Or7c19 (olfactory receptor family 7 subfamily C member 19) - Rat Genome Database

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Gene: Or7c19 (olfactory receptor family 7 subfamily C member 19) Mus musculus
Analyze
Symbol: Or7c19
Name: olfactory receptor family 7 subfamily C member 19
RGD ID: 1557687
MGI Page MGI
Description: Predicted to enable olfactory receptor activity. Predicted to be involved in signal transduction. Predicted to act upstream of or within G protein-coupled receptor signaling pathway and sensory perception of smell. Predicted to be located in membrane. Predicted to be active in plasma membrane.
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: GA_x6K02T2NUPS-13298842-13299780; MGC157530; MOR141; MOR141-3; olfactory receptor 371; olfactory receptor MOR141-3; Olfr371
RGD Orthologs
Human
Rat
Bonobo
Dog
Pig
Green Monkey
Alliance Genes
More Info more info ...
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39885,957,126 - 85,958,064 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl885,952,617 - 85,958,138 (+)EnsemblGRCm39 Ensembl
GRCm38885,230,497 - 85,231,435 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl885,225,988 - 85,231,509 (+)EnsemblGRCm38mm10GRCm38
MGSCv37887,754,396 - 87,755,334 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36888,120,602 - 88,121,540 (+)NCBIMGSCv36mm8
Celera889,522,597 - 89,523,535 (+)NCBICelera
Cytogenetic Map8C3NCBI
cM Map841.55NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Molecular Function

References

References - curated
# Reference Title Reference Citation
1. MGDs mouse GO annotations MGD data from the GO Consortium
2. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
3. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:11802173   PMID:11875048   PMID:12477932   PMID:14611657   PMID:21267068   PMID:21873635   PMID:32295537  


Genomics

Comparative Map Data
Or7c19
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39885,957,126 - 85,958,064 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl885,952,617 - 85,958,138 (+)EnsemblGRCm39 Ensembl
GRCm38885,230,497 - 85,231,435 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl885,225,988 - 85,231,509 (+)EnsemblGRCm38mm10GRCm38
MGSCv37887,754,396 - 87,755,334 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36888,120,602 - 88,121,540 (+)NCBIMGSCv36mm8
Celera889,522,597 - 89,523,535 (+)NCBICelera
Cytogenetic Map8C3NCBI
cM Map841.55NCBI
OR7D2
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38199,178,979 - 9,188,818 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl199,178,979 - 9,188,818 (+)EnsemblGRCh38hg38GRCh38
GRCh37199,289,655 - 9,299,494 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 36199,157,270 - 9,160,493 (+)NCBINCBI36Build 36hg18NCBI36
Build 34199,157,269 - 9,160,493NCBI
Celera199,191,715 - 9,194,938 (+)NCBICelera
Cytogenetic Map19p13.2NCBI
HuRef198,877,810 - 8,881,033 (+)NCBIHuRef
CHM1_1199,295,931 - 9,299,154 (+)NCBICHM1_1
T2T-CHM13v2.0199,305,174 - 9,315,012 (+)NCBIT2T-CHM13v2.0
Or7h8
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8827,057,213 - 27,058,178 (+)NCBIGRCr8
mRatBN7.2818,780,512 - 18,781,930 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl818,780,965 - 18,781,930 (+)EnsemblmRatBN7.2 Ensembl
Rnor_6.0821,271,150 - 21,272,128 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl821,271,190 - 21,272,116 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0821,335,428 - 21,336,366 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4819,255,187 - 19,256,077 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
Celera820,188,755 - 20,189,720 (+)NCBICelera
Cytogenetic Map8q13NCBI
LOC100994331
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v22014,123,349 - 14,125,350 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11913,108,146 - 13,110,147 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0198,741,806 - 8,743,172 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.1199,430,349 - 9,431,289 (+)NCBIpanpan1.1PanPan1.1panPan2
OR7C19
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.12047,162,136 - 47,163,074 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha2047,011,555 - 47,012,493 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.02047,653,631 - 47,654,569 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl2047,653,631 - 47,654,569 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.12046,884,364 - 46,885,302 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.02047,302,373 - 47,303,311 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.02047,574,771 - 47,575,709 (-)NCBIUU_Cfam_GSD_1.0
LOC100514275
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1268,364,967 - 68,365,893 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2268,667,446 - 68,668,373 (+)NCBISscrofa10.2Sscrofa10.2susScr3
LOC103233855
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.168,386,269 - 8,409,876 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl68,408,832 - 8,409,770 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366607411,742,053 - 11,743,380 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0

Variants

.
Variants in Or7c19
43 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:72
Count of miRNA genes:66
Interacting mature miRNAs:66
Transcripts:ENSMUST00000070849
Prediction methods:Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
4140967Bmd39_mbone mineral density 39 (mouse)Not determined832506572117965439Mouse
1558875Eae31_mexperimental allergic encephalomyelitis susceptibility 31 (mouse)Not determined835109930115563747Mouse
1301013Capsq4_mcapsaicin sensitivity related QTL 4 (mouse)Not determined83663015493455280Mouse
27226754Femd6_mfemur midshaft diameter 6, 10 week (mouse)837867154110326632Mouse
12904744Carcdq1_mcardiac collagen deposition QTL 1 (mouse)84016229795416226Mouse
14700686Civq3_mcerebral infarct volume QTL 3 (mouse)85233484386334843Mouse
1301506Aevm1_mautoimmune extremity vasculitis in MRL mice 1 (mouse)Not determined85474046188740637Mouse
1301952Im3_mimmunoregulatory 3 (mouse)Not determined85515925889159407Mouse
10412287Carg3_mCandida albicans resistance gene 3 (mouse)Not determined85629887290298872Mouse
11353828Gf7_mgonadal fat pad weight 7 (mouse)85892810792928107Mouse
10043975Obq31_mobesity QTL 31 (mouse)Not determined85913640493136404Mouse
1301688Orch6_mautoimmune orchitis resistance 6 (mouse)Not determined86151347995513605Mouse
4141285Tgq18_mtriglyceride QTL 18 (mouse)Not determined6418673698186736Mouse
4141797Skmw16_mskeletal muscle weight 16 (mouse)Not determined86466617698666325Mouse
1357787Vtbt5_mvertebral trabecular bone trait 5 (mouse)Not determined866084397100084549Mouse
10043992Hbnr11_mHeligmosomoides bakeri nematode resistance 11 (mouse)Not determined866326836100326976Mouse
4142283Imraq2_mimmune response to AAV2 QTL 2 (mouse)Not determined871032003105032123Mouse
1301767Fcsa2_mfemoral cross-sectional area 2 (mouse)Not determined871032003105032123Mouse
4141395Char2a_mP. chabaudi malaria resistance QTL 2a (mouse)Not determined7158942790929226Mouse
1357708Orq1_movulation rate QTL 1 (mouse)Not determined871740461124622354Mouse
4142023W3q5_mweight 3 weeks QTL 5 (mouse)Not determined71740461124622354Mouse
1558780Idd22_minsulin dependent diabetes susceptibility 22 (mouse)Not determined871829531105829637Mouse
1301872Cd4ts3_mCD4 T cell subset 3 (mouse)Not determined872122809106123021Mouse
1300920Pitm3_mprion incubation time 3 (mouse)Not determined873929123107929226Mouse
27095912Pglq14_mpelvic girdle length QTL 14, 16 week (mouse)874126628126826739Mouse
1558890Lith18_mlithogenic gene 18 (mouse)Not determined876402145110402251Mouse
1357470Obq16_mobesity QTL 16 (mouse)Not determined876411976110412125Mouse
10412234Nhdlq14_mnon-HDL QTL 14 (mouse)Not determined876411976110412125Mouse
1301874Hdlq16_mHDL QTL 16 (mouse)Not determined876411976110412125Mouse
1301099Cbm2_mcerebellum weight 2 (mouse)Not determined879245241113245331Mouse
1301581Char2_mP. chabaudi malaria resistance QTL 2 (mouse)Not determined879808806113809031Mouse
12904012Cfq10_mconditioned fear QTL 10 (mouse)88079340489740987Mouse
10755530Wbc2_mwhite blood cell count 2 (mouse)881819296115819296Mouse
10755519Wbc1_mwhite blood cell count 1 (mouse)882345783116345783Mouse
1301766Desp1_mdespair 1 (mouse)Not determined885486208119486373Mouse

Markers in Region
UniSTS:495358  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38885,230,417 - 85,231,492UniSTSGRCm38
MGSCv37887,754,316 - 87,755,391UniSTSGRCm37
Celera889,522,517 - 89,523,592UniSTS
Cytogenetic Map8C3UniSTS


Expression


Sequence


Reference Sequences
RefSeq Acc Id: ENSMUST00000070849   ⟹   ENSMUSP00000077921
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl885,957,126 - 85,958,064 (+)Ensembl
GRCm38.p6 Ensembl885,230,497 - 85,231,435 (+)Ensembl
RefSeq Acc Id: ENSMUST00000218663   ⟹   ENSMUSP00000151714
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl885,952,617 - 85,958,138 (+)Ensembl
GRCm38.p6 Ensembl885,225,988 - 85,231,509 (+)Ensembl
RefSeq Acc Id: NM_146859   ⟹   NP_667070
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39885,957,126 - 85,958,064 (+)NCBI
GRCm38885,230,497 - 85,231,435 (+)ENTREZGENE
MGSCv37887,754,396 - 87,755,334 (+)RGD
Celera889,522,597 - 89,523,535 (+)RGD
cM Map8 ENTREZGENE
Sequence:
Protein Sequences
Protein RefSeqs NP_667070 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein AAI27976 (Get FASTA)   NCBI Sequence Viewer  
  AAL60895 (Get FASTA)   NCBI Sequence Viewer  
  AAP70902 (Get FASTA)   NCBI Sequence Viewer  
  EDL11003 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSMUSP00000077921
  ENSMUSP00000077921.3
  ENSMUSP00000151714.2
Reference Protein Sequences
RefSeq Acc Id: NP_667070   ⟸   NM_146859
- UniProtKB: Q8VGB8 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: ENSMUSP00000151714   ⟸   ENSMUST00000218663
RefSeq Acc Id: ENSMUSP00000077921   ⟸   ENSMUST00000070849
Protein Domains
G-protein coupled receptors family 1 profile

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-Q8VGB8-F1-model_v2 AlphaFold Q8VGB8 1-312 view protein structure


Additional Information

Database Acc Id Source(s)
AGR Gene MGI:3030205 AgrOrtholog
Ensembl Genes ENSMUSG00000051952 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSMUST00000070849 ENTREZGENE
  ENSMUST00000070849.6 UniProtKB/TrEMBL
  ENSMUST00000218663.2 UniProtKB/TrEMBL
Gene3D-CATH Rhodopsin 7-helix transmembrane proteins UniProtKB/TrEMBL
InterPro 7TM_GPCR_Rhodpsn UniProtKB/TrEMBL
  GPCR_Rhodpsn_supfam UniProtKB/TrEMBL
  Olfact_rcpt UniProtKB/TrEMBL
KEGG Report mmu:258858 UniProtKB/TrEMBL
MGD MGI:3030205 ENTREZGENE
NCBI Gene 258858 ENTREZGENE
PANTHER OLFACTORY RECEPTOR UniProtKB/TrEMBL
  OLFACTORY RECEPTOR 7C1 UniProtKB/TrEMBL
Pfam 7tm_4 UniProtKB/TrEMBL
PhenoGen Or7c19 PhenoGen
PRINTS GPCRRHODOPSN UniProtKB/TrEMBL
  OLFACTORYR UniProtKB/TrEMBL
PROSITE G_PROTEIN_RECEP_F1_1 UniProtKB/TrEMBL
  G_PROTEIN_RECEP_F1_2 UniProtKB/TrEMBL
Superfamily-SCOP Family A G protein-coupled receptor-like UniProtKB/TrEMBL
UniProt Q8VGB8 ENTREZGENE, UniProtKB/TrEMBL


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2022-05-24 Or7c19  olfactory receptor family 7 subfamily C member 19  Olfr371  olfactory receptor 371  Symbol and/or name change 5135510 APPROVED