Hs6st2 (heparan sulfate 6-O-sulfotransferase 2) - Rat Genome Database

Send us a Message



Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Gene: Hs6st2 (heparan sulfate 6-O-sulfotransferase 2) Mus musculus
Analyze
Symbol: Hs6st2
Name: heparan sulfate 6-O-sulfotransferase 2
RGD ID: 1557635
MGI Page MGI
Description: Exhibits heparan sulfate 6-O-sulfotransferase activity. Involved in heparan sulfate proteoglycan biosynthetic process, enzymatic modification. Predicted to localize to integral component of membrane. Is expressed in several structures, including brain; embryo mesenchyme; eye; foot bone; and urethra. Human ortholog(s) of this gene implicated in Paganini-Miozzo syndrome. Orthologous to human HS6ST2 (heparan sulfate 6-O-sulfotransferase 2); PARTICIPATES IN heparan sulfate biosynthetic pathway; INTERACTS WITH 1,1-dichloroethene; 2,3,7,8-tetrachlorodibenzodioxine; arsenite(3-).
Type: protein-coding
RefSeq Status: VALIDATED
Also known as: 6OS; 6OST2; heparan-sulfate 6-O-sulfotransferase 2; HS6ST-2; mHS6ST-2
RGD Orthologs
Human
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: GRCm38 - Mouse Genome Assembly GRCm38
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39X50,475,514 - 50,770,922 (-)NCBIGRCm39mm39
GRCm39 EnsemblX50,476,089 - 50,770,733 (-)Ensembl
GRCm38X51,386,637 - 51,681,705 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 EnsemblX51,387,212 - 51,681,856 (-)EnsemblGRCm38mm10GRCm38
MGSCv37X48,740,389 - 49,034,779 (-)NCBIGRCm37mm9NCBIm37
MGSCv36X47,631,840 - 47,925,107 (-)NCBImm8
CeleraX38,808,280 - 39,103,506 (-)NCBICelera
Cytogenetic MapXA5NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Function

Molecular Pathway Annotations     Click to see Annotation Detail View
Phenotype Annotations     Click to see Annotation Detail View

Mammalian Phenotype
References

Additional References at PubMed
PMID:10349636   PMID:10644753   PMID:10922068   PMID:11042159   PMID:11076861   PMID:11217851   PMID:12460940   PMID:12477932   PMID:12611590   PMID:14681479   PMID:15489334   PMID:15499561  
PMID:15944372   PMID:16141072   PMID:16141073   PMID:16326709   PMID:17198697   PMID:17405882   PMID:18055048   PMID:18281280   PMID:18287559   PMID:20410206   PMID:21267068   PMID:21357686  
PMID:21873635   PMID:21951307   PMID:21972422   PMID:22745308   PMID:23074159   PMID:23223449   PMID:23281850   PMID:23690091   PMID:24753163   PMID:24924191   PMID:26133911   PMID:26297811  
PMID:27048738   PMID:27655933   PMID:28219675   PMID:28942923   PMID:30228991  


Genomics

Comparative Map Data
Hs6st2
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39X50,475,514 - 50,770,922 (-)NCBIGRCm39mm39
GRCm39 EnsemblX50,476,089 - 50,770,733 (-)Ensembl
GRCm38X51,386,637 - 51,681,705 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 EnsemblX51,387,212 - 51,681,856 (-)EnsemblGRCm38mm10GRCm38
MGSCv37X48,740,389 - 49,034,779 (-)NCBIGRCm37mm9NCBIm37
MGSCv36X47,631,840 - 47,925,107 (-)NCBImm8
CeleraX38,808,280 - 39,103,506 (-)NCBICelera
Cytogenetic MapXA5NCBI
HS6ST2
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38.p13 EnsemblX132,626,016 - 132,961,395 (-)EnsemblGRCh38hg38GRCh38
GRCh38X132,626,012 - 132,961,370 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh37X131,760,043 - 132,095,398 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 36X131,587,719 - 131,923,093 (-)NCBINCBI36hg18NCBI36
CeleraX132,146,408 - 132,481,789 (-)NCBI
Cytogenetic MapXq26.2NCBI
HuRefX121,164,083 - 121,496,636 (-)NCBIHuRef
CHM1_1X131,671,551 - 132,006,998 (-)NCBICHM1_1
Hs6st2
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mRatBN7.2X130,966,547 - 131,261,629 (-)NCBI
Rnor_6.0 EnsemblX138,677,580 - 138,972,684 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_6.0X138,675,326 - 138,972,774 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.0X138,733,912 - 139,028,075 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4X138,268,438 - 138,566,049 (-)NCBIRGSC3.4rn4RGSC3.4
CeleraX129,889,782 - 130,179,847 (-)NCBICelera
Cytogenetic MapXq36NCBI
Hs6st2
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554732,002,725 - 2,289,662 (+)EnsemblChiLan1.0
ChiLan1.0NW_0049554732,002,475 - 2,291,868 (+)NCBIChiLan1.0ChiLan1.0
HS6ST2
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
PanPan1.1X132,063,409 - 132,396,038 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 EnsemblX132,065,614 - 132,395,772 (-)Ensemblpanpan1.1panPan2
Mhudiblu_PPA_v0X121,757,028 - 122,090,371 (-)NCBIMhudiblu_PPA_v0panPan3
HS6ST2
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1X103,529,705 - 103,816,049 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 EnsemblX103,531,378 - 103,815,538 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_TashaX89,701,832 - 89,987,973 (-)NCBI
ROS_Cfam_1.0X105,389,057 - 105,672,488 (-)NCBI
UMICH_Zoey_3.1X102,799,821 - 103,086,005 (-)NCBI
UNSW_CanFamBas_1.0X104,675,560 - 104,961,216 (-)NCBI
UU_Cfam_GSD_1.0X104,447,839 - 104,734,667 (-)NCBI
Hs6st2
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2X101,700,046 - 101,981,296 (-)NCBI
SpeTri2.0NW_0049366911,976,449 - 2,257,303 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
HS6ST2
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 EnsemblX108,757,821 - 109,044,695 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1X108,755,577 - 109,043,976 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2X124,748,947 - 124,840,520 (-)NCBISscrofa10.2Sscrofa10.2susScr3
HS6ST2
(Chlorocebus sabaeus - African green monkey)
Vervet AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1X107,779,998 - 108,122,567 (-)NCBI
Vero_WHO_p1.0NW_02366606545,266,575 - 45,613,462 (-)NCBI
Hs6st2
(Heterocephalus glaber - naked mole-rat)
Molerat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_00462479712,356,538 - 12,665,283 (-)NCBI

Position Markers
DXMit106  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38X51,613,679 - 51,613,763UniSTSGRCm38
MGSCv37X48,966,856 - 48,966,940UniSTSGRCm37
CeleraX39,035,547 - 39,035,631UniSTS
Cytogenetic MapXA3.3UniSTS
cM MapX15.5UniSTS
Whitehead GeneticX18.6UniSTS
Whitehead/MRC_RHX622.61UniSTS
Hs6st2  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38X51,389,056 - 51,390,361UniSTSGRCm38
MGSCv37X48,743,112 - 48,743,314UniSTSGRCm37
MGSCv37X48,742,467 - 48,742,912UniSTSGRCm37
MGSCv37X48,742,467 - 48,742,856UniSTSGRCm37
CeleraX38,810,124 - 38,811,429UniSTS
Cytogenetic MapXA3.3UniSTS
cM MapX UniSTS
UniSTS:238025  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38X51,676,839 - 51,677,023UniSTSGRCm38
MGSCv37X49,030,016 - 49,030,200UniSTSGRCm37
CeleraX39,098,743 - 39,098,927UniSTS
Cytogenetic MapXA3.3UniSTS
px-45d12  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38X51,560,337 - 51,560,546UniSTSGRCm38
MGSCv37X48,913,514 - 48,913,723UniSTSGRCm37
CeleraX38,981,726 - 38,981,935UniSTS
Cytogenetic MapXA3.3UniSTS
px-61b7  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38X51,531,546 - 51,531,732UniSTSGRCm38
MGSCv37X48,884,723 - 48,884,909UniSTSGRCm37
CeleraX38,952,896 - 38,953,086UniSTS
Cytogenetic MapXA3.3UniSTS
Hs6st2  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38X51,389,635 - 51,389,831UniSTSGRCm38
CeleraX38,810,703 - 38,810,899UniSTS
Cytogenetic MapXA3.3UniSTS
Hs6st2  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38X51,389,290 - 51,389,735UniSTSGRCm38
MGSCv37X48,742,467 - 48,742,912UniSTSGRCm37
CeleraX38,810,358 - 38,810,803UniSTS
Cytogenetic MapXA3.3UniSTS
Hs6st2  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38X51,389,290 - 51,389,679UniSTSGRCm38
MGSCv37X48,742,467 - 48,742,856UniSTSGRCm37
CeleraX38,810,358 - 38,810,747UniSTS
Cytogenetic MapXA3.3UniSTS
cM MapX UniSTS
Hs6st2  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38X51,389,935 - 51,390,137UniSTSGRCm38
MGSCv37X48,743,112 - 48,743,314UniSTSGRCm37
CeleraX38,811,003 - 38,811,205UniSTS
Cytogenetic MapXA3.3UniSTS


QTLs in Region (GRCm38)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1357433Dbts2_mdiabetes 2 (mouse)Not determinedX7360056151324042Mouse
13208553Wght11_mweight 11 (mouse)X1200000060000000Mouse
13208557Lgth13_mbody length 13 (mouse)X1200000060000000Mouse
27226750Femd9_mfemur midshaft diameter 9, 10 week (mouse)X3390000056800000Mouse
27226780Femd12_mfemur midshaft diameter 12, 16 week (mouse)X3540000057800000Mouse
13208567Bmiq12_mbody mass index QTL 12 (mouse)X3600000078000000Mouse
4141565Pbwg21_mpostnatal body weight growth 21 (mouse)Not determinedX4006835474068454Mouse
1301009Pbwg7_mpostnatal body weight growth 7 (mouse)Not determinedX4006835474068454Mouse
1300794Spha2_msperm head anomaly 2 (mouse)Not determinedX4083262187216531Mouse
4142200Rtwq1_mreduced testis weight QTL 1 (mouse)Not determined4243170076431843Mouse
1301278Bdln1_mbody length 1 (mouse)Not determinedX4265674676656858Mouse
1300702Fcsa4_mfemoral cross-sectional area 4 (mouse)Not determinedX4698383880983961Mouse
1301212Bw19_mbody weight QTL 19 (mouse)Not determinedX4728804353323450Mouse
4141630Gct6_mgranulosa cell tumorigenesis 6 (mouse)Not determined48090244130864007Mouse
1300853Aggr2_maggression 2 (mouse)Not determinedX4998229053170319Mouse

miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:1771
Count of miRNA genes:704
Interacting mature miRNAs:907
Transcripts:ENSMUST00000088172, ENSMUST00000114871, ENSMUST00000140145, ENSMUST00000142738, ENSMUST00000142983
Prediction methods:Miranda, Pita, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts NM_001077202 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001290467 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001290468 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_015819 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006541516 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006541518 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006541519 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036162004 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036162005 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AB024565 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK031649 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK043774 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK052348 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK083281 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK171680 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AL671918 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AL672057 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AL672099 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC037659 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC047151 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC063327 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BQ031768 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH466570 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: ENSMUST00000088172   ⟹   ENSMUSP00000085497
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 EnsemblX51,387,212 - 51,681,703 (-)Ensembl
RefSeq Acc Id: ENSMUST00000114871   ⟹   ENSMUSP00000110521
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 EnsemblX51,387,212 - 51,681,856 (-)Ensembl
RefSeq Acc Id: ENSMUST00000140145
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 EnsemblX51,680,178 - 51,681,086 (-)Ensembl
RefSeq Acc Id: ENSMUST00000142738
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 EnsemblX51,676,783 - 51,681,348 (-)Ensembl
RefSeq Acc Id: ENSMUST00000142983
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 EnsemblX51,679,992 - 51,680,565 (-)Ensembl
RefSeq Acc Id: NM_001077202   ⟹   NP_001070670
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39X50,475,514 - 50,770,479 (-)NCBI
GRCm38X51,386,637 - 51,681,602 (-)NCBI
MGSCv37X48,740,389 - 49,034,779 (-)RGD
CeleraX38,807,705 - 39,103,506 (-)NCBI
cM MapX ENTREZGENE
Sequence:
RefSeq Acc Id: NM_001290467   ⟹   NP_001277396
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39X50,475,514 - 50,770,479 (-)NCBI
GRCm38X51,386,637 - 51,681,602 (-)NCBI
CeleraX38,807,705 - 39,103,506 (-)NCBI
Sequence:
RefSeq Acc Id: NM_001290468   ⟹   NP_001277397
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39X50,475,514 - 50,769,354 (-)NCBI
GRCm38X51,386,637 - 51,680,477 (-)NCBI
CeleraX38,807,705 - 39,103,506 (-)NCBI
Sequence:
RefSeq Acc Id: NM_015819   ⟹   NP_056634
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39X50,475,514 - 50,769,354 (-)NCBI
GRCm38X51,386,637 - 51,680,477 (-)NCBI
MGSCv37X48,740,389 - 49,034,779 (-)RGD
CeleraX38,807,705 - 39,103,506 (-)NCBI
cM MapX ENTREZGENE
Sequence:
RefSeq Acc Id: XM_006541516   ⟹   XP_006541579
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39X50,476,084 - 50,770,922 (-)NCBI
GRCm38X51,387,207 - 51,681,705 (-)NCBI
Sequence:
RefSeq Acc Id: XM_006541518   ⟹   XP_006541581
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39X50,476,084 - 50,769,502 (-)NCBI
GRCm38X51,387,207 - 51,680,626 (-)NCBI
Sequence:
RefSeq Acc Id: XM_006541519   ⟹   XP_006541582
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39X50,476,084 - 50,769,958 (-)NCBI
GRCm38X51,387,207 - 51,681,081 (-)NCBI
Sequence:
RefSeq Acc Id: XM_036162004   ⟹   XP_036017897
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39X50,476,084 - 50,769,502 (-)NCBI
RefSeq Acc Id: XM_036162005   ⟹   XP_036017898
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39X50,476,084 - 50,769,974 (-)NCBI
Reference Sequences
RefSeq Acc Id: NP_001070670   ⟸   NM_001077202
- Peptide Label: isoform 1
- UniProtKB: Q80UW0 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: NP_056634   ⟸   NM_015819
- Peptide Label: isoform 2 precursor
- UniProtKB: Q80UW0 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: XP_006541579   ⟸   XM_006541516
- Peptide Label: isoform X1
- Sequence:
RefSeq Acc Id: XP_006541582   ⟸   XM_006541519
- Peptide Label: isoform X2
- UniProtKB: Q80UW0 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: XP_006541581   ⟸   XM_006541518
- Peptide Label: isoform X2
- UniProtKB: Q80UW0 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: NP_001277396   ⟸   NM_001290467
- Peptide Label: isoform 3
- UniProtKB: Q80UW0 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: NP_001277397   ⟸   NM_001290468
- Peptide Label: isoform 4 precursor
- UniProtKB: Q80UW0 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: ENSMUSP00000085497   ⟸   ENSMUST00000088172
RefSeq Acc Id: ENSMUSP00000110521   ⟸   ENSMUST00000114871
RefSeq Acc Id: XP_036017898   ⟸   XM_036162005
- Peptide Label: isoform X3
RefSeq Acc Id: XP_036017897   ⟸   XM_036162004
- Peptide Label: isoform X3

Promoters
RGD ID:6845390
Promoter ID:MM_KWN:60280
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:MEF_B4,   MEF_B6
Transcripts:AK013525_2900011F02RIK,   ENSMUST00000114871,   NM_015819,   OTTMUST00000042462,   OTTMUST00000042465,   OTTMUST00000042466,   UC009TDX.1,   UC009TEA.1
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv36X49,032,731 - 49,034,352 (+)MPROMDB
RGD ID:13680448
Promoter ID:EPDNEW_M24373
Type:initiation region
Name:Hs6st2_1
Description:Mus musculus heparan sulfate 6-O-sulfotransferase 2 , transcriptvariant 3, mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38X51,680,392 - 51,680,452EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:1354959 AgrOrtholog
Ensembl Genes ENSMUSG00000062184 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot
Ensembl Protein ENSMUSP00000085497 ENTREZGENE, UniProtKB/Swiss-Prot
  ENSMUSP00000110521 ENTREZGENE, UniProtKB/Swiss-Prot
Ensembl Transcript ENSMUST00000088172 ENTREZGENE, UniProtKB/Swiss-Prot
  ENSMUST00000114871 ENTREZGENE, UniProtKB/Swiss-Prot
InterPro Heparan_SO4-6-sulfoTrfase UniProtKB/Swiss-Prot
  P-loop_NTPase UniProtKB/Swiss-Prot
  Sulfotransferase UniProtKB/Swiss-Prot
KEGG Report mmu:50786 UniProtKB/Swiss-Prot
MGD MGI:1354959 ENTREZGENE
NCBI Gene 50786 ENTREZGENE
PANTHER PTHR12812 UniProtKB/Swiss-Prot
Pfam Sulfotransfer_2 UniProtKB/Swiss-Prot
PhenoGen Hs6st2 PhenoGen
Superfamily-SCOP SSF52540 UniProtKB/Swiss-Prot
UniProt H6ST2_MOUSE UniProtKB/Swiss-Prot, ENTREZGENE
UniProt Secondary A2AEM4 UniProtKB/Swiss-Prot
  Q3TAR0 UniProtKB/Swiss-Prot
  Q6P4N9 UniProtKB/Swiss-Prot
  Q8C785 UniProtKB/Swiss-Prot
  Q9QYK6 UniProtKB/Swiss-Prot