Sh2d6 (SH2 domain containing 6) - Rat Genome Database

Name: Sh2d6
Creator: Rat Genome Database
License: Creative Commons CC BY 4.0
Keywords: Rat Gene RGD Genome

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Gene: Sh2d6 (SH2 domain containing 6) Mus musculus

Analyze

Symbol:

Sh2d6

Name:

SH2 domain containing 6

RGD ID:

1558250

MGI Page

MGI

Description:

Orthologous to human SH2D6 (SH2 domain containing 6); INTERACTS WITH N-nitrosodiethylamine; silver atom; silver(0).

Type:

protein-coding

RefSeq Status:

VALIDATED

Also known as:

4933424C13Rik; MGC118386; SH2 domain-containing protein 6

RGD Orthologs

Human

Rat

Chinchilla

Bonobo

Dog

Squirrel

Pig

Green Monkey

Naked Mole-Rat

Alliance Genes

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	SH2D6 (SH2 domain containing 6)	HGNC	EggNOG, Ensembl, HGNC, HomoloGene, Inparanoid, NCBI, OrthoDB, OrthoMCL, Panther
Rattus norvegicus (Norway rat):	Sh2d6 (SH2 domain containing 6)	HGNC	EggNOG, OrthoMCL, NCBI, HomoloGene, Panther, OrthoDB, Ensembl
Chinchilla lanigera (long-tailed chinchilla):	Sh2d6 (SH2 domain containing 6)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):	SH2D6 (SH2 domain containing 6)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Canis lupus familiaris (dog):	SH2D6 (SH2 domain containing 6)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):	Sh2d6 (SH2 domain containing 6)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Sus scrofa (pig):	SH2D6 (SH2 domain containing 6)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chlorocebus sabaeus (African green monkey):	SH2D6 (SH2 domain containing 6)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):	Sh2d6 (SH2 domain containing 6)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Other homologs ²
Homo sapiens (human):	BLNK (B cell linker)	HGNC	Treefam
Alliance orthologs ³
Homo sapiens (human):	SH2D6 (SH2 domain containing 6)	Alliance	DIOPT (HGNC\|Hieranoid\|InParanoid\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|Roundup)
Drosophila melanogaster (fruit fly):	CG15529	Alliance	DIOPT (Hieranoid\|OrthoFinder\|OrthoInspector)

Latest Assembly:

GRCm38 - Mouse Genome Assembly GRCm38

Position:

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	6	72,490,624 - 72,511,180 (-)	NCBI	GRCm39		mm39
GRCm39 Ensembl	6	72,490,624 - 72,498,690 (-)	Ensembl
GRCm38	6	72,513,641 - 72,534,206 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	6	72,513,641 - 72,521,707 (-)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	6	72,463,646 - 72,470,644 (-)	NCBI	GRCm37		mm9	NCBIm37
MGSCv36	6	72,443,161 - 72,450,159 (-)	NCBI			mm8
Celera	6	74,611,554 - 74,618,596 (-)	NCBI		Celera
Cytogenetic Map	6	C1	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

4,4'-sulfonyldiphenol (ISO)

atrazine (ISO)

benzo[a]pyrene (ISO)

N-nitrosodiethylamine (EXP)

paracetamol (ISO)

propanal (ISO)

silver atom (EXP)

silver(0) (EXP)

titanium dioxide (ISO)

valproic acid (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

intracellular signal transduction (IBA)

transmembrane receptor protein tyrosine kinase signaling pathway (IBA)

Cellular Component

cytoplasm (IBA)

References

References - curated


1.	Kawai J, etal., Nature. 2001 Feb 8;409(6821):685-90.
2.	Okazaki Y, etal., Nature. 2002 Dec 5;420(6915):563-73.
3.	RGD automated import pipeline for gene-chemical interactions

Additional References at PubMed

PMID:10349636	PMID:11042159	PMID:11076861	PMID:12477932	PMID:16141072	PMID:16141073	PMID:18799693	PMID:21873635	PMID:23375831

Genomics

Comparative Map Data

Sh2d6
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	6	72,490,624 - 72,511,180 (-)	NCBI	GRCm39		mm39
GRCm39 Ensembl	6	72,490,624 - 72,498,690 (-)	Ensembl
GRCm38	6	72,513,641 - 72,534,206 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	6	72,513,641 - 72,521,707 (-)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	6	72,463,646 - 72,470,644 (-)	NCBI	GRCm37		mm9	NCBIm37
MGSCv36	6	72,443,161 - 72,450,159 (-)	NCBI			mm8
Celera	6	74,611,554 - 74,618,596 (-)	NCBI		Celera
Cytogenetic Map	6	C1	NCBI

SH2D6
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38.p13 Ensembl	2	85,418,931 - 85,437,029 (+)	Ensembl	GRCh38		hg38	GRCh38
GRCh38	2	85,418,931 - 85,437,029 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh37	2	85,646,054 - 85,664,152 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	2	85,515,429 - 85,517,663 (+)	NCBI	NCBI36		hg18	NCBI36
Celera	2	85,490,191 - 85,492,425 (+)	NCBI
Cytogenetic Map	2	p11.2	NCBI
HuRef	2	85,558,713 - 85,560,947 (+)	NCBI		HuRef
CHM1_1	2	85,575,805 - 85,593,903 (+)	NCBI		CHM1_1

Sh2d6
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
mRatBN7.2	4	104,566,210 - 104,574,176 (-)	NCBI
Rnor_6.0	4	100,373,808 - 100,382,209 (-)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_5.0	4	165,144,159 - 165,152,087 (-)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	4	105,816,758 - 105,824,421 (-)	NCBI	RGSC3.4		rn4	RGSC3.4
Celera	4	93,718,196 - 93,726,597 (-)	NCBI		Celera
Cytogenetic Map	4	q31	NCBI

Sh2d6
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955424	2,039,973 - 2,045,353 (-)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955424	2,040,012 - 2,047,142 (-)	NCBI	ChiLan1.0	ChiLan1.0

SH2D6
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
PanPan1.1	2A	87,021,922 - 87,039,657 (+)	NCBI	panpan1.1	PanPan1.1	panPan2
Mhudiblu_PPA_v0	2A	85,482,199 - 85,489,284 (+)	NCBI	Mhudiblu_PPA_v0		panPan3

SH2D6
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1 Ensembl	17	39,603,322 - 39,604,862 (-)	Ensembl	CanFam3.1		canFam3	CanFam3.1
CanFam3.1	17	39,599,865 - 39,611,189 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1

Sh2d6
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
SpeTri2.0	NW_004936712	1,770,565 - 1,778,584 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

SH2D6
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1	3	59,319,980 - 59,327,058 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	3	62,397,827 - 62,405,075 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

SH2D6
(Chlorocebus sabaeus - African green monkey)

Vervet Assembly	Chr	Position (strand)	Source	Genome Browsers
Vervet Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	14	21,719,462 - 21,734,456 (-)	NCBI

Sh2d6
(Heterocephalus glaber - naked mole-rat)

Molerat Assembly	Chr	Position (strand)	Source	Genome Browsers
Molerat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla 1.0	NW_004624749	17,707,508 - 17,729,432 (-)	NCBI

QTLs in Region (GRCm38)

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
1301876	Bits2_m	bitterness sensitivity 2 (mouse)			Not determined		6	70425898	104426034	Mouse
1301813	Skl3_m	skeletal size (tail length) 3 (mouse)			Not determined		6	70425898	104426034	Mouse
1300954	Fcsa1_m	femoral cross-sectional area 1 (mouse)			Not determined		6	71981024	105981170	Mouse
1558984	Cplaq9_m	circadian period of locomotor activity 9 (mouse)			Not determined		6	38669625	92607450	Mouse
25440480	Moaq2_m	modifier of alien QTL 2 (mouse)					6	1	117500000	Mouse
10043972	Obq28_m	obesity QTL 28 (mouse)			Not determined		6	58540433	92540433	Mouse
12910802	Pwbwq12_m	post-weaning body weight QTL 12 (mouse)					6	43826813	77811523	Mouse
25314319	Histh6_m	histamine hypersensitivity 6 (mouse)					6	48720000	125360000	Mouse
12910785	Pwgrq16_m	post-weaning growth rate QTL 16 (mouse)					6	43826813	77811523	Mouse
13208564	Bmiq7_m	body mass index QTL 7 (mouse)					6	25000000	80000000	Mouse
4141990	Etax6_m	ethanol induced ataxia 6 (mouse)			Not determined			71322621	86275719	Mouse
4142361	W10q11_m	weight 10 weeks QTL 11 (mouse)			Not determined			4503823	96656149	Mouse
4142271	Egq8_m	early growth QTL 8 (mouse)			Not determined			4503823	96656149	Mouse
1301369	Im4_m	immunoregulatory 4 (mouse)			Not determined		6	63484738	97484905	Mouse
1300618	Pgia19_m	proteoglycan induced arthritis 19 (mouse)			Not determined		6	45314059	87426034	Mouse
12910807	Pwbwq11_m	post-weaning body weight QTL 11 (mouse)					6	43826813	77811523	Mouse
1300650	Bw18_m	body weight QTL 18 (mouse)			Not determined		6	66713869	100714031	Mouse
1302020	Bbaa20_m	B.burgdorferi-associated arthritis 20 (mouse)			Not determined		6	71322621	93464093	Mouse
1301740	Bwq2_m	body weight QTL 2 (mouse)			Not determined		6	60057680	94057799	Mouse
26884441	Sklq3_m	skull length QTL 3, 5 week (mouse)					6	7600000	80600000	Mouse
12910820	Ogrq3_m	overall growth rate QTL 3 (mouse)					6	43826813	77811523	Mouse
1357442	Dbts1_m	diabetes 1 (mouse)			Not determined		6	18234148	73387692	Mouse
4140983	Srilp_m	sleep response to influenza, light phase (mouse)			Not determined			48726556	75447710	Mouse
15039373	Adip28_m	adiposity 28 (mouse)					6	56308211	90308211	Mouse
15039375	Bw41_m	body weight QTL 41 (mouse)					6	56308211	90308211	Mouse
1357683	Igf1sl1_m	IGF-1 serum levels 1 (mouse)			Not determined		6	52161713	116155267	Mouse
4141782	Mrdq5_m	modifier of retinal degeneration QTL 5 (mouse)			Not determined			32850650	78238974	Mouse
4142259	Tabw2_m	tally ho associated body weight 2 (mouse)			Not determined			46935985	136423692	Mouse
4141028	Mclr_m	methylcholanthrene lymphoma resistance (mouse)			Not determined			54373427	88379171	Mouse
1301034	Egrm2_m	early growth rate (mouse)			Not determined		6	70425898	104426034	Mouse
1300869	Stheal5_m	soft tissue heal 5 (mouse)			Not determined		6	71575060	105575178	Mouse
11040601	Lmr4a_m	leishmaniasis resistance 4a (mouse)					6	42116373	76116515	Mouse
4142232	W6q4_m	weight 6 weeks QTL 4 (mouse)			Not determined			4503823	96656149	Mouse
11040600	Lmr4c_m	leishmaniasis resistance 4c (mouse)					6	42116373	76116515	Mouse
26884414	Bzwq12_m	bi-zygomatic width QTL 12, 16 week (mouse)					6	3400000	139100000	Mouse
1300556	Cia6_m	collagen induced arthritis QTL 6 (mouse)			Not determined		6	4464884	87426034	Mouse
1558977	Skmw10_m	skeletal muscle weight 10 (mouse)			Not determined		6	58447583	92447710	Mouse
12880424	V25Dq4_m	vitamin D inactive form serum level QTL 4 (mouse)					6	41600000	75600000	Mouse
11533915	Mts4_m	mammary tumor susceptibility 4 (mouse)					6	42116373	76116515	Mouse
1301266	Lmr4_m	leishmaniasis resistance 4 (mouse)			Not determined		6	42116373	76116515	Mouse
12910798	Pwgrq5_m	pre-weaning growth rate QTL 5 (mouse)					6	43826813	77811523	Mouse
4142126	W3q3_m	weight 3 weeks QTL 3 (mouse)			Not determined			4503823	96656149	Mouse
1301521	Pas1c_m	pulmonary adenoma susceptibility 1c (mouse)			Not determined		6	71981024	105981170	Mouse
25314320	Histh5_m	histamine hypersensitivity 5 (mouse)					6	48720000	148450000	Mouse
1301254	Skts11_m	skin tumor susceptibility 11 (mouse)			Not determined		6	51179150	85179300	Mouse
10412157	Fl1n_m	fatty liver 1 in NSY (mouse)			Not determined		6	45314059	128835032	Mouse
12910809	Pwbwq10_m	post-weaning body weight QTL 10 (mouse)					6	43826813	77811523	Mouse
1301962	Eila2_m	ethanol induced locomotor activity 2 (mouse)			Not determined		6	48726556	125356785	Mouse

miRNA Target Status

Predicted Target Of

	Summary Value
Count of predictions:	1556
Count of miRNA genes:	585
Interacting mature miRNAs:	696
Transcripts:	ENSMUST00000089687, ENSMUST00000159577, ENSMUST00000159877, ENSMUST00000160123, ENSMUST00000160761, ENSMUST00000162561, ENSMUST00000163451
Prediction methods:	Microtar, Miranda, Rnahybrid, Targetscan
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

Expression

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_001374030	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006506834	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_011241544	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_011241546	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_011241547	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_011241549	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_036152305	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_355785	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_004933622	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AC154002	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK016886	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BC100525	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Reference Sequences

RefSeq Acc Id:

ENSMUST00000089687 ⟹ ENSMUSP00000087117

RefSeq Status:

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm38.p6 Ensembl	6	72,513,654 - 72,520,538 (-)	Ensembl

RefSeq Acc Id:

ENSMUST00000159577 ⟹ ENSMUSP00000157033

RefSeq Status:

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm38.p6 Ensembl	6	72,513,656 - 72,520,015 (-)	Ensembl

RefSeq Acc Id:

ENSMUST00000159877 ⟹ ENSMUSP00000123776

RefSeq Status:

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm38.p6 Ensembl	6	72,513,652 - 72,520,650 (-)	Ensembl

RefSeq Acc Id:

ENSMUST00000160123 ⟹ ENSMUSP00000157091

RefSeq Status:

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm38.p6 Ensembl	6	72,513,644 - 72,520,036 (-)	Ensembl

RefSeq Acc Id:

ENSMUST00000160761 ⟹ ENSMUSP00000157201

RefSeq Status:

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm38.p6 Ensembl	6	72,513,652 - 72,521,689 (-)	Ensembl

RefSeq Acc Id:

ENSMUST00000162561 ⟹ ENSMUSP00000124673

RefSeq Status:

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm38.p6 Ensembl	6	72,513,641 - 72,520,627 (-)	Ensembl

RefSeq Acc Id:

ENSMUST00000234038 ⟹ ENSMUSP00000157110

RefSeq Status:

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm38.p6 Ensembl	6	72,513,645 - 72,520,036 (-)	Ensembl

RefSeq Acc Id:

ENSMUST00000234220 ⟹ ENSMUSP00000157185

RefSeq Status:

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm38.p6 Ensembl	6	72,513,652 - 72,520,617 (-)	Ensembl

RefSeq Acc Id:

ENSMUST00000234615 ⟹ ENSMUSP00000157379

RefSeq Status:

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm38.p6 Ensembl	6	72,513,652 - 72,521,707 (-)	Ensembl

RefSeq Acc Id:

ENSMUST00000235004 ⟹ ENSMUSP00000157366

RefSeq Status:

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm38.p6 Ensembl	6	72,513,649 - 72,520,036 (-)	Ensembl

RefSeq Acc Id:

NM_001374030 ⟹ NP_001360959

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39	6	72,490,624 - 72,497,019 (-)	NCBI
GRCm38	6	72,513,641 - 72,520,036 (-)	NCBI

RefSeq Acc Id:

XM_006506834 ⟹ XP_006506897

RefSeq Status:

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39	6	72,490,624 - 72,497,008 (-)	NCBI
GRCm38	6	72,513,641 - 72,520,027 (-)	NCBI

Sequence:

show sequence

GGAGACGGAGCTGTTAAGAAGCCAATAAATCGTTCTGGGCCCCTGGATCCATCCAAGCCACCAC
TGCCCCCGCCTCAGTCTACCATGGCCAGAGGACTCCCCATAAACCCTTCCTTCCCTACCCGCCC
TACCTCTGGCTACCATTTCCCGCTGAAGACAGCAATGAACCCACAGCCTGCAAAGCAGGGACCT
GTTTTTGGAAGGCAAGGGCGAGGTACATCTGCTAGAATGGTAACAAAGAAACCAGATGAGGACA
TCTACCTGGAGTGTGAGCCGGATCCAGTTCCAGTCTTGACTAGGTCTCTGAGCTCCAAAGCCCT
GATACCTCCAGTTCCTCTGCCAAGAACATCTGGATTGCCCAAGTCAGTGGCTGGTTACCAGGAG
GCTCGGAATGGAGCTATGGATGGTGCGTTGAAAGCAGGAAGGAGGCTGTCTGCTTCCTCCATAG
CCCCTGCTCTGAGTAGCTCTGTTGCTGAGAATGGTAGTCTGCTGGGTCAGCCTTGGTACTCTGG
AAACTGTGACCGTCAGTCTGTTGAGAGAGCCCTGCTTCACTTCCAAAAGGATGGGGCCTACACG
GTGCGCCTCAGCTCTGGGCCTCACAGTTCCCAGCCCTTCACTTTGGCAGTACTCCTCAGAGGCC
GTGTCTTCAACATTCCCATCCGGCAACTGGACGGTGGGCACCACTATGCCCTGGGTCGGGAGGG
CAGGAATCATGAGGAGCTCTTCTCCTCTGTGGCCGCCATGGTTCAGCATTACACGAAGCACCCC
CTGCCCCTTGTGGACGGACACAGTGGCAACCGGGGACTCACCTACCTGCGCTTCCCCACCAAGC
CCTGAAGAAACAGCAGCACACAGATCCCCCTCAGGCACGTGATGTGTGCCCCATTCACTTTCTC
TCCCACTTTAGGCTGTTTTCTTTTCCCTGCCTTCCTCCACCCCAAAAGCTCTGCAGGTTCAAAC
TGAGAGGCATGAAGATGGCCACCTGGGAGGCTGGCTTCCTCAGAGACACTGCCTCTCCTTAGAC
TGACTTCTTGTGTGTGGTTTGCATCTTCTGGGAGGAACTAGGTTCCCAGCACACAGTATACTTT
CAATAAACATTTACTGACTGAATTCTCTCTTAA

hide sequence

RefSeq Acc Id:

XM_011241544 ⟹ XP_011239846

RefSeq Status:

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39	6	72,490,624 - 72,509,576 (-)	NCBI
GRCm38	6	72,513,641 - 72,533,165 (-)	NCBI

Sequence:

show sequence

TGGGGTGGGGGAGAATAATAGCATCCCCCCCCCGAAGATAAACAGGAGAGGGGGATACCGGGGA
GTGAGAAAGGTTGGTTAAAGTAATCTGGAGAAGACAGTCTTCAGTTTTCTGTGTTTACCAAGGG
GACTGTTGTCCGCAGGTAAATGGAACGGCAGACAGGACATGGTACCTTCCCTATAGGCCTAGTG
GTCGGTGATGGGCAGGAGAGTACCAAGATATGGGCCTTCCAGGGAGACCAAGGCTTGCAGAGCT
GAGGGCTTTCCATAGAGTGAGTAACCACTAGCTATGCCTTACAGGAGATAACAGCCAGGAGCCT
GCCATGTGCCAAGTTGTGAGCTAGGTGCTAGGTGTAGGGTTTGGCTGTGAACCCTACAGAAACC
AGGGCTGCCATTTATAGAGCTTACTTCAGCACCCTGGAGGCGGTACAGTCTAGCTCTGGAACAA
GCCTGTGAGCTTAATTACCATGGAAGCCTTGAGCGTAGGGGTTGGGGGGCTGCTGAAGGAAGTT
CTTCTGAGCTGTGGCCCGAAGGAAGAGAGGACAAGACAGAGCATCCCAGGGAAAGAATGGCCAG
TGGGCAGCCCCAGAGTTTCACTGTGGAGGTCTGTGCCTGTCCTGGAATTCAGTATGTGGTCTCA
TCGTCTCACTCAAAGCCTGCCTCAAACTCACAGAGATCTACCTGCCTCTGCCTCCCAAGTGCTG
GGATTAAAGGACAGGTTCAGTGGCAGCAAGGCCCGGTTGGGGCCACCACTCCTTCCTGCCAGAG
GTGCAGATACCCAAGTTTGGAGAGAAAGTAGAGCCAACCCATCTTTCCTGTCTGGCCCAGAGAC
CTGGAGAAACAGGCATCCCTTTTTGAAGGCCCAGGAAGAGGGAGAAGAGGAGGATAAATATGAG
CTGCCCCCCTGTGAGGTTCTGCCCGTCAGTCTGGCCCCTGCACAGTCTCTTGGCTCTAAAGACG
ACTCCTTGTATCTGGATCGTTCTGGGCCCCTGGATCCATCCAAGCCACCACTGCCCCCGCCTCA
GTCTACCATGGCCAGAGGACTCCCCATAAACCCTTCCTTCCCTACCCGCCCTACCTCTGGCTAC
CATTTCCCGCTGAAGACAGCAATGAACCCACAGCCTGCAAAGCAGGGACCTGTTTTTGGAAGGC
AAGGGCGAGGTACATCTGCTAGAATGGTAACAAAGAAACCAGATGAGGACATCTACCTGGAGTG
TGAGCCGGATCCAGTTCCAGTCTTGACTAGGTCTCTGAGCTCCAAAGCCCTGATACCTCCAGTT
CCTCTGCCAAGAACATCTGGATTGCCCAAGTCAGTGGCTGGTTACCAGGAGGCTCGGAATGGAG
CTATGGATGGTGCGTTGAAAGCAGGAAGGAGGCTGTCTGCTTCCTCCATAGCCCCTGCTCTGAG
TAGCTCTGTTGCTGAGGATGGGGCCTACACGGTGCGCCTCAGCTCTGGGCCTCACAGTTCCCAG
CCCTTCACTTTGGCAGTACTCCTCAGAGGCCGTGTCTTCAACATTCCCATCCGGCAACTGGACG
GTGGGCACCACTATGCCCTGGGTCGGGAGGGCAGGAATCATGAGGAGCTCTTCTCCTCTGTGGC
CGCCATGGTTCAGCATTACACGAAGCACCCCCTGCCCCTTGTGGACGGACACAGTGGCAACCGG
GGACTCACCTACCTGCGCTTCCCCACCAAGCCCTGAAGAAACAGCAGCACACAGATCCCCCTCA
GGCACGTGATGTGTGCCCCATTCACTTTCTCTCCCACTTTAGGCTGTTTTCTTTTCCCTGCCTT
CCTCCACCCCAAAAGCTCTGCAGGTTCAAACTGAGAGGCATGAAGATGGCCACCTGGGAGGCTG
GCTTCCTCAGAGACACTGCCTCTCCTTAGACTGACTTCTTGTGTGTGGTTTGCATCTTCTGGGA
GGAACTAGGTTCCCAGCACACAGTATACTTTCAATAAACATTTACTGACTGAATTCTCTCTTAA

hide sequence

RefSeq Acc Id:

XM_011241546 ⟹ XP_011239848

RefSeq Status:

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39	6	72,490,624 - 72,499,475 (-)	NCBI
GRCm38	6	72,513,641 - 72,522,484 (-)	NCBI

Sequence:

show sequence

GGGAGTCCAGTGAGGAAACGATACTTGTAAGGTCTGACTGCTTTCTGTAGCATTTCTGTCTGGA
TGTCTGAAGCAGTGCCTTAGTTTCACTGTGGAGGTCTGTGCCTGTCCTGGAATTCAGTATGTGG
TCTCATCGTCTCACTCAAAGCCTGCCTCAAACTCACAGAGATCTACCTGCCTCTGCCTCCCAAG
TGCTGGGATTAAAGGACAGGTTCAGTGGCAGCAAGGCCCGGTTGGGGCCACCACTCCTTCCTGC
CAGAGGTGCAGATACCCAAGTTTGGAGAGAAAGTAGAGCCAACCCATCTTTCCTGTCTGGCCCA
GAGACCTGGAGAAACAGGCATCCCTTTTTGAAGGCCCAGGAAGAGGGAGAAGAGGAGGATAAAT
ATGAGCTGCCCCCCTGTGAGGTTCTGCCCGTCAGTCTGGCCCCTGCACAGTCTCTTGGCTCTAA
AGACGACTCCTTGTATCTGGATCGTTCTGGGCCCCTGGATCCATCCAAGCCACCACTGCCCCCG
CCTCAGTCTACCATGGCCAGAGGACTCCCCATAAACCCTTCCTTCCCTACCCGCCCTACCTCTG
GCTACCATTTCCCGCTGAAGACAGCAATGAACCCACAGCCTGCAAAGCAGGGACCTGTTTTTGG
AAGGCAAGGGCGAGGTACATCTGCTAGAATGGTAACAAAGAAACCAGATGAGGACATCTACCTG
GAGTGTGAGCCGGATCCAGTTCCAGTCTTGACTAGGTCTCTGAGCTCCAAAGCCCTGATACCTC
CAGTTCCTCTGCCAAGAACATCTGGATTGCCCAAGTCAGTGGCTGGTTACCAGGAGGCTCGGAA
TGGAGCTATGGATGGTGCGTTGAAAGCAGGAAGGAGGCTGTCTGCTTCCTCCATAGCCCCTGCT
CTGAGTAGCTCTGTTGCTGAGAATGGTAGTCTGCTGGGTCAGCCTTGGTACTCTGGAAACTGTG
ACCGTCAGTCTGTTGAGAGAGCCCTGCTTCACTTCCAAAAGGATGGGGCCTACACGGTGCGCCT
CAGCTCTGGGCCTCACAGTTCCCAGCCCTTCACTTTGGCAGTACTCCTCAGAGGCCGTGTCTTC
AACATTCCCATCCGGCAACTGGACGGTGGGCACCACTATGCCCTGGGTCGGGAGGGCAGGAATC
ATGAGGAGCTCTTCTCCTCTGTGGCCGCCATGGTTCAGCATTACACGAAGCACCCCCTGCCCCT
TGTGGACGGACACAGTGGCAACCGGGGACTCACCTACCTGCGCTTCCCCACCAAGCCCTGAAGA
AACAGCAGCACACAGATCCCCCTCAGGCACGTGATGTGTGCCCCATTCACTTTCTCTCCCACTT
TAGGCTGTTTTCTTTTCCCTGCCTTCCTCCACCCCAAAAGCTCTGCAGGTTCAAACTGAGAGGC
ATGAAGATGGCCACCTGGGAGGCTGGCTTCCTCAGAGACACTGCCTCTCCTTAGACTGACTTCT
TGTGTGTGGTTTGCATCTTCTGGGAGGAACTAGGTTCCCAGCACACAGTATACTTTCAATAAAC
ATTTACTGACTGAATTCTCTCTTAA

hide sequence

RefSeq Acc Id:

XM_011241547 ⟹ XP_011239849

RefSeq Status:

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39	6	72,490,624 - 72,511,180 (-)	NCBI
GRCm38	6	72,513,641 - 72,534,206 (-)	NCBI

Sequence:

show sequence

CGAGGCCCAGCATCTGTGTTCATCTGTGGCAGAGTGATTTCAGGACCCTCCATGCCTGTGGAGG
AAGGATGTGGGTTGGAGAAGCATCCTTGACCCACTGTGTCTGGGGTCTCGTAAGGAGAAGGGGA
GAAAGTCAGAGTTTCACTGTGGAGGTCTGTGCCTGTCCTGGAATTCAGTATGTGGTCTCATCGT
CTCACTCAAAGCCTGCCTCAAACTCACAGAGATCTACCTGCCTCTGCCTCCCAAGTGCTGGGAT
TAAAGGACAGGTTCAGTGGCAGCAAGGCCCGGTTGGGGCCACCACTCCTTCCTGCCAGAGGTGC
AGATACCCAAGTTTGGAGAGAAAGTAGAGCCAACCCATCTTTCCTGTCTGGCCCAGAGACCTGG
AGAAACAGGCATCCCTTTTTGAAGGCCCAGGAAGAGGGAGAAGAGGAGGATAAATATGAGCTGC
CCCCCTGTGAGGTTCTGCCCGTCAGTCTGGCCCCTGCACAGTCTCTTGGCTCTAAAGACGACTC
CTTGTATCTGGATCGTTCTGGGCCCCTGGATCCATCCAAGCCACCACTGCCCCCGCCTCAGTCT
ACCATGGCCAGAGGACTCCCCATAAACCCTTCCTTCCCTACCCGCCCTACCTCTGGCTACCATT
TCCCGCTGAAGACAGCAATGAACCCACAGCCTGCAAAGCAGGGACCTGTTTTTGGAAGGCAAGG
GCGAGGTACATCTGCTAGAATGGTAACAAAGAAACCAGATGAGGACATCTACCTGGAGTGTGAG
CCGGATCCAGTTCCAGTCTTGACTAGGTCTCTGAGCTCCAAAGCCCTGATACCTCCAGTTCCTC
TGCCAAGAACATCTGGATTGCCCAAGTCAGTGGCTGGTTACCAGGAGGCTCGGAATGGAGCTAT
GGATGGTGCGTTGAAAGCAGGAAGGAGGCTGTCTGCTTCCTCCATAGCCCCTGCTCTGAGTAGC
TCTGTTGCTGAGAATGGTAGTCTGCTGGGTCAGCCTTGGTACTCTGGAAACTGTGACCGTCAGT
CTGTTGAGAGAGCCCTGCTTCACTTCCAAAAGGATGGGGCCTACACGGTGCGCCTCAGCTCTGG
GCCTCACAGTTCCCAGCCCTTCACTTTGGCAGTACTCCTCAGAGGCCGTGTCTTCAACATTCCC
ATCCGGCAACTGGACGGTGGGCACCACTATGCCCTGGGTCGGGAGGGCAGGAATCATGAGGAGC
TCTTCTCCTCTGTGGCCGCCATGGTTCAGCATTACACGAAGCACCCCCTGCCCCTTGTGGACGG
ACACAGTGGCAACCGGGGACTCACCTACCTGCGCTTCCCCACCAAGCCCTGAAGAAACAGCAGC
ACACAGATCCCCCTCAGGCACGTGATGTGTGCCCCATTCACTTTCTCTCCCACTTTAGGCTGTT
TTCTTTTCCCTGCCTTCCTCCACCCCAAAAGCTCTGCAGGTTCAAACTGAGAGGCATGAAGATG
GCCACCTGGGAGGCTGGCTTCCTCAGAGACACTGCCTCTCCTTAGACTGACTTCTTGTGTGTGG
TTTGCATCTTCTGGGAGGAACTAGGTTCCCAGCACACAGTATACTTTCAATAAACATTTACTGA
CTGAATTCTCTCTTAA

hide sequence

RefSeq Acc Id:

XM_011241549 ⟹ XP_011239851

RefSeq Status:

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39	6	72,492,209 - 72,510,150 (-)	NCBI
GRCm38	6	72,515,306 - 72,533,178 (-)	NCBI

Sequence:

show sequence

AGTGCCTGGAAAGTGGGGTGGGGGAGAATAATAGCATCCCCCCCCCGAAGATAAACAGGAGAGG
GGGATACCGGGGAGTGAGAAAGGTTGGTTAAAGTAATCTGGAGAAGACAGTCTTCAGTTTTCTG
TGTTTACCAAGGGGACTGTTGTCCGCAGGTAAATGGAACGGCAGACAGGACATGGTACCTTCCC
TATAGGCCTAGTGGTCGGTGATGGGCAGGAGAGTACCAAGATATGGGCCTTCCAGGGAGACCAA
GGCTTGCAGAGCTGAGGGCTTTCCATAGAGTGAGTAACCACTAGCTATGCCTTACAGGAGATAA
CAGCCAGGAGCCTGCCATGTGCCAAGTTGTGAGCTAGGTGCTAGGTGTAGGGTTTGGCTGTGAA
CCCTACAGAAACCAGGGCTGCCATTTATAGAGCTTACTTCAGCACCCTGGAGGCGGTACAGTCT
AGCTCTGGAACAAGCCTGTGAGCTTAATTACCATGGAAGCCTTGAGCGTAGGGGTTGGGGGGCT
GCTGAAGGAAGTTCTTCTGAGCTGTGGCCCGAAGGAAGAGAGGACAAGACAGAGCATCCCAGGG
AAAGAATGGCCAGTGGGCAGCCCCAGAGTTTCACTGTGGAGGTCTGTGCCTGTCCTGGAATTCA
GTATGTGGTCTCATCGTCTCACTCAAAGCCTGCCTCAAACTCACAGAGATCTACCTGCCTCTGC
CTCCCAAGTGCTGGGATTAAAGGACAGGTTCAGTGGCAGCAAGGCCCGGTTGGGGCCACCACTC
CTTCCTGCCAGAGGTGCAGATACCCAAGTTTGGAGAGAAAGTAGAGCCAACCCATCTTTCCTGT
CTGGCCCAGAGACCTGGAGAAACAGGCATCCCTTTTTGAAGGCCCAGGAAGAGGGAGAAGAGGA
GGATAAATATGAGCTGCCCCCCTGTGAGGTTCTGCCCGTCAGTCTGGCCCCTGCACAGTCTCTT
GGCTCTAAAGACGACTCCTTGTATCTGGATCGTTCTGGGCCCCTGGATCCATCCAAGCCACCAC
TGCCCCCGCCTCAGTCTACCATGGCCAGAGGACTCCCCATAAACCCTTCCTTCCCTACCCGCCC
TACCTCTGGCTACCATTTCCCGCTGAAGACAGCAATGAACCCACAGCCTGCAAAGCAGGGACCT
GTTTTTGGAAGGCAAGGGCGAGGTACATCTGCTAGAATGGTAACAAAGAAACCAGATGAGGACA
TCTACCTGGAGTGTGAGCCGGATCCAGTTCCAGTCTTGACTAGGTCTCTGAGCTCCAAAGCCCT
GATACCTCCAGTTCCTCTGCCAAGAACATCTGGATTGCCCAAGTCAGTGGCTGGTTACCAGGAG
GCTCGGAATCAGGAAGGAGGCTGTCTGCTTCCTCCATAGCCCCTGCTCTGAGTAGCTCTGTTGC
TGAGGATGGGGCCTACACGGTGCGCCTCAGCTCTGGGCCTCACAGTTCCCAGCCCTTCACTTTG
GCAGTACTCCTCAGAGGCC

hide sequence

RefSeq Acc Id:

XM_036152305 ⟹ XP_036008198

RefSeq Status:

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39	6	72,492,525 - 72,510,149 (-)	NCBI

RefSeq Acc Id:

XM_355785 ⟹ XP_355785

RefSeq Status:

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39	6	72,490,624 - 72,498,701 (-)	NCBI
GRCm38	6	72,513,641 - 72,521,722 (-)	NCBI
MGSCv37	6	72,463,646 - 72,470,644 (-)	RGD
cM Map	6		ENTREZGENE

Sequence:

show sequence

AGCTCCTGGGCTCTAGAGAGGCAAAGGGGCTCCGCTCACCTACCTTGCCATGGACAGGTTCAGT
GGCAGCAAGGCCCGGTTGGGGCCACCACTCCTTCCTGCCAGAGGTGCAGATACCCAAGTTTGGA
GAGAAAGTAGAGCCAACCCATCTTTCCTGTCTGGCCCAGAGACCTGGAGAAACAGGCATCCCTT
TTTGAAGGCCCAGGAAGAGGGAGAAGAGGAGGATAAATATGAGCTGCCCCCCTGTGAGGTTCTG
CCCGTCAGTCTGGCCCCTGCACAGTCTCTTGGCTCTAAAGACGACTCCTTGTATCTGGATCGTT
CTGGGCCCCTGGATCCATCCAAGCCACCACTGCCCCCGCCTCAGTCTACCATGGCCAGAGGACT
CCCCATAAACCCTTCCTTCCCTACCCGCCCTACCTCTGGCTACCATTTCCCGCTGAAGACAGCA
ATGAACCCACAGCCTGCAAAGCAGGGACCTGTTTTTGGAAGGCAAGGGCGAGGTACATCTGCTA
GAATGGTAACAAAGAAACCAGATGAGGACATCTACCTGGAGTGTGAGCCGGATCCAGTTCCAGT
CTTGACTAGGTCTCTGAGCTCCAAAGCCCTGATACCTCCAGTTCCTCTGCCAAGAACATCTGGA
TTGCCCAAGTCAGTGGCTGGTTACCAGGAGGCTCGGAATGGAGCTATGGATGGTGCGTTGAAAG
CAGGAAGGAGGCTGTCTGCTTCCTCCATAGCCCCTGCTCTGAGTAGCTCTGTTGCTGAGAATGG
TAGTCTGCTGGGTCAGCCTTGGTACTCTGGAAACTGTGACCGTCAGTCTGTTGAGAGAGCCCTG
CTTCACTTCCAAAAGGATGGGGCCTACACGGTGCGCCTCAGCTCTGGGCCTCACAGTTCCCAGC
CCTTCACTTTGGCAGTACTCCTCAGAGGCCGTGTCTTCAACATTCCCATCCGGCAACTGGACGG
TGGGCACCACTATGCCCTGGGTCGGGAGGGCAGGAATCATGAGGAGCTCTTCTCCTCTGTGGCC
GCCATGGTTCAGCATTACACGAAGCACCCCCTGCCCCTTGTGGACGGACACAGTGGCAACCGGG
GACTCACCTACCTGCGCTTCCCCACCAAGCCCTGAAGAAACAGCAGCACACAGATCCCCCTCAG
GCACGTGATGTGTGCCCCATTCACTTTCTCTCCCACTTTAGGCTGTTTTCTTTTCCCTGCCTTC
CTCCACCCCAAAAGCTCTGCAGGTTCAAACTGAGAGGCATGAAGATGGCCACCTGGGAGGCTGG
CTTCCTCAGAGACACTGCCTCTCCTTAGACTGACTTCTTGTGTGTGGTTTGCATCTTCTGGGAG
GAACTAGGTTCCCAGCACACAGTATACTTTCAATAAACATTTACTGACTGAATTCTCTCTTAA

hide sequence

RefSeq Acc Id:

XR_004933622

RefSeq Status:

Type:

NON-CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39	6	72,494,090 - 72,499,272 (-)	NCBI

Protein Sequences


Protein RefSeqs	NP_001360959	(Get FASTA)	NCBI Sequence Viewer
	XP_006506897	(Get FASTA)	NCBI Sequence Viewer
	XP_011239846	(Get FASTA)	NCBI Sequence Viewer
	XP_011239848	(Get FASTA)	NCBI Sequence Viewer
	XP_011239849	(Get FASTA)	NCBI Sequence Viewer
	XP_011239851	(Get FASTA)	NCBI Sequence Viewer
	XP_036008198	(Get FASTA)	NCBI Sequence Viewer
	XP_355785	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	AAI00526	(Get FASTA)	NCBI Sequence Viewer
	BAB30480	(Get FASTA)	NCBI Sequence Viewer
	Q9D413	(Get FASTA)	NCBI Sequence Viewer

Reference Sequences

RefSeq Acc Id:

XP_355785 ⟸ XM_355785

- Peptide Label:

isoform X3

- Sequence:

show sequence

MDRFSGSKARLGPPLLPARGADTQVWRESRANPSFLSGPETWRNRHPFLKAQEEGEEEDKYELP
PCEVLPVSLAPAQSLGSKDDSLYLDRSGPLDPSKPPLPPPQSTMARGLPINPSFPTRPTSGYHF
PLKTAMNPQPAKQGPVFGRQGRGTSARMVTKKPDEDIYLECEPDPVPVLTRSLSSKALIPPVPL
PRTSGLPKSVAGYQEARNGAMDGALKAGRRLSASSIAPALSSSVAENGSLLGQPWYSGNCDRQS
VERALLHFQKDGAYTVRLSSGPHSSQPFTLAVLLRGRVFNIPIRQLDGGHHYALGREGRNHEEL
FSSVAAMVQHYTKHPLPLVDGHSGNRGLTYLRFPTKP

hide sequence

RefSeq Acc Id:	XP_006506897 ⟸ XM_006506834
- Peptide Label:	isoform X5
- UniProtKB:	E0CYY5 (UniProtKB/TrEMBL)
- Sequence:	show sequence MARGLPINPSFPTRPTSGYHFPLKTAMNPQPAKQGPVFGRQGRGTSARMVTKKPDEDIYLECEP DPVPVLTRSLSSKALIPPVPLPRTSGLPKSVAGYQEARNGAMDGALKAGRRLSASSIAPALSSS VAENGSLLGQPWYSGNCDRQSVERALLHFQKDGAYTVRLSSGPHSSQPFTLAVLLRGRVFNIPI RQLDGGHHYALGREGRNHEELFSSVAAMVQHYTKHPLPLVDGHSGNRGLTYLRFPTKP hide sequence

RefSeq Acc Id:

XP_011239849 ⟸ XM_011241547

- Peptide Label:

isoform X2

- Sequence:

show sequence

MWSHRLTQSLPQTHRDLPASASQVLGLKDRFSGSKARLGPPLLPARGADTQVWRESRANPSFLS
GPETWRNRHPFLKAQEEGEEEDKYELPPCEVLPVSLAPAQSLGSKDDSLYLDRSGPLDPSKPPL
PPPQSTMARGLPINPSFPTRPTSGYHFPLKTAMNPQPAKQGPVFGRQGRGTSARMVTKKPDEDI
YLECEPDPVPVLTRSLSSKALIPPVPLPRTSGLPKSVAGYQEARNGAMDGALKAGRRLSASSIA
PALSSSVAENGSLLGQPWYSGNCDRQSVERALLHFQKDGAYTVRLSSGPHSSQPFTLAVLLRGR
VFNIPIRQLDGGHHYALGREGRNHEELFSSVAAMVQHYTKHPLPLVDGHSGNRGLTYLRFPTKP

hide sequence

RefSeq Acc Id:

XP_011239846 ⟸ XM_011241544

- Peptide Label:

isoform X1

- Sequence:

show sequence

MEALSVGVGGLLKEVLLSCGPKEERTRQSIPGKEWPVGSPRVSLWRSVPVLEFSMWSHRLTQSL
PQTHRDLPASASQVLGLKDRFSGSKARLGPPLLPARGADTQVWRESRANPSFLSGPETWRNRHP
FLKAQEEGEEEDKYELPPCEVLPVSLAPAQSLGSKDDSLYLDRSGPLDPSKPPLPPPQSTMARG
LPINPSFPTRPTSGYHFPLKTAMNPQPAKQGPVFGRQGRGTSARMVTKKPDEDIYLECEPDPVP
VLTRSLSSKALIPPVPLPRTSGLPKSVAGYQEARNGAMDGALKAGRRLSASSIAPALSSSVAED
GAYTVRLSSGPHSSQPFTLAVLLRGRVFNIPIRQLDGGHHYALGREGRNHEELFSSVAAMVQHY
TKHPLPLVDGHSGNRGLTYLRFPTKP

hide sequence

RefSeq Acc Id:

XP_011239848 ⟸ XM_011241546

- Peptide Label:

isoform X2

- Sequence:

show sequence

MWSHRLTQSLPQTHRDLPASASQVLGLKDRFSGSKARLGPPLLPARGADTQVWRESRANPSFLS
GPETWRNRHPFLKAQEEGEEEDKYELPPCEVLPVSLAPAQSLGSKDDSLYLDRSGPLDPSKPPL
PPPQSTMARGLPINPSFPTRPTSGYHFPLKTAMNPQPAKQGPVFGRQGRGTSARMVTKKPDEDI
YLECEPDPVPVLTRSLSSKALIPPVPLPRTSGLPKSVAGYQEARNGAMDGALKAGRRLSASSIA
PALSSSVAENGSLLGQPWYSGNCDRQSVERALLHFQKDGAYTVRLSSGPHSSQPFTLAVLLRGR
VFNIPIRQLDGGHHYALGREGRNHEELFSSVAAMVQHYTKHPLPLVDGHSGNRGLTYLRFPTKP

hide sequence

RefSeq Acc Id:

XP_011239851 ⟸ XM_011241549

- Peptide Label:

isoform X4

- Sequence:

show sequence

MEALSVGVGGLLKEVLLSCGPKEERTRQSIPGKEWPVGSPRVSLWRSVPVLEFSMWSHRLTQSL
PQTHRDLPASASQVLGLKDRFSGSKARLGPPLLPARGADTQVWRESRANPSFLSGPETWRNRHP
FLKAQEEGEEEDKYELPPCEVLPVSLAPAQSLGSKDDSLYLDRSGPLDPSKPPLPPPQSTMARG
LPINPSFPTRPTSGYHFPLKTAMNPQPAKQGPVFGRQGRGTSARMVTKKPDEDIYLECEPDPVP
VLTRSLSSKALIPPVPLPRTSGLPKSVAGYQEARNQEGGCLLPP

hide sequence

RefSeq Acc Id:

NP_001360959 ⟸ NM_001374030

RefSeq Acc Id:

ENSMUSP00000123776 ⟸ ENSMUST00000159877

RefSeq Acc Id:

ENSMUSP00000157033 ⟸ ENSMUST00000159577

RefSeq Acc Id:

ENSMUSP00000157091 ⟸ ENSMUST00000160123

RefSeq Acc Id:

ENSMUSP00000157201 ⟸ ENSMUST00000160761

RefSeq Acc Id:

ENSMUSP00000087117 ⟸ ENSMUST00000089687

RefSeq Acc Id:

ENSMUSP00000124673 ⟸ ENSMUST00000162561

RefSeq Acc Id:

ENSMUSP00000157366 ⟸ ENSMUST00000235004

RefSeq Acc Id:

ENSMUSP00000157379 ⟸ ENSMUST00000234615

RefSeq Acc Id:

ENSMUSP00000157185 ⟸ ENSMUST00000234220

RefSeq Acc Id:

ENSMUSP00000157110 ⟸ ENSMUST00000234038

RefSeq Acc Id:	XP_036008198 ⟸ XM_036152305
- Peptide Label:	isoform X4

Protein Domains

SH2

Promoters

RGD ID:

6890022

Promoter ID:

EPDNEW_M8462

Type:

initiation region

Name:

Sh2d6_1

SO ACC ID:

SO:0000170

Source:

EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)

Experiment Methods:

Single-end sequencing.

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm38	6	72,520,637 - 72,520,697	EPDNEW

Additional Information

External Database Links

Database	Acc Id	Source(s)
AGR Gene	MGI:1918380	AgrOrtholog
Ensembl Genes	ENSMUSG00000052631	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Protein	ENSMUSP00000087117	UniProtKB/TrEMBL
	ENSMUSP00000123776	ENTREZGENE, UniProtKB/TrEMBL
	ENSMUSP00000124673	UniProtKB/TrEMBL
	ENSMUSP00000157033	UniProtKB/TrEMBL
	ENSMUSP00000157091	UniProtKB/TrEMBL
	ENSMUSP00000157110	ENTREZGENE, UniProtKB/TrEMBL
	ENSMUSP00000157185	UniProtKB/TrEMBL
	ENSMUSP00000157201	UniProtKB/TrEMBL
	ENSMUSP00000157366	UniProtKB/TrEMBL
	ENSMUSP00000157379	ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSMUST00000089687	UniProtKB/TrEMBL
	ENSMUST00000159577	UniProtKB/TrEMBL
	ENSMUST00000159877	UniProtKB/TrEMBL
	ENSMUST00000160123	UniProtKB/TrEMBL
	ENSMUST00000160761	UniProtKB/TrEMBL
	ENSMUST00000162561	UniProtKB/TrEMBL
	ENSMUST00000234038	ENTREZGENE, UniProtKB/TrEMBL
	ENSMUST00000234220	UniProtKB/TrEMBL
	ENSMUST00000234615	UniProtKB/TrEMBL
	ENSMUST00000235004	UniProtKB/TrEMBL
Gene3D-CATH	3.30.505.10	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
InterPro	SH2	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	SH2_dom_sf	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
MGD	MGI:1918380	ENTREZGENE
NCBI Gene	71130	ENTREZGENE
Pfam	SH2	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen	Sh2d6	PhenoGen
PRINTS	SH2DOMAIN	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PROSITE	SH2	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
SMART	SH2	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Superfamily-SCOP	SSF55550	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt	A0A3Q4EBW9_MOUSE	UniProtKB/TrEMBL
	A0A3Q4ECA8_MOUSE	UniProtKB/TrEMBL
	A0A3Q4EG63_MOUSE	UniProtKB/TrEMBL
	A0A3Q4EGG3_MOUSE	UniProtKB/TrEMBL
	A0A3Q4EGW3_MOUSE	UniProtKB/TrEMBL
	E0CYY5	ENTREZGENE, UniProtKB/TrEMBL
	E9QJU1_MOUSE	UniProtKB/TrEMBL
	Q9D413	ENTREZGENE, UniProtKB/Swiss-Prot
UniProt Secondary	E2QRQ0	UniProtKB/TrEMBL
	Q497J3	UniProtKB/Swiss-Prot

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)