Mrpl19 (mitochondrial ribosomal protein L19) - Rat Genome Database
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Gene: Mrpl19 (mitochondrial ribosomal protein L19) Mus musculus
Analyze
Symbol: Mrpl19
Name: mitochondrial ribosomal protein L19
RGD ID: 1558315
MGI Page MGI
Description: Is expressed in several structures, including early conceptus; gonad; heart; liver; and metanephros. Orthologous to human MRPL19 (mitochondrial ribosomal protein L19); INTERACTS WITH 1,2-dichloroethane; 1,2-dimethylhydrazine; 17alpha-ethynylestradiol.
Type: protein-coding
RefSeq Status: VALIDATED
Also known as: 39S ribosomal protein L19, mitochondrial; 9030416F12Rik; 9130412E02Rik; D6Ertd157; D6Ertd157e; L19mt; MRP-; MRP-L15; MRP-L19; ribosomal protein, mitochondrial, L15; RL; RLX1; Rpm; Rpml15
RGD Orthologs
Human
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: GRCm38 - Mouse Genome Assembly GRCm38
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39681,934,807 - 81,942,930 (-)NCBIGRCm39mm39
GRCm39 Ensembl681,934,832 - 81,942,939 (-)Ensembl
GRCm38681,957,826 - 81,965,949 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl681,957,851 - 81,965,958 (-)EnsemblGRCm38mm10GRCm38
MGSCv37681,907,820 - 81,915,943 (-)NCBIGRCm37mm9NCBIm37
MGSCv36681,923,484 - 81,931,607 (-)NCBImm8
Celera683,958,923 - 83,966,967 (-)NCBICelera
Cytogenetic Map6C3NCBI
cM Map635.81NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process
translation  (ISS)

Cellular Component

Molecular Function

References

Additional References at PubMed
PMID:10349636   PMID:10922068   PMID:11042159   PMID:11076861   PMID:12477932   PMID:14610273   PMID:15489334   PMID:16141072   PMID:16141073   PMID:18614015   PMID:21267068   PMID:21873635  
PMID:29091030   PMID:31138677   PMID:32325033   PMID:32987154  


Genomics

Comparative Map Data
Mrpl19
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39681,934,807 - 81,942,930 (-)NCBIGRCm39mm39
GRCm39 Ensembl681,934,832 - 81,942,939 (-)Ensembl
GRCm38681,957,826 - 81,965,949 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl681,957,851 - 81,965,958 (-)EnsemblGRCm38mm10GRCm38
MGSCv37681,907,820 - 81,915,943 (-)NCBIGRCm37mm9NCBIm37
MGSCv36681,923,484 - 81,931,607 (-)NCBImm8
Celera683,958,923 - 83,966,967 (-)NCBICelera
Cytogenetic Map6C3NCBI
cM Map635.81NCBI
MRPL19
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38.p13 Ensembl275,646,783 - 75,690,851 (+)EnsemblGRCh38hg38GRCh38
GRCh38275,646,783 - 75,662,206 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh37275,873,909 - 75,889,332 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 36275,727,417 - 75,742,842 (+)NCBINCBI36hg18NCBI36
Build 34275,785,566 - 75,794,512NCBI
Celera275,705,190 - 75,720,614 (+)NCBI
Cytogenetic Map2p12NCBI
HuRef275,611,713 - 75,627,137 (+)NCBIHuRef
CHM1_1275,803,237 - 75,818,661 (+)NCBICHM1_1
Mrpl19
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mRatBN7.24114,521,824 - 114,526,053 (-)NCBI
Rnor_6.0 Ensembl4112,703,041 - 112,707,270 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_6.04112,703,041 - 112,707,270 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.04177,390,795 - 177,395,024 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.44116,207,542 - 116,211,771 (-)NCBIRGSC3.4rn4RGSC3.4
Celera4103,520,215 - 103,524,444 (-)NCBICelera
Cytogenetic Map4q34NCBI
Mrpl19
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495542410,207,232 - 10,213,642 (-)EnsemblChiLan1.0
ChiLan1.0NW_00495542410,207,091 - 10,213,685 (-)NCBIChiLan1.0ChiLan1.0
MRPL19
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
PanPan1.12A77,221,799 - 77,237,203 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl2A77,221,799 - 77,230,295 (+)Ensemblpanpan1.1panPan2
Mhudiblu_PPA_v02A75,718,330 - 75,733,763 (+)NCBIMhudiblu_PPA_v0panPan3
MRPL19
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1 Ensembl1747,690,228 - 47,696,978 (-)EnsemblCanFam3.1canFam3CanFam3.1
CanFam3.11747,690,239 - 47,696,996 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
Mrpl19
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
SpeTri2.0NW_0049365561,804,821 - 1,814,204 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
MRPL19
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl367,578,565 - 67,611,362 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1367,604,613 - 67,611,323 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2371,096,990 - 71,103,672 (+)NCBISscrofa10.2Sscrofa10.2susScr3
MRPL19
(Chlorocebus sabaeus - African green monkey)
Vervet AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11431,587,069 - 31,595,314 (-)NCBI
Mrpl19
(Heterocephalus glaber - naked mole-rat)
Molerat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_00462474927,702,423 - 27,707,798 (-)NCBI

Position Markers
AW146020  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38681,958,179 - 81,958,324UniSTSGRCm38
MGSCv37681,908,173 - 81,908,318UniSTSGRCm37
Celera683,959,267 - 83,959,412UniSTS
Cytogenetic Map6C3UniSTS
cM Map634.55UniSTS
Whitehead/MRC_RH6844.92UniSTS
RH126592  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38681,961,757 - 81,961,966UniSTSGRCm38
MGSCv37681,911,751 - 81,911,960UniSTSGRCm37
Celera683,962,836 - 83,963,045UniSTS
Cytogenetic Map6C3UniSTS
cM Map634.55UniSTS


QTLs in Region (GRCm38)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
25440480Moaq2_mmodifier of alien QTL 2 (mouse)61117500000Mouse
26884414Bzwq12_mbi-zygomatic width QTL 12, 16 week (mouse)63400000139100000Mouse
1300556Cia6_mcollagen induced arthritis QTL 6 (mouse)Not determined6446488487426034Mouse
4142126W3q3_mweight 3 weeks QTL 3 (mouse)Not determined450382396656149Mouse
4142361W10q11_mweight 10 weeks QTL 11 (mouse)Not determined450382396656149Mouse
4142271Egq8_mearly growth QTL 8 (mouse)Not determined450382396656149Mouse
4142232W6q4_mweight 6 weeks QTL 4 (mouse)Not determined450382396656149Mouse
1558984Cplaq9_mcircadian period of locomotor activity 9 (mouse)Not determined63866962592607450Mouse
1300618Pgia19_mproteoglycan induced arthritis 19 (mouse)Not determined64531405987426034Mouse
10412157Fl1n_mfatty liver 1 in NSY (mouse)Not determined645314059128835032Mouse
4142259Tabw2_mtally ho associated body weight 2 (mouse)Not determined46935985136423692Mouse
25314319Histh6_mhistamine hypersensitivity 6 (mouse)648720000125360000Mouse
25314320Histh5_mhistamine hypersensitivity 5 (mouse)648720000148450000Mouse
1301962Eila2_methanol induced locomotor activity 2 (mouse)Not determined648726556125356785Mouse
1301254Skts11_mskin tumor susceptibility 11 (mouse)Not determined65117915085179300Mouse
1357683Igf1sl1_mIGF-1 serum levels 1 (mouse)Not determined652161713116155267Mouse
4141028Mclr_mmethylcholanthrene lymphoma resistance (mouse)Not determined5437342788379171Mouse
15039373Adip28_madiposity 28 (mouse)65630821190308211Mouse
15039375Bw41_mbody weight QTL 41 (mouse)65630821190308211Mouse
1558977Skmw10_mskeletal muscle weight 10 (mouse)Not determined65844758392447710Mouse
10043972Obq28_mobesity QTL 28 (mouse)Not determined65854043392540433Mouse
1301740Bwq2_mbody weight QTL 2 (mouse)Not determined66005768094057799Mouse
1301369Im4_mimmunoregulatory 4 (mouse)Not determined66348473897484905Mouse
1300650Bw18_mbody weight QTL 18 (mouse)Not determined666713869100714031Mouse
1301876Bits2_mbitterness sensitivity 2 (mouse)Not determined670425898104426034Mouse
1301813Skl3_mskeletal size (tail length) 3 (mouse)Not determined670425898104426034Mouse
1301034Egrm2_mearly growth rate (mouse)Not determined670425898104426034Mouse
4141990Etax6_methanol induced ataxia 6 (mouse)Not determined7132262186275719Mouse
1302020Bbaa20_mB.burgdorferi-associated arthritis 20 (mouse)Not determined67132262193464093Mouse
1300869Stheal5_msoft tissue heal 5 (mouse)Not determined671575060105575178Mouse
1300954Fcsa1_mfemoral cross-sectional area 1 (mouse)Not determined671981024105981170Mouse
1301521Pas1c_mpulmonary adenoma susceptibility 1c (mouse)Not determined671981024105981170Mouse
13506930Recrq9_mrecombination rate in male meiosis QTL 9 (mouse)673500000134700000Mouse
1301320Ots1_movarian teratoma susceptibility 1 (mouse)Not determined675447583104503555Mouse
1301571Arrd1_mage-related retinal degeneration 1 (mouse)Not determined67554435692607450Mouse
1300674Nidd3n_mnon-insulin-dependent diabetes mellitus 3 in NSY (mouse)Not determined67554435694225955Mouse
10412195Efw_mepididymal fat weight (mouse)Not determined67554435694225955Mouse
10043901Pfat5_mpredicted fat percentage 5 (mouse)Not determined675607306109607450Mouse
10412208Cypr4_mcytokine production 4 (mouse)Not determined675716503109716697Mouse
1357875Pfat2_mpredicted fat percentage 2 (mouse)Not determined676463949110464093Mouse
14697704Stsl4_mSalmonella typhimurium susceptibility locus 4 (mouse)67710000090000000Mouse
13824985Alh1_mamplitude of lateral head displacement 1 (mouse)67800000097000000Mouse
4141376Dbm1_mdiabetes modifier 1 (mouse)Not determined678629504121115387Mouse
14696731Pairq1_mP. aeruginosa infection resistance QTL 1 (mouse)681500000102200000Mouse

miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:1901
Count of miRNA genes:800
Interacting mature miRNAs:1068
Transcripts:ENSMUST00000032124, ENSMUST00000128374, ENSMUST00000148025
Prediction methods:Microtar, Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


Expression


Sequence


Reference Sequences
RefSeq Acc Id: ENSMUST00000032124   ⟹   ENSMUSP00000032124
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl681,957,851 - 81,965,958 (-)Ensembl
RefSeq Acc Id: ENSMUST00000128374
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl681,961,974 - 81,962,858 (-)Ensembl
RefSeq Acc Id: ENSMUST00000148025
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl681,962,422 - 81,965,641 (-)Ensembl
RefSeq Acc Id: NM_026490   ⟹   NP_080766
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39681,934,807 - 81,942,930 (-)NCBI
GRCm38681,957,826 - 81,965,949 (-)ENTREZGENE
MGSCv37681,907,820 - 81,915,943 (-)RGD
Celera683,958,923 - 83,966,967 (-)RGD
cM Map6 ENTREZGENE
Sequence:
Reference Sequences
RefSeq Acc Id: NP_080766   ⟸   NM_026490
- UniProtKB: Q9D338 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: ENSMUSP00000032124   ⟸   ENSMUST00000032124

Promoters
RGD ID:6839657
Promoter ID:MM_KWN:46545
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:BoneMarrow_0Hour,   Brain,   Kidney
Transcripts:OTTMUST00000057377
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv36681,912,886 - 81,913,386 (-)MPROMDB
RGD ID:6839655
Promoter ID:MM_KWN:46546
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:3T3L1_Day2,   BoneMarrow_0Hour,   BoneMarrow_2Hour,   BoneMarrow_4Hour,   Brain,   ES_Cell,   Kidney,   Liver,   Lung,   MEF_B4,   Spleen
Transcripts:OTTMUST00000057375,   OTTMUST00000057376
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv36681,915,689 - 81,916,189 (-)MPROMDB
RGD ID:6890084
Promoter ID:EPDNEW_M8493
Type:multiple initiation site
Name:Mrpl19_1
Description:Mus musculus mitochondrial ribosomal protein L19 , mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38681,965,933 - 81,965,993EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:1926274 AgrOrtholog
Ensembl Genes ENSMUSG00000030045 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot
Ensembl Protein ENSMUSP00000032124 ENTREZGENE, UniProtKB/Swiss-Prot
Ensembl Transcript ENSMUST00000032124 ENTREZGENE, UniProtKB/Swiss-Prot
Gene3D-CATH 2.30.30.790 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
InterPro L19_sf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Ribosomal_L19 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Translation_prot_SH3-like_sf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report mmu:56284 UniProtKB/Swiss-Prot
MGD MGI:1926274 ENTREZGENE
NCBI Gene 56284 ENTREZGENE
PANTHER PTHR15680 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam Ribosomal_L19 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen Mrpl19 PhenoGen
PRINTS RIBOSOMALL19 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Superfamily-SCOP SSF50104 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt Q3URF5_MOUSE UniProtKB/TrEMBL
  Q6P8U3_MOUSE UniProtKB/TrEMBL
  Q9D338 ENTREZGENE, UniProtKB/Swiss-Prot
UniProt Secondary Q543I0 UniProtKB/Swiss-Prot
  Q8R1R0 UniProtKB/Swiss-Prot