEFSEC
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
PanPan1.13132,564,877 - 132,819,647 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl3132,564,877 - 132,819,647 (+)Ensemblpanpan1.1panPan2
Mhudiblu_PPA_v03125,199,895 - 125,456,133 (+)NCBIMhudiblu_PPA_v0panPan3
EEFSEC
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1 Ensembl202,155,822 - 2,405,418 (+)EnsemblCanFam3.1canFam3CanFam3.1
CanFam3.1202,138,475 - 2,405,420 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
Eefsec
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
SpeTri2.0NW_004936798448,114 - 512,234 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
EEFSEC
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1372,020,299 - 72,195,930 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11372,041,409 - 72,196,345 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
EEFSEC
(Chlorocebus sabaeus - African green monkey)
Vervet AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.12252,633,932 - 52,887,812 (-)NCBI
ChlSab1.1 Ensembl2252,633,274 - 52,887,838 (-)Ensembl
Eefsec
(Heterocephalus glaber - naked mole-rat)
Molerat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_004624961195,904 - 414,552 (-)NCBI

Position Markers
18.MMHAP4FLF3.seq  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38688,263,499 - 88,263,666UniSTSGRCm38
MGSCv37688,213,493 - 88,213,660UniSTSGRCm37
Celera690,200,706 - 90,200,873UniSTS
Cytogenetic Map6D2UniSTS
Whitehead_YAC6 UniSTS
26.MMHAP36FLA5.seq  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38688,354,232 - 88,354,422UniSTSGRCm38
MGSCv37688,304,226 - 88,304,416UniSTSGRCm37
Celera690,291,439 - 90,291,629UniSTS
Cytogenetic Map6D2UniSTS
Whitehead_YAC6 UniSTS


QTLs in Region (GRCm38)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
25440480Moaq2_mmodifier of alien QTL 2 (mouse)61117500000Mouse
26884414Bzwq12_mbi-zygomatic width QTL 12, 16 week (mouse)63400000139100000Mouse
4142126W3q3_mweight 3 weeks QTL 3 (mouse)Not determined450382396656149Mouse
4142361W10q11_mweight 10 weeks QTL 11 (mouse)Not determined450382396656149Mouse
4142271Egq8_mearly growth QTL 8 (mouse)Not determined450382396656149Mouse
4142232W6q4_mweight 6 weeks QTL 4 (mouse)Not determined450382396656149Mouse
1558984Cplaq9_mcircadian period of locomotor activity 9 (mouse)Not determined63866962592607450Mouse
10412157Fl1n_mfatty liver 1 in NSY (mouse)Not determined645314059128835032Mouse
4142259Tabw2_mtally ho associated body weight 2 (mouse)Not determined46935985136423692Mouse
25314319Histh6_mhistamine hypersensitivity 6 (mouse)648720000125360000Mouse
25314320Histh5_mhistamine hypersensitivity 5 (mouse)648720000148450000Mouse
1301962Eila2_methanol induced locomotor activity 2 (mouse)Not determined648726556125356785Mouse
1357683Igf1sl1_mIGF-1 serum levels 1 (mouse)Not determined652161713116155267Mouse
4141028Mclr_mmethylcholanthrene lymphoma resistance (mouse)Not determined5437342788379171Mouse
15039373Adip28_madiposity 28 (mouse)65630821190308211Mouse
15039375Bw41_mbody weight QTL 41 (mouse)65630821190308211Mouse
1558977Skmw10_mskeletal muscle weight 10 (mouse)Not determined65844758392447710Mouse
10043972Obq28_mobesity QTL 28 (mouse)Not determined65854043392540433Mouse
1301740Bwq2_mbody weight QTL 2 (mouse)Not determined66005768094057799Mouse
1301369Im4_mimmunoregulatory 4 (mouse)Not determined66348473897484905Mouse
1300650Bw18_mbody weight QTL 18 (mouse)Not determined666713869100714031Mouse
1301876Bits2_mbitterness sensitivity 2 (mouse)Not determined670425898104426034Mouse
1301813Skl3_mskeletal size (tail length) 3 (mouse)Not determined670425898104426034Mouse
1301034Egrm2_mearly growth rate (mouse)Not determined670425898104426034Mouse
1302020Bbaa20_mB.burgdorferi-associated arthritis 20 (mouse)Not determined67132262193464093Mouse
1300869Stheal5_msoft tissue heal 5 (mouse)Not determined671575060105575178Mouse
1300954Fcsa1_mfemoral cross-sectional area 1 (mouse)Not determined671981024105981170Mouse
1301521Pas1c_mpulmonary adenoma susceptibility 1c (mouse)Not determined671981024105981170Mouse
13506930Recrq9_mrecombination rate in male meiosis QTL 9 (mouse)673500000134700000Mouse
1301320Ots1_movarian teratoma susceptibility 1 (mouse)Not determined675447583104503555Mouse
1301571Arrd1_mage-related retinal degeneration 1 (mouse)Not determined67554435692607450Mouse
1300674Nidd3n_mnon-insulin-dependent diabetes mellitus 3 in NSY (mouse)Not determined67554435694225955Mouse
10412195Efw_mepididymal fat weight (mouse)Not determined67554435694225955Mouse
10043901Pfat5_mpredicted fat percentage 5 (mouse)Not determined675607306109607450Mouse
10412208Cypr4_mcytokine production 4 (mouse)Not determined675716503109716697Mouse
1357875Pfat2_mpredicted fat percentage 2 (mouse)Not determined676463949110464093Mouse
14697704Stsl4_mSalmonella typhimurium susceptibility locus 4 (mouse)67710000090000000Mouse
13824985Alh1_mamplitude of lateral head displacement 1 (mouse)67800000097000000Mouse
4141376Dbm1_mdiabetes modifier 1 (mouse)Not determined678629504121115387Mouse
14696731Pairq1_mP. aeruginosa infection resistance QTL 1 (mouse)681500000102200000Mouse
10043864T2dm4sa_mtype 2 diabetes mellitus 4 in SMXA RI mice (mouse)Not determined683713869147052561Mouse
11251720Ewc4_methanol withdrawal and consumption 4 (mouse)684122513118122513Mouse
1301687Mnic2_mmacronutrient intake (mouse)Not determined686806805113544602Mouse
1301744Hdlq11_mHDL QTL 11 (mouse)Not determined687503360121503555Mouse

miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:424
Count of miRNA genes:297
Interacting mature miRNAs:347
Transcripts:ENSMUST00000165242
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts NM_023060 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NR_149744 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006506465 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_030255536 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_030255537 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_030255538 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AC153694 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AC153927 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AF268871 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AF283518 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK028424 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK087501 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK147924 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK171885 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK183771 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK184409 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK184750 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK186069 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK187190 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK189864 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK191816 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK195339 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK207457 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK212932 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK216395 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC024915 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC099675 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BY015462 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH466523 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: ENSMUST00000165242   ⟹   ENSMUSP00000131207
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl688,257,334 - 88,446,539 (-)Ensembl
RefSeq Acc Id: ENSMUST00000203213   ⟹   ENSMUSP00000145480
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl688,258,273 - 88,446,514 (-)Ensembl
RefSeq Acc Id: ENSMUST00000203886   ⟹   ENSMUSP00000145017
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl688,297,923 - 88,439,835 (-)Ensembl
RefSeq Acc Id: ENSMUST00000204459   ⟹   ENSMUSP00000144824
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl688,281,652 - 88,446,502 (-)Ensembl
RefSeq Acc Id: ENSMUST00000205014   ⟹   ENSMUSP00000145448
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl688,298,106 - 88,446,484 (-)Ensembl
RefSeq Acc Id: ENSMUST00000205179   ⟹   ENSMUSP00000144839
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl688,257,873 - 88,446,527 (-)Ensembl
RefSeq Acc Id: NM_023060   ⟹   NP_075547
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39688,234,316 - 88,423,521 (-)NCBI
GRCm38688,257,334 - 88,446,539 (-)NCBI
MGSCv37688,207,328 - 88,396,533 (-)RGD
Celera690,194,541 - 90,384,154 (-)RGD
cM Map6 ENTREZGENE
Sequence:
RefSeq Acc Id: NR_149744
RefSeq Status: VALIDATED
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39688,234,316 - 88,423,521 (-)NCBI
GRCm38688,257,334 - 88,446,539 (-)NCBI
Sequence:
RefSeq Acc Id: XM_006506465   ⟹   XP_006506528
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39688,234,847 - 88,423,546 (-)NCBI
GRCm38688,257,865 - 88,446,552 (-)NCBI
Sequence:
RefSeq Acc Id: XM_030255536   ⟹   XP_030111396
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39688,234,848 - 88,423,271 (-)NCBI
GRCm38688,257,865 - 88,446,527 (-)NCBI
Sequence:
RefSeq Acc Id: XM_030255537   ⟹   XP_030111397
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39688,234,847 - 88,423,498 (-)NCBI
GRCm38688,257,865 - 88,446,527 (-)NCBI
Sequence:
RefSeq Acc Id: XM_030255538   ⟹   XP_030111398
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39688,234,847 - 88,423,514 (-)NCBI
GRCm38688,257,865 - 88,446,527 (-)NCBI
Sequence:
Reference Sequences
RefSeq Acc Id: NP_075547   ⟸   NM_023060
- UniProtKB: Q9JHW4 (UniProtKB/Swiss-Prot),   Q3UGH6 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006506528   ⟸   XM_006506465
- Peptide Label: isoform X1
- Sequence:
RefSeq Acc Id: XP_030111398   ⟸   XM_030255538
- Peptide Label: isoform X3
RefSeq Acc Id: XP_030111397   ⟸   XM_030255537
- Peptide Label: isoform X2
RefSeq Acc Id: XP_030111396   ⟸   XM_030255536
- Peptide Label: isoform X2
RefSeq Acc Id: ENSMUSP00000145017   ⟸   ENSMUST00000203886
RefSeq Acc Id: ENSMUSP00000145480   ⟸   ENSMUST00000203213
RefSeq Acc Id: ENSMUSP00000145448   ⟸   ENSMUST00000205014
RefSeq Acc Id: ENSMUSP00000144839   ⟸   ENSMUST00000205179
RefSeq Acc Id: ENSMUSP00000144824   ⟸   ENSMUST00000204459
RefSeq Acc Id: ENSMUSP00000131207   ⟸   ENSMUST00000165242
Protein Domains
GTP_EFTU_D2   tr-type G

Promoters
RGD ID:6839215
Promoter ID:MM_KWN:46818
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:3T3L1_Day1,   3T3L1_Day2,   BoneMarrow_0Hour,   BoneMarrow_2Hour,   BoneMarrow_4Hour,   Brain,   ES_Cell,   Liver,   Lung,   MEF_B4,   MEF_B6,   Spleen
Transcripts:NM_023060
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv36688,396,356 - 88,397,487 (-)MPROMDB
RGD ID:6890390
Promoter ID:EPDNEW_M8636
Type:initiation region
Name:Eefsec_1
Description:Mus musculus eukaryotic elongation factor, selenocysteine-tRNA-specific, transcript variant 1, mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38688,446,507 - 88,446,567EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:2137092 AgrOrtholog
Ensembl Genes ENSMUSG00000033216 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Ensembl Protein ENSMUSP00000131207 ENTREZGENE, UniProtKB/Swiss-Prot
  ENSMUSP00000144824 UniProtKB/TrEMBL
  ENSMUSP00000144839 UniProtKB/TrEMBL
  ENSMUSP00000145017 UniProtKB/TrEMBL
  ENSMUSP00000145448 UniProtKB/TrEMBL
  ENSMUSP00000145480 UniProtKB/TrEMBL
Ensembl Transcript ENSMUST00000165242 ENTREZGENE, UniProtKB/Swiss-Prot
  ENSMUST00000203213 UniProtKB/TrEMBL
  ENSMUST00000203886 UniProtKB/TrEMBL
  ENSMUST00000204459 UniProtKB/TrEMBL
  ENSMUST00000205014 UniProtKB/TrEMBL
  ENSMUST00000205179 UniProtKB/TrEMBL
InterPro EFTu-like_2 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  P-loop_NTPase UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Small_GTP-bd_dom UniProtKB/TrEMBL
  TF_GTP-bd_dom UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Transl_B-barrel_sf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report mmu:65967 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
MGD MGI:2137092 ENTREZGENE
NCBI Gene 65967 ENTREZGENE
Pfam GTP_EFTU UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  GTP_EFTU_D2 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen Eefsec PhenoGen
PRINTS ELONGATNFCT UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PROSITE G_TR_2 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Superfamily-SCOP SSF50447 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  SSF52540 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
TIGRFAMs small_GTP UniProtKB/TrEMBL
UniProt A0A0N4SUU3_MOUSE UniProtKB/TrEMBL
  A0A0N4SUV6_MOUSE UniProtKB/TrEMBL
  A0A0N4SVA4_MOUSE UniProtKB/TrEMBL
  A0A0N4SWB3_MOUSE UniProtKB/TrEMBL
  A0A0N4SWD9_MOUSE UniProtKB/TrEMBL
  Q3TAF0_MOUSE UniProtKB/TrEMBL
  Q3UGH6 ENTREZGENE, UniProtKB/TrEMBL
  Q499X6_MOUSE UniProtKB/TrEMBL
  Q8BN64_MOUSE UniProtKB/TrEMBL
  Q9JHW4 ENTREZGENE, UniProtKB/Swiss-Prot
UniProt Secondary Q6GTZ5 UniProtKB/Swiss-Prot