Sertad4 (SERTA domain containing 4)

Gene: Sertad4 (SERTA domain containing 4) Mus musculus

Analyze

Symbol:

Sertad4

Name:

SERTA domain containing 4

RGD ID:

1558164

MGI Page

MGI

Description:

Predicted to be located in nucleus. Is expressed in brain. Orthologous to human SERTAD4 (SERTA domain containing 4).

Type:

protein-coding

RefSeq Status:

VALIDATED

Previously known as:

4833404A09; C130018M11Rik; SERTA domain-containing protein 4

RGD Orthologs

Alliance Genes

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	SERTAD4 (SERTA domain containing 4)	HGNC	EggNOG, Ensembl, HGNC, HomoloGene, Inparanoid, NCBI, OrthoDB, OrthoMCL, Panther, PhylomeDB, Treefam
Rattus norvegicus (Norway rat):	Sertad4 (SERTA domain containing 4)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chinchilla lanigera (long-tailed chinchilla):	Sertad4 (SERTA domain containing 4)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):	SERTAD4 (SERTA domain containing 4)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Canis lupus familiaris (dog):	SERTAD4 (SERTA domain containing 4)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):	Sertad4 (SERTA domain containing 4)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Sus scrofa (pig):	SERTAD4 (SERTA domain containing 4)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):	SERTAD4 (SERTA domain containing 4)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):	Sertad4 (SERTA domain containing 4)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Alliance orthologs ³
Homo sapiens (human):	SERTAD4 (SERTA domain containing 4)	Alliance	DIOPT (Ensembl Compara\|HGNC\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Rattus norvegicus (Norway rat):	Sertad4 (SERTA domain containing 4)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Danio rerio (zebrafish):	sertad4 (SERTA domain containing 4)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid\|ZFIN)
Xenopus tropicalis (tropical clawed frog):	sertad4	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)

Latest Assembly:

GRCm39 - Mouse Genome Assembly GRCm39

Position:

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	1	192,526,796 - 192,538,060 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	1	192,526,796 - 192,538,064 (-)	Ensembl		GRCm39 Ensembl
GRCm38	1	192,844,469 - 192,855,752 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	1	192,844,488 - 192,855,756 (-)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	1	194,670,682 - 194,681,946 (-)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	1	194,545,212 - 194,556,445 (-)	NCBI		MGSCv36	mm8
Celera	1	199,726,389 - 199,737,652 (-)	NCBI		Celera
Cytogenetic Map	1	H6	NCBI
cM Map	1	97.55	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

gastrointestinal stromal tumor (ISO)

genetic disease (ISO)

parathyroid carcinoma (ISO)

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

(S)-nicotine (EXP)

1,2-dimethylhydrazine (EXP)

17beta-estradiol (ISO)

2,2',5,5'-tetrachlorobiphenyl (ISO)

2,3,7,8-tetrachlorodibenzodioxine (EXP)

3,3',5,5'-tetrabromobisphenol A (EXP)

3,4-methylenedioxymethamphetamine (ISO)

4,4'-sulfonyldiphenol (EXP)

5-aza-2'-deoxycytidine (ISO)

acrylamide (ISO)

aflatoxin B1 (ISO)

all-trans-retinoic acid (ISO)

arsane (ISO)

arsenic atom (ISO)

atrazine (ISO)

benzo[a]pyrene (ISO)

bis(2-ethylhexyl) phthalate (ISO)

bisphenol A (EXP,ISO)

bisphenol F (EXP)

cadmium atom (ISO)

cannabidiol (ISO)

chlorpyrifos (EXP)

cisplatin (ISO)

cobalt atom (EXP)

dioxygen (EXP)

diuron (ISO)

dorsomorphin (ISO)

entinostat (ISO)

ethanol (EXP)

ethylparaben (ISO)

fulvestrant (ISO)

hydrogen peroxide (ISO)

morphine (EXP)

nickel atom (ISO)

niclosamide (ISO)

nicotine (EXP)

ozone (EXP)

paracetamol (EXP,ISO)

perfluorohexanesulfonic acid (ISO)

perfluorooctane-1-sulfonic acid (ISO)

perfluorooctanoic acid (ISO)

progesterone (ISO)

SB 431542 (ISO)

silver atom (ISO)

silver(0) (ISO)

sodium dodecyl sulfate (ISO)

tamoxifen (EXP)

tetrachloromethane (EXP)

trichostatin A (ISO)

triclosan (ISO)

valproic acid (EXP,ISO)

vorinostat (ISO)

zinc sulfate (ISO)

zoledronic acid (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

biological_process (ND)

Cellular Component

cellular_component (ND)

nucleus (IEA)

Molecular Function

molecular_function (ND)

protein binding (ISO)

References

References - curated

#	Reference Title	Reference Citation
1.	Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs.	Okazaki Y, etal., Nature. 2002 Dec 5;420(6915):563-73.
2.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions

Additional References at PubMed

PMID:8889548	PMID:10349636	PMID:11042159	PMID:11076861	PMID:11217851	PMID:12477932	PMID:16141072	PMID:16141073	PMID:18725516	PMID:20368287	PMID:21677750

Genomics

Comparative Map Data

Sertad4
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	1	192,526,796 - 192,538,060 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	1	192,526,796 - 192,538,064 (-)	Ensembl		GRCm39 Ensembl
GRCm38	1	192,844,469 - 192,855,752 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	1	192,844,488 - 192,855,756 (-)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	1	194,670,682 - 194,681,946 (-)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	1	194,545,212 - 194,556,445 (-)	NCBI		MGSCv36	mm8
Celera	1	199,726,389 - 199,737,652 (-)	NCBI		Celera
Cytogenetic Map	1	H6	NCBI
cM Map	1	97.55	NCBI

SERTAD4
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	1	210,232,796 - 210,246,631 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	1	210,232,796 - 210,246,631 (+)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	1	210,406,141 - 210,419,976 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	1	208,472,818 - 208,483,083 (+)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	1	206,794,589 - 206,804,833	NCBI
Celera	1	183,629,578 - 183,639,844 (+)	NCBI		Celera
Cytogenetic Map	1	q32.2	NCBI
HuRef	1	181,079,983 - 181,090,160 (+)	NCBI		HuRef
CHM1_1	1	211,678,522 - 211,688,788 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	1	209,471,480 - 209,485,315 (+)	NCBI		T2T-CHM13v2.0

Sertad4
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	13	106,889,019 - 106,899,777 (-)	NCBI		GRCr8
mRatBN7.2	13	104,360,307 - 104,371,064 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	13	104,360,307 - 104,370,546 (-)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	13	106,877,959 - 106,888,198 (-)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	13	108,261,816 - 108,272,055 (-)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	13	105,479,767 - 105,490,006 (-)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	13	111,574,545 - 111,585,113 (-)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	13	111,574,609 - 111,581,019 (-)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	13	116,126,511 - 116,136,873 (-)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	13	108,739,942 - 108,750,295 (-)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
Celera	13	103,790,786 - 103,801,020 (-)	NCBI		Celera
Cytogenetic Map	13	q27	NCBI

Sertad4
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955489	1,947,045 - 1,953,970 (-)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955489	1,947,819 - 1,958,434 (-)	NCBI	ChiLan1.0	ChiLan1.0

SERTAD4
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	1	39,168,286 - 39,181,958 (-)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	1	39,134,527 - 39,148,088 (-)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	1	185,789,513 - 185,803,679 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	1	190,663,690 - 190,672,669 (+)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	1	190,663,690 - 190,672,666 (+)	Ensembl	panpan1.1		panPan2

SERTAD4
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	7	8,856,298 - 8,862,280 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	7	8,856,330 - 8,860,526 (+)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	7	8,434,005 - 8,445,065 (+)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	7	8,552,165 - 8,563,192 (+)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	7	8,551,640 - 8,562,943 (+)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	7	8,481,124 - 8,492,152 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	7	8,577,879 - 8,588,924 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	7	8,714,991 - 8,726,067 (+)	NCBI		UU_Cfam_GSD_1.0

Sertad4
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024409344	65,648,427 - 65,655,846 (-)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936557	2,888,473 - 2,895,492 (-)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936557	2,888,574 - 2,895,867 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

SERTAD4
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	9	132,737,299 - 132,748,448 (-)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	9	132,737,291 - 132,748,443 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	9	145,772,676 - 145,783,649 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

SERTAD4
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	25	19,224,996 - 19,238,427 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	25	19,224,806 - 19,233,425 (-)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666055	19,787,524 - 19,800,998 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Sertad4
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla 1.0	NW_004624807	1,751,506 - 1,760,634 (-)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Variants

Variants in Sertad4
429 total Variants

miRNA Target Status

Predicted Target Of

	Summary Value
Count of predictions:	1624
Count of miRNA genes:	585
Interacting mature miRNAs:	720
Transcripts:	ENSMUST00000016406, ENSMUST00000125391, ENSMUST00000155503, ENSMUST00000155579
Prediction methods:	Miranda, Rnahybrid, Targetscan
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

QTLs in Region (GRCm39)

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
12880426	V25Dq2_m	vitamin D inactive form serum level QTL 2 (mouse)					1	172532197	195154279	Mouse
1301339	Hdlq15_m	HDL QTL 15 (mouse)			Not determined		1	165873675	195154279	Mouse
1558802	Skmw6_m	skeletal muscle weight 6 (mouse)			Not determined		1	167954584	195154279	Mouse
1301132	Mors1_m	modifier of obesity related sterility 1 (mouse)			Not determined		1	170379500	195154279	Mouse
1301596	Elnt_m	escape latencies during navigation task (mouse)			Not determined		1	162145207	194111528	Mouse
1302158	Fembrs5_m	femur breaking strength 5 (mouse)			Not determined		1	167462514	195154279	Mouse
1301251	Scc3_m	colon tumor susceptibility 3 (mouse)			Not determined		1	168213823	195154279	Mouse
1300727	Mptp1_m	MPTP sensitivity 1 (mouse)			Not determined		1	171632048	192681050	Mouse
1302023	Orch4_m	autoimmune orchitis resistance 4 (mouse)			Not determined		1	175211318	195154279	Mouse
1300823	Ath9_m	atherosclerosis 9 (mouse)			Not determined		1	160112768	194112883	Mouse
11049575	Lmr8b_m	leishmaniasis resistance 8b (mouse)					1	172303451	195154279	Mouse
12880429	V25Dq1_m	vitamin D inactive form serum level QTL 1 (mouse)					1	172632197	195154279	Mouse
1301652	Cpfd2_m	cerebellum pattern fissures (mouse)			Not determined		1	172303451	195154279	Mouse
1559024	Zit1_m	zinc induced tolerance 1 (mouse)			Not determined		1	167462514	195154279	Mouse
1301431	Pcho1_m	plasma cholesterol 1 (mouse)			Not determined		1	159262573	193262693	Mouse
4141483	Femwf7_m	femur work to failure 7 (mouse)			Not determined			167462514	195154279	Mouse
10043863	Swrl5_m	SWR lupus locus 5 (mouse)			Not determined		1	172303451	195154279	Mouse
12790988	Phdlc5_m	plasma HDL cholesterol 5 (mouse)					9	160097157	194097157	Mouse
11039528	Ccc3_m	colitis susceptibility in the Collaborative Cross 3 (mouse)					1	3680142	195051546	Mouse
12790987	Tgl5_m	triglyceride 5 (mouse)					1	160097157	194097157	Mouse
11532690	Sluc37_m	susceptibility to lung cancer 37 (mouse)					1	175468817	194111528	Mouse
1301632	Bw8q1_m	body weight at 8 weeks QTL 1 (mouse)			Not determined		1	161201261	195154279	Mouse
1357732	Tbbmd1_m	total body bone mineral density 1 (mouse)			Not determined		1	171983110	195154279	Mouse

Markers in Region

AI851948

Mouse Assembly	Chr	Position (strand)	Source	JBrowse
GRCm38	1	192,844,755 - 192,844,846	UniSTS	GRCm38
MGSCv37	1	194,670,949 - 194,671,040	UniSTS	GRCm37
Celera	1	199,726,656 - 199,726,747	UniSTS
Cytogenetic Map	1	H6	UniSTS
Whitehead/MRC_RH	1	2445.75	UniSTS

Expression

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_001177794	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_198247	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006497248	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017319739	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AK029355	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK047877	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AL365326	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BC060251	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BQ174721	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BX514346	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CH466555	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

RefSeq Acc Id:

ENSMUST00000016406 ⟹ ENSMUSP00000016406

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	1	192,526,797 - 192,534,055 (-)	Ensembl
GRCm38.p6 Ensembl	1	192,844,489 - 192,851,747 (-)	Ensembl

RefSeq Acc Id:

ENSMUST00000125391

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	1	192,536,510 - 192,537,794 (-)	Ensembl
GRCm38.p6 Ensembl	1	192,854,202 - 192,855,486 (-)	Ensembl

RefSeq Acc Id:

ENSMUST00000155503 ⟹ ENSMUSP00000142132

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	1	192,529,371 - 192,534,055 (-)	Ensembl
GRCm38.p6 Ensembl	1	192,847,063 - 192,851,747 (-)	Ensembl

RefSeq Acc Id:

ENSMUST00000155579 ⟹ ENSMUSP00000116176

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	1	192,526,796 - 192,538,064 (-)	Ensembl
GRCm38.p6 Ensembl	1	192,844,488 - 192,855,756 (-)	Ensembl

RefSeq Acc Id:

NM_001177794 ⟹ NP_001171265

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39	1	192,526,796 - 192,534,055 (-)	NCBI
GRCm38	1	192,844,488 - 192,851,747 (-)	NCBI
MGSCv37	1	194,670,682 - 194,681,946 (-)	RGD
Celera	1	199,726,389 - 199,737,652 (-)	RGD
cM Map	1		ENTREZGENE

Sequence:

show sequence

CAGGGCTGTGGAAACAACTACCGAGTGTCTGTCAGCCTCACCCTGGGAGGAGAGAATCTAAGGC
TGTTAGAGATGACGCTGGTTCTGTCCATGAATAGATTCTGCGAGCCCATTGTCTCAGAAGGAGC
TGCTGAGATTGCCGGGTACCAAACACTATGGGAGGCTGACAGCTACGGAGGTGCGAGCCCCCCA
GGGCCAGCTCCAGTTCCTTCTCAGGGAGACCGGGGAGCCAGCTCACACCTGGCAGGATCACATT
ACAGGGGAATTCCAAATCCTATAAGCACACCCAAGGTCACATACTTCAAGAGGAAGTATGCAGA
AGACGAGGATCTTCACCCACCACTCAGCAGCTGCAGCCATAAAACCATCTCCATTTTCGAGGAG
CGAGCACACATCCTTTACATGTCCTTGGAGAAGCTCAGGTTCATCGATGACCCAGAAGTGTACC
TGCGAAGGTCTGTTCTGATCAACAACCTGATGAAGAGGATCCACGGGGAGATTGTCATGCAGAA
CAGCTGGTGCCTCCCTGCCTGCTCCCTCGGTGGCACCCCCGCCCAAGAGTGGTTCCTGGCTCAA
GACTGTCCTTACCGGAAACGGCCCCGGGTGGCCAAAGAGGAGTGGGAAAAGATCCACACTTGCT
GTTTTTATCAGGAGTGTGGTGGTCACTGCCTGAACCTACCCCTCTCTGTCAATACAAGTGTTGG
AAGCACCTCGGCCGCCGCTGTGGCCTCGGCTGCCTCTTCCTCTTCCTCCCCATCCACCTCTTCT
TCATCCTCCCCATCCTCATCCTCCTCTCCCTCTCCCTCTCCCTCTTCCTCCTCCTCCTCCTCCT
CCTCTTCCCCTCTGCCTTTGCCTAGTTGCTCCCACCATGTGGACTTTGACATAGGCAGTGCACC
TATTTACAAGAGCCAAATACCCGCCAGCGAAATCTTTGTCACTAACATTAGGTCGCTTGGTGTC
CAGGAAAAGGTCAAATTCAACAATGATGGGAAAGTAAGTCACGAAACCAGCAGAGATGGTGATG
CCCTCGGCCAAGAACCTGTGGGGAACGACCTTGATTTTGAGTGCAAAGGCCAATTTTACGATTA
TTTTGAGACTGGATATAATGAGAGAAACCGTGTGAGTGAGTCTTGGAAAAAGTCTTTGAGGAAA
AAGGAGCTTTCTCCGAGCAGCAAACTGTGCTGCAACAGAGGGGGTAAAATGTGATGCCCCCCAC
TGGCGCGGAAGCACGCACAGCATGATCAGTTTTTACTTTGGATTTTGTAGTTTTGTACAACAGA
TAAAATCATGCAGTGAACACCACGCCGGGTTGTCTCATTGCCTGGAGATCAGATTGCACAAAAC
ATCTGTACAGTAGGCATCTGCAAGCCACTTATTCATGTGATTTTTTGCCAAGGAAAGCCAACTT
CATGTTTCAAAGTATACCTTAGTTTTCTTTTCTTTTTCTTTTTTCTTTTCTTTTTTTTTTGTAA
AAAAAAATCAGTAGAATAGATAGAAGAAAACATGCCCTCGTTATATTCCCACTGCCCCTCCAAG
GAACCTGCGCTAGCCAAATGCAACATGTTTGCCAGTTAATTAGGTAGTTACTTGGTAAACAAAT
CAATATAACCAGCAGAGGTGCCTGCTTCGATGTGATGCAGTATTTTTCTTTCCTGAGTAAAAGA
CTGGAGACAGGAAGCTAGATGAAGTGGTTTCATGAGCTGTGTCATGTTTGTACTGGACAGGTTG
GGGCAAAATGAAGCGCACCTGGCAAGACAGCAATCTAGGATCTGTGGAGACAGTTCCCCACAAG
CTCCTTGCTTGCCTGTGATGGGTAGTGGGTGGCTAGAGAGGTGGCATACAGAGCCACCTCTGAT
GGGGTGATGATAGAGAGGTGGCACATACAGAGCCATCTTTGATGGGGTGGCTAGAGAGGTGGTG
TACAGAGCCATCTCTGATAGGGTCATAGGGAGGTGGCATGCAAAGCCATCTTTGATGGGGTGGC
TAGAGAGGTGGCGTTCAGGGCCATCTTAGTGATGGGGTGATAGGTGGCATACAGGGCCATCTTG
GGTGCCTTACTTTATCTTAATTTTTGCCAGTGTGAAAATTAAGGATGAATCAGAGTTACAGCAG
GGATTTGACAAAACACAGGGTGGATCCATGCAGTTTGGAAACTTAACTTTGAACGATCGCGTTC
AACTTTCGAGTTACCCTCCCCCTTTTTCCTTTGTTTGTGACGCCCAGTGGCTGTGGGTCTGATA
TTTTTGGGTAGAGATGGAGAAGACAATGGGGAAGGCCATCAGGCACAGAGAAGGCTGCCTTGGT
TCTCCATGGCAACGAGCAGTTGCTTGGTCTGGGCTCTCCCAGCTTTGGGCTGTTTTGTTTCCTT
ATCCAGTGACATTCACAGCCCGTGGCATGCGTTATATTTTGACCTGTTTTTGCATCATTTCATG
CGTTTAGACTCTTAAGAGCATGTGGTTTCTATATATGACTTTTGCTGTTGATTGAGAAGCACAA
TGTTAATAGAGTACGTGGTGATCAATATGTTTTATCTTAAAGAATGTAAAGGTTTGTAGGTTGC
GGAACGTTATTTTGGAGAAATGGGGCTCGCTTGTCATAGATATTGTGTATTTGGCCAACACACT
ACTCAACAATACCTTGGATTTGCACATTGGCAAGTGTACTCAGTGGGACTCGGAACGCCCCCAC
CAGCTCCTAATGAGCTACTCCAATCTCCAAGGCCAAGGATTGGTCTGGGTGACTTGGGTCTCTT
AAAACAATTATTTACAGGAACCAAATGCCAAAAGGAAGAAATAGGTAAGTTCTCCCACTTTCTC
CAAGATGAAGCTTTTTAATTATTGCTATTAATATTAAATAGGTCTCATTCATACAGTGTATGAG
TAGATCATTTGGGCAATTGTCCACAAGGACCAATTTTTAAAAGATGTTCCTGTGTTATGGCTGA
ATAGTCTAGTAATGTCTCGTCCTTTATTTTCAATATTTGATGAACATTTTGGTGTTGAAAACTT
AGCTGATAGATGCTTGTACATGACTTGTGTTGTAATATAGTGAGGTTTTCTTGATATATATTTA
TTAAAATGATCAAAATTCAAAAAAAAAAAAAAAAAA

hide sequence

RefSeq Acc Id:

NM_198247 ⟹ NP_937890

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39	1	192,526,796 - 192,538,060 (-)	NCBI
GRCm38	1	192,844,488 - 192,855,752 (-)	NCBI
MGSCv37	1	194,670,682 - 194,681,946 (-)	RGD
Celera	1	199,726,389 - 199,737,652 (-)	RGD
cM Map	1		ENTREZGENE

Sequence:

show sequence

GGCGCGGCGCCCCGCGATCTGGCAGAGCGGAGGGAGGCGGGGAGCGCGCTTGTCAGGTTCCCTC
TCGCCCCGGGGGCATCCAGCAGAGCCAGGCTCGGAAATCCGCGGGGAAATGGCAAACAGGATTG
ACGGGTTTCTCGCGCTCCTCGCCAGACACATCGGCTCATTTCCATAACCGTCTGCGGCGGCGGC
GGCGGGACCTGCGGGGACCTCGGCCGCCGCGTACCCGGCCACGCCGACTGGGCCCGGGAGGCGC
GTGGGCAGCGGCGGCCGCGCGGAGGACGGCGGCGGCTGGAGCGCGGGGCGCGCGATCTAAGGCT
GTTAGAGATGACGCTGGTTCTGTCCATGAATAGATTCTGCGAGCCCATTGTCTCAGAAGGAGCT
GCTGAGATTGCCGGGTACCAAACACTATGGGAGGCTGACAGCTACGGAGGTGCGAGCCCCCCAG
GGCCAGCTCCAGTTCCTTCTCAGGGAGACCGGGGAGCCAGCTCACACCTGGCAGGATCACATTA
CAGGGGAATTCCAAATCCTATAAGCACACCCAAGGTCACATACTTCAAGAGGAAGTATGCAGAA
GACGAGGATCTTCACCCACCACTCAGCAGCTGCAGCCATAAAACCATCTCCATTTTCGAGGAGC
GAGCACACATCCTTTACATGTCCTTGGAGAAGCTCAGGTTCATCGATGACCCAGAAGTGTACCT
GCGAAGGTCTGTTCTGATCAACAACCTGATGAAGAGGATCCACGGGGAGATTGTCATGCAGAAC
AGCTGGTGCCTCCCTGCCTGCTCCCTCGGTGGCACCCCCGCCCAAGAGTGGTTCCTGGCTCAAG
ACTGTCCTTACCGGAAACGGCCCCGGGTGGCCAAAGAGGAGTGGGAAAAGATCCACACTTGCTG
TTTTTATCAGGAGTGTGGTGGTCACTGCCTGAACCTACCCCTCTCTGTCAATACAAGTGTTGGA
AGCACCTCGGCCGCCGCTGTGGCCTCGGCTGCCTCTTCCTCTTCCTCCCCATCCACCTCTTCTT
CATCCTCCCCATCCTCATCCTCCTCTCCCTCTCCCTCTCCCTCTTCCTCCTCCTCCTCCTCCTC
CTCTTCCCCTCTGCCTTTGCCTAGTTGCTCCCACCATGTGGACTTTGACATAGGCAGTGCACCT
ATTTACAAGAGCCAAATACCCGCCAGCGAAATCTTTGTCACTAACATTAGGTCGCTTGGTGTCC
AGGAAAAGGTCAAATTCAACAATGATGGGAAAGTAAGTCACGAAACCAGCAGAGATGGTGATGC
CCTCGGCCAAGAACCTGTGGGGAACGACCTTGATTTTGAGTGCAAAGGCCAATTTTACGATTAT
TTTGAGACTGGATATAATGAGAGAAACCGTGTGAGTGAGTCTTGGAAAAAGTCTTTGAGGAAAA
AGGAGCTTTCTCCGAGCAGCAAACTGTGCTGCAACAGAGGGGGTAAAATGTGATGCCCCCCACT
GGCGCGGAAGCACGCACAGCATGATCAGTTTTTACTTTGGATTTTGTAGTTTTGTACAACAGAT
AAAATCATGCAGTGAACACCACGCCGGGTTGTCTCATTGCCTGGAGATCAGATTGCACAAAACA
TCTGTACAGTAGGCATCTGCAAGCCACTTATTCATGTGATTTTTTGCCAAGGAAAGCCAACTTC
ATGTTTCAAAGTATACCTTAGTTTTCTTTTCTTTTTCTTTTTTCTTTTCTTTTTTTTTTGTAAA
AAAAAATCAGTAGAATAGATAGAAGAAAACATGCCCTCGTTATATTCCCACTGCCCCTCCAAGG
AACCTGCGCTAGCCAAATGCAACATGTTTGCCAGTTAATTAGGTAGTTACTTGGTAAACAAATC
AATATAACCAGCAGAGGTGCCTGCTTCGATGTGATGCAGTATTTTTCTTTCCTGAGTAAAAGAC
TGGAGACAGGAAGCTAGATGAAGTGGTTTCATGAGCTGTGTCATGTTTGTACTGGACAGGTTGG
GGCAAAATGAAGCGCACCTGGCAAGACAGCAATCTAGGATCTGTGGAGACAGTTCCCCACAAGC
TCCTTGCTTGCCTGTGATGGGTAGTGGGTGGCTAGAGAGGTGGCATACAGAGCCACCTCTGATG
GGGTGATGATAGAGAGGTGGCACATACAGAGCCATCTTTGATGGGGTGGCTAGAGAGGTGGTGT
ACAGAGCCATCTCTGATAGGGTCATAGGGAGGTGGCATGCAAAGCCATCTTTGATGGGGTGGCT
AGAGAGGTGGCGTTCAGGGCCATCTTAGTGATGGGGTGATAGGTGGCATACAGGGCCATCTTGG
GTGCCTTACTTTATCTTAATTTTTGCCAGTGTGAAAATTAAGGATGAATCAGAGTTACAGCAGG
GATTTGACAAAACACAGGGTGGATCCATGCAGTTTGGAAACTTAACTTTGAACGATCGCGTTCA
ACTTTCGAGTTACCCTCCCCCTTTTTCCTTTGTTTGTGACGCCCAGTGGCTGTGGGTCTGATAT
TTTTGGGTAGAGATGGAGAAGACAATGGGGAAGGCCATCAGGCACAGAGAAGGCTGCCTTGGTT
CTCCATGGCAACGAGCAGTTGCTTGGTCTGGGCTCTCCCAGCTTTGGGCTGTTTTGTTTCCTTA
TCCAGTGACATTCACAGCCCGTGGCATGCGTTATATTTTGACCTGTTTTTGCATCATTTCATGC
GTTTAGACTCTTAAGAGCATGTGGTTTCTATATATGACTTTTGCTGTTGATTGAGAAGCACAAT
GTTAATAGAGTACGTGGTGATCAATATGTTTTATCTTAAAGAATGTAAAGGTTTGTAGGTTGCG
GAACGTTATTTTGGAGAAATGGGGCTCGCTTGTCATAGATATTGTGTATTTGGCCAACACACTA
CTCAACAATACCTTGGATTTGCACATTGGCAAGTGTACTCAGTGGGACTCGGAACGCCCCCACC
AGCTCCTAATGAGCTACTCCAATCTCCAAGGCCAAGGATTGGTCTGGGTGACTTGGGTCTCTTA
AAACAATTATTTACAGGAACCAAATGCCAAAAGGAAGAAATAGGTAAGTTCTCCCACTTTCTCC
AAGATGAAGCTTTTTAATTATTGCTATTAATATTAAATAGGTCTCATTCATACAGTGTATGAGT
AGATCATTTGGGCAATTGTCCACAAGGACCAATTTTTAAAAGATGTTCCTGTGTTATGGCTGAA
TAGTCTAGTAATGTCTCGTCCTTTATTTTCAATATTTGATGAACATTTTGGTGTTGAAAACTTA
GCTGATAGATGCTTGTACATGACTTGTGTTGTAATATAGTGAGGTTTTCTTGATATATATTTAT
TAAAATGATCAAAATTCAAAAAAAAAAAAAAAAAAA

hide sequence

RefSeq Acc Id:

XM_006497248 ⟹ XP_006497311

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39	1	192,526,796 - 192,537,389 (-)	NCBI
GRCm38	1	192,844,469 - 192,855,025 (-)	NCBI

Sequence:

show sequence

CACCTCCCCGCGGGCTGCCAGGCCCACGCCCCCGCCTCTAGCAGTCTCCTCGGCCCCGCAACTT
TCCCGAGTGCCGGGCCGCAGGAGCGGGGCACCAAGGTCCACCCCTAGCTCCAGCGGCGCGTACC
GCGCGGGCGGCAGCAGCTCGGCGAAGGACCAGGGCAGCTGCGGGCTGGAGTGTGGCCCCGCCAG
CCGCTGAGAGGCACTGGGCTCCAGCACCTTGGAAGACAACTTGCCTTTGTTCCCAGACACTTGG
GCTGTTTACTTTTCCCTGCGGCCAGCGGCTAGCCGGACGGTGCCCTCGGTCCAGAAAAGGGCTT
AAGGGCAGTGATACCAGTCTCCAGGATCTAAGGCTGTTAGAGATGACGCTGGTTCTGTCCATGA
ATAGATTCTGCGAGCCCATTGTCTCAGAAGGAGCTGCTGAGATTGCCGGGTACCAAACACTATG
GGAGGCTGACAGCTACGGAGGTGCGAGCCCCCCAGGGCCAGCTCCAGTTCCTTCTCAGGGAGAC
CGGGGAGCCAGCTCACACCTGGCAGGATCACATTACAGGGGAATTCCAAATCCTATAAGCACAC
CCAAGGTCACATACTTCAAGAGGAAGTATGCAGAAGACGAGGATCTTCACCCACCACTCAGCAG
CTGCAGCCATAAAACCATCTCCATTTTCGAGGAGCGAGCACACATCCTTTACATGTCCTTGGAG
AAGCTCAGGTTCATCGATGACCCAGAAGTGTACCTGCGAAGGTCTGTTCTGATCAACAACCTGA
TGAAGAGGATCCACGGGGAGATTGTCATGCAGAACAGCTGGTGCCTCCCTGCCTGCTCCCTCGG
TGGCACCCCCGCCCAAGAGTGGTTCCTGGCTCAAGACTGTCCTTACCGGAAACGGCCCCGGGTG
GCCAAAGAGGAGTGGGAAAAGATCCACACTTGCTGTTTTTATCAGGAGTGTGGTGGTCACTGCC
TGAACCTACCCCTCTCTGTCAATACAAGTGTTGGAAGCACCTCGGCCGCCGCTGTGGCCTCGGC
TGCCTCTTCCTCTTCCTCCCCATCCACCTCTTCTTCATCCTCCCCATCCTCATCCTCCTCTCCC
TCTCCCTCTCCCTCTTCCTCCTCCTCCTCCTCCTCCTCTTCCCCTCTGCCTTTGCCTAGTTGCT
CCCACCATGTGGACTTTGACATAGGCAGTGCACCTATTTACAAGAGCCAAATACCCGCCAGCGA
AATCTTTGTCACTAACATTAGGTCGCTTGGTGTCCAGGAAAAGGTCAAATTCAACAATGATGGG
AAAGTAAGTCACGAAACCAGCAGAGATGGTGATGCCCTCGGCCAAGAACCTGTGGGGAACGACC
TTGATTTTGAGTGCAAAGGCCAATTTTACGATTATTTTGAGACTGGATATAATGAGAGAAACCG
TGTGAGTGAGTCTTGGAAAAAGTCTTTGAGGAAAAAGGAGCTTTCTCCGAGCAGCAAACTGTGC
TGCAACAGAGGGGGTAAAATGTGATGCCCCCCACTGGCGCGGAAGCACGCACAGCATGATCAGT
TTTTACTTTGGATTTTGTAGTTTTGTACAACAGATAAAATCATGCAGTGAACACCACGCCGGGT
TGTCTCATTGCCTGGAGATCAGATTGCACAAAACATCTGTACAGTAGGCATCTGCAAGCCACTT
ATTCATGTGATTTTTTGCCAAGGAAAGCCAACTTCATGTTTCAAAGTATACCTTAGTTTTCTTT
TCTTTTTCTTTTTTCTTTTCTTTTTTTTTTGTAAAAAAAAATCAGTAGAATAGATAGAAGAAAA
CATGCCCTCGTTATATTCCCACTGCCCCTCCAAGGAACCTGCGCTAGCCAAATGCAACATGTTT
GCCAGTTAATTAGGTAGTTACTTGGTAAACAAATCAATATAACCAGCAGAGGTGCCTGCTTCGA
TGTGATGCAGTATTTTTCTTTCCTGAGTAAAAGACTGGAGACAGGAAGCTAGATGAAGTGGTTT
CATGAGCTGTGTCATGTTTGTACTGGACAGGTTGGGGCAAAATGAAGCGCACCTGGCAAGACAG
CAATCTAGGATCTGTGGAGACAGTTCCCCACAAGCTCCTTGCTTGCCTGTGATGGGTAGTGGGT
GGCTAGAGAGGTGGCATACAGAGCCACCTCTGATGGGGTGATGATAGAGAGGTGGCACATACAG
AGCCATCTTTGATGGGGTGGCTAGAGAGGTGGTGTACAGAGCCATCTCTGATAGGGTCATAGGG
AGGTGGCATGCAAAGCCATCTTTGATGGGGTGGCTAGAGAGGTGGCGTTCAGGGCCATCTTAGT
GATGGGGTGATAGGTGGCATACAGGGCCATCTTGGGTGCCTTACTTTATCTTAATTTTTGCCAG
TGTGAAAATTAAGGATGAATCAGAGTTACAGCAGGGATTTGACAAAACACAGGGTGGATCCATG
CAGTTTGGAAACTTAACTTTGAACGATCGCGTTCAACTTTCGAGTTACCCTCCCCCTTTTTCCT
TTGTTTGTGACGCCCAGTGGCTGTGGGTCTGATATTTTTGGGTAGAGATGGAGAAGACAATGGG
GAAGGCCATCAGGCACAGAGAAGGCTGCCTTGGTTCTCCATGGCAACGAGCAGTTGCTTGGTCT
GGGCTCTCCCAGCTTTGGGCTGTTTTGTTTCCTTATCCAGTGACATTCACAGCCCGTGGCATGC
GTTATATTTTGACCTGTTTTTGCATCATTTCATGCGTTTAGACTCTTAAGAGCATGTGGTTTCT
ATATATGACTTTTGCTGTTGATTGAGAAGCACAATGTTAATAGAGTACGTGGTGATCAATATGT
TTTATCTTAAAGAATGTAAAGGTTTGTAGGTTGCGGAACGTTATTTTGGAGAAATGGGGCTCGC
TTGTCATAGATATTGTGTATTTGGCCAACACACTACTCAACAATACCTTGGATTTGCACATTGG
CAAGTGTACTCAGTGGGACTCGGAACGCCCCCACCAGCTCCTAATGAGCTACTCCAATCTCCAA
GGCCAAGGATTGGTCTGGGTGACTTGGGTCTCTTAAAACAATTATTTACAGGAACCAAATGCCA
AAAGGAAGAAATAGGTAAGTTCTCCCACTTTCTCCAAGATGAAGCTTTTTAATTATTGCTATTA
ATATTAAATAGGTCTCATTCATACAGTGTATGAGTAGATCATTTGGGCAATTGTCCACAAGGAC
CAATTTTTAAAAGATGTTCCTGTGTTATGGCTGAATAGTCTAGTAATGTCTCGTCCTTTATTTT
CAATATTTGATGAACATTTTGGTGTTGAAAACTTAGCTGATAGATGCTTGTACATGACTTGTGT
TGTAATATAGTGAGGTTTTCTTGATATATATTTATTAAAATGATCAAAATTCA

hide sequence

RefSeq Acc Id:

XM_017319739 ⟹ XP_017175228

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39	1	192,526,796 - 192,537,389 (-)	NCBI
GRCm38	1	192,844,488 - 192,855,083 (-)	NCBI

Sequence:

show sequence

CACCTCCCCGCGGGCTGCCAGGCCCACGCCCCCGCCTCTAGCAGTCTCCTCGGCCCCGCAACTT
TCCCGAGTGCCGGGCCGCAGGAGCGGGGCACCAAGGTCCACCCCTAGCTCCAGCGGCGCGTACC
GCGCGGGCGGCAGCAGCTCGGCGAAGGACCAGGGCAGCTGCGGGCTGGAGTGTGGCCCCGCCAG
CCGCTGTGAGTCATAGCCTTGGAATCCCACCTTGGCGTGTATTTCCCATAGAAGGAAACTTGGT
TTTTAGAAAGAGCGAATAATGATAGCCCTTATTCTTCAGGAGAGGCACTGGGCTCCAGCACCTT
GGAAGACAACTTGCCTTTGTTCCCAGACACTTGGGCTGTTTACTTTTCCCTGCGGCCAGCGGCT
AGCCGGACGGTGCCCTCGGTCCAGAAAAGGGCTTAAGGGCAGTGATACCAGTCTCCAGGATCTA
AGGCTGTTAGAGATGACGCTGGTTCTGTCCATGAATAGATTCTGCGAGCCCATTGTCTCAGAAG
GAGCTGCTGAGATTGCCGGGTACCAAACACTATGGGAGGCTGACAGCTACGGAGGTGCGAGCCC
CCCAGGGCCAGCTCCAGTTCCTTCTCAGGGAGACCGGGGAGCCAGCTCACACCTGGCAGGATCA
CATTACAGGGGAATTCCAAATCCTATAAGCACACCCAAGGTCACATACTTCAAGAGGAAGTATG
CAGAAGACGAGGATCTTCACCCACCACTCAGCAGCTGCAGCCATAAAACCATCTCCATTTTCGA
GGAGCGAGCACACATCCTTTACATGTCCTTGGAGAAGCTCAGGTTCATCGATGACCCAGAAGTG
TACCTGCGAAGGTCTGTTCTGATCAACAACCTGATGAAGAGGATCCACGGGGAGATTGTCATGC
AGAACAGCTGGTGCCTCCCTGCCTGCTCCCTCGGTGGCACCCCCGCCCAAGAGTGGTTCCTGGC
TCAAGACTGTCCTTACCGGAAACGGCCCCGGGTGGCCAAAGAGGAGTGGGAAAAGATCCACACT
TGCTGTTTTTATCAGGAGTGTGGTGGTCACTGCCTGAACCTACCCCTCTCTGTCAATACAAGTG
TTGGAAGCACCTCGGCCGCCGCTGTGGCCTCGGCTGCCTCTTCCTCTTCCTCCCCATCCACCTC
TTCTTCATCCTCCCCATCCTCATCCTCCTCTCCCTCTCCCTCTCCCTCTTCCTCCTCCTCCTCC
TCCTCCTCTTCCCCTCTGCCTTTGCCTAGTTGCTCCCACCATGTGGACTTTGACATAGGCAGTG
CACCTATTTACAAGAGCCAAATACCCGCCAGCGAAATCTTTGTCACTAACATTAGGTCGCTTGG
TGTCCAGGAAAAGGTCAAATTCAACAATGATGGGAAAGTAAGTCACGAAACCAGCAGAGATGGT
GATGCCCTCGGCCAAGAACCTGTGGGGAACGACCTTGATTTTGAGTGCAAAGGCCAATTTTACG
ATTATTTTGAGACTGGATATAATGAGAGAAACCGTGTGAGTGAGTCTTGGAAAAAGTCTTTGAG
GAAAAAGGAGCTTTCTCCGAGCAGCAAACTGTGCTGCAACAGAGGGGGTAAAATGTGATGCCCC
CCACTGGCGCGGAAGCACGCACAGCATGATCAGTTTTTACTTTGGATTTTGTAGTTTTGTACAA
CAGATAAAATCATGCAGTGAACACCACGCCGGGTTGTCTCATTGCCTGGAGATCAGATTGCACA
AAACATCTGTACAGTAGGCATCTGCAAGCCACTTATTCATGTGATTTTTTGCCAAGGAAAGCCA
ACTTCATGTTTCAAAGTATACCTTAGTTTTCTTTTCTTTTTCTTTTTTCTTTTCTTTTTTTTTT
GTAAAAAAAAATCAGTAGAATAGATAGAAGAAAACATGCCCTCGTTATATTCCCACTGCCCCTC
CAAGGAACCTGCGCTAGCCAAATGCAACATGTTTGCCAGTTAATTAGGTAGTTACTTGGTAAAC
AAATCAATATAACCAGCAGAGGTGCCTGCTTCGATGTGATGCAGTATTTTTCTTTCCTGAGTAA
AAGACTGGAGACAGGAAGCTAGATGAAGTGGTTTCATGAGCTGTGTCATGTTTGTACTGGACAG
GTTGGGGCAAAATGAAGCGCACCTGGCAAGACAGCAATCTAGGATCTGTGGAGACAGTTCCCCA
CAAGCTCCTTGCTTGCCTGTGATGGGTAGTGGGTGGCTAGAGAGGTGGCATACAGAGCCACCTC
TGATGGGGTGATGATAGAGAGGTGGCACATACAGAGCCATCTTTGATGGGGTGGCTAGAGAGGT
GGTGTACAGAGCCATCTCTGATAGGGTCATAGGGAGGTGGCATGCAAAGCCATCTTTGATGGGG
TGGCTAGAGAGGTGGCGTTCAGGGCCATCTTAGTGATGGGGTGATAGGTGGCATACAGGGCCAT
CTTGGGTGCCTTACTTTATCTTAATTTTTGCCAGTGTGAAAATTAAGGATGAATCAGAGTTACA
GCAGGGATTTGACAAAACACAGGGTGGATCCATGCAGTTTGGAAACTTAACTTTGAACGATCGC
GTTCAACTTTCGAGTTACCCTCCCCCTTTTTCCTTTGTTTGTGACGCCCAGTGGCTGTGGGTCT
GATATTTTTGGGTAGAGATGGAGAAGACAATGGGGAAGGCCATCAGGCACAGAGAAGGCTGCCT
TGGTTCTCCATGGCAACGAGCAGTTGCTTGGTCTGGGCTCTCCCAGCTTTGGGCTGTTTTGTTT
CCTTATCCAGTGACATTCACAGCCCGTGGCATGCGTTATATTTTGACCTGTTTTTGCATCATTT
CATGCGTTTAGACTCTTAAGAGCATGTGGTTTCTATATATGACTTTTGCTGTTGATTGAGAAGC
ACAATGTTAATAGAGTACGTGGTGATCAATATGTTTTATCTTAAAGAATGTAAAGGTTTGTAGG
TTGCGGAACGTTATTTTGGAGAAATGGGGCTCGCTTGTCATAGATATTGTGTATTTGGCCAACA
CACTACTCAACAATACCTTGGATTTGCACATTGGCAAGTGTACTCAGTGGGACTCGGAACGCCC
CCACCAGCTCCTAATGAGCTACTCCAATCTCCAAGGCCAAGGATTGGTCTGGGTGACTTGGGTC
TCTTAAAACAATTATTTACAGGAACCAAATGCCAAAAGGAAGAAATAGGTAAGTTCTCCCACTT
TCTCCAAGATGAAGCTTTTTAATTATTGCTATTAATATTAAATAGGTCTCATTCATACAGTGTA
TGAGTAGATCATTTGGGCAATTGTCCACAAGGACCAATTTTTAAAAGATGTTCCTGTGTTATGG
CTGAATAGTCTAGTAATGTCTCGTCCTTTATTTTCAATATTTGATGAACATTTTGGTGTTGAAA
ACTTAGCTGATAGATGCTTGTACATGACTTGTGTTGTAATATAGTGAGGTTTTCTTGATATATA
TTTATTAAAATGATCAAAATTCA

hide sequence

Protein Sequences


Protein RefSeqs	NP_001171265	(Get FASTA)	NCBI Sequence Viewer
	NP_937890	(Get FASTA)	NCBI Sequence Viewer
	XP_006497311	(Get FASTA)	NCBI Sequence Viewer
	XP_017175228	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	A7DTG3	(Get FASTA)	NCBI Sequence Viewer
	AAH60251	(Get FASTA)	NCBI Sequence Viewer
	EDL12961	(Get FASTA)	NCBI Sequence Viewer
	EDL12962	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSMUSP00000016406
	ENSMUSP00000016406.8
	ENSMUSP00000116176
	ENSMUSP00000116176.2
	ENSMUSP00000142132.2

RefSeq Acc Id:

NP_937890 ⟸ NM_198247

- UniProtKB:

Q6PAK2 (UniProtKB/Swiss-Prot), A7DTG3 (UniProtKB/Swiss-Prot)

- Sequence:

show sequence

MTLVLSMNRFCEPIVSEGAAEIAGYQTLWEADSYGGASPPGPAPVPSQGDRGASSHLAGSHYRG
IPNPISTPKVTYFKRKYAEDEDLHPPLSSCSHKTISIFEERAHILYMSLEKLRFIDDPEVYLRR
SVLINNLMKRIHGEIVMQNSWCLPACSLGGTPAQEWFLAQDCPYRKRPRVAKEEWEKIHTCCFY
QECGGHCLNLPLSVNTSVGSTSAAAVASAASSSSSPSTSSSSSPSSSSSPSPSPSSSSSSSSSS
PLPLPSCSHHVDFDIGSAPIYKSQIPASEIFVTNIRSLGVQEKVKFNNDGKVSHETSRDGDALG
QEPVGNDLDFECKGQFYDYFETGYNERNRVSESWKKSLRKKELSPSSKLCCNRGGKM

hide sequence

RefSeq Acc Id:

NP_001171265 ⟸ NM_001177794

- UniProtKB:

Q6PAK2 (UniProtKB/Swiss-Prot), A7DTG3 (UniProtKB/Swiss-Prot)

- Sequence:

show sequence

MTLVLSMNRFCEPIVSEGAAEIAGYQTLWEADSYGGASPPGPAPVPSQGDRGASSHLAGSHYRG
IPNPISTPKVTYFKRKYAEDEDLHPPLSSCSHKTISIFEERAHILYMSLEKLRFIDDPEVYLRR
SVLINNLMKRIHGEIVMQNSWCLPACSLGGTPAQEWFLAQDCPYRKRPRVAKEEWEKIHTCCFY
QECGGHCLNLPLSVNTSVGSTSAAAVASAASSSSSPSTSSSSSPSSSSSPSPSPSSSSSSSSSS
PLPLPSCSHHVDFDIGSAPIYKSQIPASEIFVTNIRSLGVQEKVKFNNDGKVSHETSRDGDALG
QEPVGNDLDFECKGQFYDYFETGYNERNRVSESWKKSLRKKELSPSSKLCCNRGGKM

hide sequence

RefSeq Acc Id:	XP_006497311 ⟸ XM_006497248
- Peptide Label:	isoform X2
- UniProtKB:	Q6PAK2 (UniProtKB/Swiss-Prot), A7DTG3 (UniProtKB/Swiss-Prot)
- Sequence:	show sequence MTLVLSMNRFCEPIVSEGAAEIAGYQTLWEADSYGGASPPGPAPVPSQGDRGASSHLAGSHYRG IPNPISTPKVTYFKRKYAEDEDLHPPLSSCSHKTISIFEERAHILYMSLEKLRFIDDPEVYLRR SVLINNLMKRIHGEIVMQNSWCLPACSLGGTPAQEWFLAQDCPYRKRPRVAKEEWEKIHTCCFY QECGGHCLNLPLSVNTSVGSTSAAAVASAASSSSSPSTSSSSSPSSSSSPSPSPSSSSSSSSSS PLPLPSCSHHVDFDIGSAPIYKSQIPASEIFVTNIRSLGVQEKVKFNNDGKVSHETSRDGDALG QEPVGNDLDFECKGQFYDYFETGYNERNRVSESWKKSLRKKELSPSSKLCCNRGGKM hide sequence

RefSeq Acc Id:

XP_017175228 ⟸ XM_017319739

- Peptide Label:

isoform X1

- Sequence:

show sequence

MIALILQERHWAPAPWKTTCLCSQTLGLFTFPCGQRLAGRCPRSRKGLKGSDTSLQDLRLLEMT
LVLSMNRFCEPIVSEGAAEIAGYQTLWEADSYGGASPPGPAPVPSQGDRGASSHLAGSHYRGIP
NPISTPKVTYFKRKYAEDEDLHPPLSSCSHKTISIFEERAHILYMSLEKLRFIDDPEVYLRRSV
LINNLMKRIHGEIVMQNSWCLPACSLGGTPAQEWFLAQDCPYRKRPRVAKEEWEKIHTCCFYQE
CGGHCLNLPLSVNTSVGSTSAAAVASAASSSSSPSTSSSSSPSSSSSPSPSPSSSSSSSSSSPL
PLPSCSHHVDFDIGSAPIYKSQIPASEIFVTNIRSLGVQEKVKFNNDGKVSHETSRDGDALGQE
PVGNDLDFECKGQFYDYFETGYNERNRVSESWKKSLRKKELSPSSKLCCNRGGKM

hide sequence

RefSeq Acc Id:

ENSMUSP00000016406 ⟸ ENSMUST00000016406

RefSeq Acc Id:

ENSMUSP00000116176 ⟸ ENSMUST00000155579

RefSeq Acc Id:

ENSMUSP00000142132 ⟸ ENSMUST00000155503

Protein Domains

SERTA

Protein Structures

Name	Modeler	Protein Id	AA Range	Protein Structure
AF-A7DTG3-F1-model_v2	AlphaFold	A7DTG3	1-377	view protein structure

Promoters

RGD ID:

6876150

Promoter ID:

EPDNEW_M1526

Type:

initiation region

Name:

Sertad4_1

Description:

Mus musculus SERTA domain containing 4 , transcript variant 1,mRNA.

SO ACC ID:

SO:0000170

Source:

EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)

Experiment Methods:

Single-end sequencing.

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm38	1	192,855,707 - 192,855,767	EPDNEW

RGD ID:

6818452

Promoter ID:

MM_KWN:3340

Type:

Non-CpG

SO ACC ID:

SO:0000170

Source:

MPROMDB

Tissues & Cell Lines:

3T3L1_Day1, 3T3L1_Day4, MEF_B4, MEF_B6, Spleen

Transcripts:

OTTMUST00000066888

Position:

Mouse Assembly	Chr	Position (strand)	Source
MGSCv36	1	194,677,461 - 194,678,812 (-)	MPROMDB

RGD ID:

6818451

Promoter ID:

MM_KWN:3342

Type:

CpG-Island

SO ACC ID:

SO:0000170

Source:

MPROMDB

Tissues & Cell Lines:

3T3L1_Day0, 3T3L1_Day1, 3T3L1_Day2, 3T3L1_Day3, 3T3L1_Day4, MEF_B4, MEF_B6

Transcripts:

OTTMUST00000066794, OTTMUST00000066887

Position:

Mouse Assembly	Chr	Position (strand)	Source
MGSCv36	1	194,681,709 - 194,682,209 (-)	MPROMDB

Additional Information

External Database Links

Database	Acc Id	Source(s)
AGR Gene	MGI:2443496	AgrOrtholog
Ensembl Genes	ENSMUSG00000016262	Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Ensembl Transcript	ENSMUST00000016406	ENTREZGENE
	ENSMUST00000016406.14	UniProtKB/Swiss-Prot
	ENSMUST00000155503.3	UniProtKB/TrEMBL
	ENSMUST00000155579	ENTREZGENE
	ENSMUST00000155579.8	UniProtKB/Swiss-Prot
InterPro	SERTA_dom	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	SERTAD4	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report	mmu:214791	UniProtKB/Swiss-Prot
MGD	MGI:2443496	ENTREZGENE
NCBI Gene	214791	ENTREZGENE
PANTHER	PTHR14272	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	SERTA DOMAIN-CONTAINING PROTEIN 4	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam	SERTA	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen	Sertad4	PhenoGen
PROSITE	SERTA	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt	A0A0A6YXT5_MOUSE	UniProtKB/TrEMBL
	A7DTG3	ENTREZGENE
	Q6PAK2	ENTREZGENE
	SRTD4_MOUSE	UniProtKB/Swiss-Prot
UniProt Secondary	Q6PAK2	UniProtKB/Swiss-Prot

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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Imported Disease Annotations - ClinVar