Hoxa7 (homeobox A7) - Rat Genome Database

Name: Hoxa7
Creator: Rat Genome Database
License: Creative Commons CC BY 4.0
Keywords: Rat Gene RGD Genome

Gene: Hoxa7 (homeobox A7) Mus musculus

Analyze

Symbol:

Hoxa7

Name:

homeobox A7

RGD ID:

1557455

MGI Page

MGI

Description:

Enables DNA binding activity and DNA-binding transcription factor activity. Acts upstream of or within several processes, including embryonic skeletal system morphogenesis; regulation of transcription by RNA polymerase II; and stem cell differentiation. Located in nucleus. Is expressed in several structures, including central nervous system; embryo mesenchyme; genitourinary system; gut; and musculoskeletal system. Orthologous to human HOXA7 (homeobox A7).

Type:

protein-coding

RefSeq Status:

VALIDATED

Previously known as:

AV118143; homeo box A7; homeobox protein Hox-1.1; homeobox protein Hox-A7; HOMEOBOX PROTEIN HOX-A7 (HOX-1.1) (M6-12) (M6); homeobox protein M6-12; Hox-1.; Hox-1.1; M6; Mistral

RGD Orthologs

Alliance Genes

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	HOXA7 (homeobox A7)	HGNC	EggNOG, Ensembl, HGNC, HomoloGene, Inparanoid, NCBI, OMA, PhylomeDB, Treefam
Rattus norvegicus (Norway rat):	Hoxa7 (homeobox A7)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chinchilla lanigera (long-tailed chinchilla):	Hoxa7 (homeobox A7)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):	HOXA7 (homeobox A7)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):	Hoxa7 (homeobox A7)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Sus scrofa (pig):	HOXA7 (homeobox A7)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):	LOC103226327 (homeobox protein Hox-A6)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):	Hoxa7 (homeobox A7)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Other homologs ²
Homo sapiens (human):	HOXB7 (homeobox B7)	HGNC	OrthoDB
Alliance orthologs ³
Homo sapiens (human):	HOXA7 (homeobox A7)	Alliance	DIOPT (Ensembl Compara\|HGNC\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Rattus norvegicus (Norway rat):	Hoxa7 (homeobox A7)	Alliance	DIOPT (OrthoFinder\|PhylomeDB)
Drosophila melanogaster (fruit fly):	Antp	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Caenorhabditis elegans (roundworm):	mab-5	Alliance	DIOPT (Ensembl Compara\|InParanoid\|OrthoFinder)
Caenorhabditis elegans (roundworm):	lin-39	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|OrthoInspector)
Xenopus tropicalis (tropical clawed frog):	hoxa7	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)

Latest Assembly:

GRCm39 - Mouse Genome Assembly GRCm39

Position:

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	6	52,191,471 - 52,198,757 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	6	52,191,471 - 52,198,834 (-)	Ensembl		GRCm39 Ensembl
GRCm38	6	52,215,623 - 52,218,573 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	6	52,214,491 - 52,221,854 (-)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	6	52,165,622 - 52,168,572 (-)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	6	52,145,206 - 52,148,156 (-)	NCBI		MGSCv36	mm8
Celera	6	52,737,261 - 52,740,211 (-)	NCBI		Celera
Cytogenetic Map	6	B3	NCBI
cM Map	6	25.4	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

genetic disease (ISO)

pleomorphic xanthoastrocytoma (ISO)

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

1,2-dimethylhydrazine (EXP)

2,3,7,8-tetrachlorodibenzodioxine (EXP,ISO)

2,6-dinitrotoluene (ISO)

2-palmitoylglycerol (ISO)

3-isobutyl-1-methyl-7H-xanthine (ISO)

8'-apo-beta,psi-caroten-8'-al (ISO)

all-trans-retinoic acid (EXP,ISO)

benzalkonium chloride (EXP)

benzo[a]pyrene (ISO)

beta-carotene (ISO)

bisphenol A (EXP)

bisphenol F (EXP,ISO)

cadmium atom (ISO)

cadmium dichloride (ISO)

carbon nanotube (EXP)

chlordecone (EXP)

choline (EXP)

ciguatoxin CTX1B (EXP)

crocidolite asbestos (EXP)

deoxynivalenol (ISO)

dexamethasone (ISO)

folic acid (EXP)

genistein (EXP)

gentamycin (ISO)

hydrogen peroxide (ISO)

indometacin (ISO)

iron dichloride (ISO)

L-methionine (EXP)

lipopolysaccharide (ISO)

nickel atom (ISO)

paracetamol (ISO)

phenobarbital (ISO)

S-(1,2-dichlorovinyl)-L-cysteine (ISO)

silver atom (EXP)

silver(0) (EXP)

testosterone enanthate (ISO)

titanium dioxide (EXP)

tremolite asbestos (EXP)

triptonide (EXP)

valproic acid (ISO)

vitamin E (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

angiogenesis (ISO)

anterior/posterior pattern specification (IBA,IGI)

embryonic skeletal system morphogenesis (IGI)

negative regulation of cell-matrix adhesion (ISO)

negative regulation of DNA-templated transcription (ISO)

negative regulation of keratinocyte differentiation (ISO)

negative regulation of leukocyte migration (ISO)

negative regulation of monocyte differentiation (ISO)

negative regulation of transcription by RNA polymerase II (IDA,ISO)

positive regulation of transcription by RNA polymerase II (IDA,ISO)

regulation of DNA-templated transcription (IDA)

regulation of transcription by RNA polymerase II (IBA)

stem cell differentiation (IDA)

Cellular Component

nuclear membrane (ISO)

nucleoplasm (ISO)

nucleus (IBA,IDA)

Molecular Function

DNA binding (IDA)

DNA-binding transcription activator activity, RNA polymerase II-specific (ISO)

DNA-binding transcription factor activity (IDA)

DNA-binding transcription factor activity, RNA polymerase II-specific (IBA)

DNA-binding transcription factor binding (ISO)

protein binding (ISO)

RNA polymerase II cis-regulatory region sequence-specific DNA binding (IBA,ISO)

sequence-specific DNA binding (ISO)

sequence-specific double-stranded DNA binding (ISO)

Phenotype Annotations Click to see Annotation Detail View

Mammalian Phenotype

no abnormal phenotype detected (IAGP)

rib fusion (IAGP)

small thymus (IAGP)

References

References - curated

#	Reference Title	Reference Citation
1.	MGDs mouse GO annotations	MGD data from the GO Consortium
2.	MGD IEA	MGD IEA
3.	Organization, sequence and regulation of expression of the murine Hoxa-7 gene.	Parikh H, etal., Gene 1995 Mar 10;154(2):237-42.
4.	Mouse MP Annotation Import Pipeline	RGD automated import pipeline
5.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions

Additional References at PubMed

PMID:1348361	PMID:1349539	PMID:1358459	PMID:1358593	PMID:1505477	PMID:1659665	PMID:1680565	PMID:1971214	PMID:2416462	PMID:2563901	PMID:2568891	PMID:2575552
PMID:2877873	PMID:2878803	PMID:2885847	PMID:2890554	PMID:2986010	PMID:7477409	PMID:7538068	PMID:7585967	PMID:7680626	PMID:7905852	PMID:7911971	PMID:7954431
PMID:8099712	PMID:8235442	PMID:8264592	PMID:8563752	PMID:8565825	PMID:8625838	PMID:8649375	PMID:8833244	PMID:8887324	PMID:8982060	PMID:9291463	PMID:9367423
PMID:9407586	PMID:9415485	PMID:9639506	PMID:9724755	PMID:9784603	PMID:10349636	PMID:10354475	PMID:10633854	PMID:11042159	PMID:11076861	PMID:11217851	PMID:11357191
PMID:11435435	PMID:12015293	PMID:12068955	PMID:12082612	PMID:12370779	PMID:12466851	PMID:12477932	PMID:12549822	PMID:14973489	PMID:15042701	PMID:15070702	PMID:15470633
PMID:15618518	PMID:15680324	PMID:16141072	PMID:16141073	PMID:16467359	PMID:16602821	PMID:16618927	PMID:16888613	PMID:16971476	PMID:16981007	PMID:17535249	PMID:17726103
PMID:18287559	PMID:18617636	PMID:18952892	PMID:19204410	PMID:19346496	PMID:19796622	PMID:19833123	PMID:20059953	PMID:20417598	PMID:20573702	PMID:20826310	PMID:20971928
PMID:21112873	PMID:21267068	PMID:21518888	PMID:21529712	PMID:21677750	PMID:21873635	PMID:22219351	PMID:22701719	PMID:22972626	PMID:23359544	PMID:23843306	PMID:24146773
PMID:24525295	PMID:24952961	PMID:25099890	PMID:26238476	PMID:26283362	PMID:27554164	PMID:28041967	PMID:28188179	PMID:30992047	PMID:32479258	PMID:33257809	PMID:34108202
PMID:35315772

Genomics

Comparative Map Data

Hoxa7
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	6	52,191,471 - 52,198,757 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	6	52,191,471 - 52,198,834 (-)	Ensembl		GRCm39 Ensembl
GRCm38	6	52,215,623 - 52,218,573 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	6	52,214,491 - 52,221,854 (-)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	6	52,165,622 - 52,168,572 (-)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	6	52,145,206 - 52,148,156 (-)	NCBI		MGSCv36	mm8
Celera	6	52,737,261 - 52,740,211 (-)	NCBI		Celera
Cytogenetic Map	6	B3	NCBI
cM Map	6	25.4	NCBI

HOXA7
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	7	27,153,716 - 27,156,675 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	7	27,153,716 - 27,157,936 (-)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	7	27,193,335 - 27,196,294 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	7	27,159,860 - 27,162,821 (-)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	7	26,967,529 - 26,969,536	NCBI
Celera	7	27,182,274 - 27,185,235 (-)	NCBI		Celera
Cytogenetic Map	7	p15.2	NCBI
HuRef	7	27,073,747 - 27,076,708 (-)	NCBI		HuRef
CHM1_1	7	27,193,051 - 27,196,012 (-)	NCBI		CHM1_1
T2T-CHM13v2.0	7	27,289,707 - 27,297,085 (-)	NCBI		T2T-CHM13v2.0
CRA_TCAGchr7v2	7	27,244,510 - 27,247,471 (-)	NCBI

Hoxa7
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	4	82,646,342 - 82,652,449 (-)	NCBI		GRCr8
mRatBN7.2	4	81,315,730 - 81,317,629 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	4	81,314,625 - 81,317,659 (-)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	4	86,537,519 - 86,539,409 (-)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	4	82,312,905 - 82,314,795 (-)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	4	80,740,052 - 80,741,942 (-)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	4	82,184,299 - 82,187,890 (-)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	4	82,183,196 - 82,186,190 (-)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	4	146,851,130 - 146,854,687 (-)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	4	80,515,622 - 80,517,521 (-)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
Celera	4	76,206,442 - 76,208,341 (-)	NCBI		Celera
Cytogenetic Map	4	q24	NCBI

Hoxa7
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955410	28,847,893 - 28,851,062 (-)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955410	28,848,029 - 28,851,069 (-)	NCBI	ChiLan1.0	ChiLan1.0

HOXA7
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	6	31,982,932 - 31,987,550 (-)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	7	80,308,768 - 80,310,610 (-)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	7	27,799,317 - 27,802,492 (-)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	7	27,397,888 - 27,402,142 (-)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	7	27,396,898 - 27,402,142 (-)	Ensembl	panpan1.1		panPan2

Hoxa7
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024405118	84,569,675 - 84,572,760 (-)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936478	3,782,482 - 3,784,361 (-)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936478	3,782,476 - 3,784,361 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

HOXA7
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	18	45,417,203 - 45,419,101 (+)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	18	45,417,137 - 45,419,113 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	18	50,047,209 - 50,052,308 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

LOC103226327
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	21	31,208,988 - 31,215,227 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	21	31,221,230 - 31,223,278 (+)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
ChlSab1.1 Ensembl	21	31,212,209 - 31,215,392 (+)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666042	73,509,101 - 73,524,828 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Hoxa7
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624739	3,448,199 - 3,452,717 (+)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624739	3,448,982 - 3,451,985 (+)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Variants

Variants in Hoxa7
137 total Variants

miRNA Target Status

Predicted Target Of

	Summary Value
Count of predictions:	1699
Count of miRNA genes:	616
Interacting mature miRNAs:	773
Transcripts:	ENSMUST00000048715, ENSMUST00000134367, ENSMUST00000140316, ENSMUST00000150041, ENSMUST00000153280
Prediction methods:	Miranda, Rnahybrid, Targetscan
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

QTLs in Region (GRCm39)

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
25440480	Moaq2_m	modifier of alien QTL 2 (mouse)					6	3050001	117476961	Mouse
26884414	Bzwq12_m	bi-zygomatic width QTL 12, 16 week (mouse)					6	3400000	139076998	Mouse
1300556	Cia6_m	collagen induced arthritis QTL 6 (mouse)			Not determined		6	4464884	87403016	Mouse
4142271	Egq8_m	early growth QTL 8 (mouse)			Not determined			4503823	96633110	Mouse
4142232	W6q4_m	weight 6 weeks QTL 4 (mouse)			Not determined			4503823	96633110	Mouse
4142126	W3q3_m	weight 3 weeks QTL 3 (mouse)			Not determined			4503823	96633110	Mouse
4142361	W10q11_m	weight 10 weeks QTL 11 (mouse)			Not determined			4503823	96633110	Mouse
26884441	Sklq3_m	skull length QTL 3, 5 week (mouse)					6	7600000	80576983	Mouse
27226726	Tibmd7_m	tibia midshaft diameter 7, 16 week (mouse)					6	17699999	53476985	Mouse
1357442	Dbts1_m	diabetes 1 (mouse)			Not determined		6	18234147	73364675	Mouse
12904940	Edlmmq5_m	extensor digitorum longus muscle mass QTL 5 (mouse)					6	19616346	53616346	Mouse
12904943	Tammq4_m	tibialis anterior muscle mass QTL 4 (mouse)					6	19616346	53616346	Mouse
12904952	Gmmq4_m	gastrocnemius muscle mass QTL 4 (mouse)					6	19616346	53616346	Mouse
10412213	Sxbq2_m	SGC/Knj cross B6 QTL 2 (mouse)			Not determined		6	19912685	71299759	Mouse
10412107	Desp4_m	despair 4 (mouse)			Not determined		6	20049830	54049830	Mouse
14700690	Ccs6_m	colon cancer susceptibility 6 (mouse)					6	23776934	57776934	Mouse
13208564	Bmiq7_m	body mass index QTL 7 (mouse)					6	24999999	79976983	Mouse
4141988	Obrq3_m	obesity resistance QTL 3 (mouse)			Not determined			28290993	62291115	Mouse
4141454	Obrq4_m	obesity resistance QTL 4 (mouse)			Not determined			31703499	65703611	Mouse
12880425	V25Dq5_m	vitamin D inactive form serum level QTL 5 (mouse)					6	32676980	66676980	Mouse
4141782	Mrdq5_m	modifier of retinal degeneration QTL 5 (mouse)			Not determined			32827585	78215957	Mouse
1300959	Lxw2_m	lupus BXSB x NZW 2 (mouse)			Not determined		6	33872261	67872400	Mouse
11252142	Mom12_m	Modifier of Min 12 (mouse)					6	33872261	67872400	Mouse
1300767	Aliq4_m	acute lung injury QTL 4 (mouse)			Not determined		6	36273332	70273435	Mouse
1357539	Bsbob3_m	BSB obesity 3 (mouse)			Not determined		6	36448456	70448576	Mouse
4141094	Hrtr1_m	heart rate 1 (mouse)			Not determined			36741463	70741463	Mouse
14746995	Manh60_m	mandible shape 60 (mouse)					6	37202662	71202662	Mouse
1558984	Cplaq9_m	circadian period of locomotor activity 9 (mouse)			Not determined		6	38646560	92584431	Mouse
1301326	Trbv4c2_m	T cell receptor beta variable 4 (mouse)			Not determined		6	40868230	71356155	Mouse
12880424	V25Dq4_m	vitamin D inactive form serum level QTL 4 (mouse)					6	41576985	75576985	Mouse
11040600	Lmr4c_m	leishmaniasis resistance 4c (mouse)					6	42093358	76093500	Mouse
11040601	Lmr4a_m	leishmaniasis resistance 4a (mouse)					6	42093358	76093500	Mouse
11533915	Mts4_m	mammary tumor susceptibility 4 (mouse)					6	42093358	76093500	Mouse
1301266	Lmr4_m	leishmaniasis resistance 4 (mouse)			Not determined		6	42093358	76093500	Mouse
12910785	Pwgrq16_m	post-weaning growth rate QTL 16 (mouse)					6	43803747	77788506	Mouse
12910798	Pwgrq5_m	pre-weaning growth rate QTL 5 (mouse)					6	43803747	77788506	Mouse
12910802	Pwbwq12_m	post-weaning body weight QTL 12 (mouse)					6	43803747	77788506	Mouse
12910807	Pwbwq11_m	post-weaning body weight QTL 11 (mouse)					6	43803747	77788506	Mouse
12910809	Pwbwq10_m	post-weaning body weight QTL 10 (mouse)					6	43803747	77788506	Mouse
12910820	Ogrq3_m	overall growth rate QTL 3 (mouse)					6	43803747	77788506	Mouse
10043885	Cia6c_m	collagen induced arthritis QTL 6c (mouse)			Not determined		6	44442805	71096451	Mouse
1300618	Pgia19_m	proteoglycan induced arthritis 19 (mouse)			Not determined		6	45290993	87403016	Mouse
10412157	Fl1n_m	fatty liver 1 in NSY (mouse)			Not determined		6	45290993	128811995	Mouse
4142259	Tabw2_m	tally ho associated body weight 2 (mouse)			Not determined			46912919	136400690	Mouse
25314319	Histh6_m	histamine hypersensitivity 6 (mouse)					6	48696934	125336963	Mouse
25314320	Histh5_m	histamine hypersensitivity 5 (mouse)					6	48696934	148351498	Mouse
4140983	Srilp_m	sleep response to influenza, light phase (mouse)			Not determined			48703490	75424693	Mouse
1301962	Eila2_m	ethanol induced locomotor activity 2 (mouse)			Not determined		6	48703490	125333748	Mouse
1301254	Skts11_m	skin tumor susceptibility 11 (mouse)			Not determined		6	51156134	85156284	Mouse
14696807	Rbcn2_m	rod bipolar cell number 2 (mouse)					6	51186980	56186985	Mouse
1357683	Igf1sl1_m	IGF-1 serum levels 1 (mouse)			Not determined		6	52138693	116132228	Mouse

Markers in Region

RH135228

Mouse Assembly	Chr	Position (strand)	Source	JBrowse
GRCm38	6	52,215,680 - 52,215,865	UniSTS	GRCm38
MGSCv37	6	52,165,679 - 52,165,864	UniSTS	GRCm37
Celera	6	52,737,318 - 52,737,503	UniSTS
Cytogenetic Map	6	B3	UniSTS
cM Map	6	26.3	UniSTS

REN100580

Mouse Assembly	Chr	Position (strand)	Source	JBrowse
GRCm38	6	52,217,303 - 52,217,527	UniSTS	GRCm38
MGSCv37	6	52,167,302 - 52,167,526	UniSTS	GRCm37
Celera	6	52,738,941 - 52,739,165	UniSTS
Cytogenetic Map	6	B3	UniSTS
cM Map	6	26.3	UniSTS

Hoxa7

Mouse Assembly	Chr	Position (strand)	Source	JBrowse
GRCm38	6	52,215,680 - 52,215,902	UniSTS	GRCm38
MGSCv37	6	52,165,679 - 52,165,901	UniSTS	GRCm37
Celera	6	52,737,318 - 52,737,540	UniSTS
Cytogenetic Map	6	B3	UniSTS
cM Map	6	26.3	UniSTS

Hoxa7

Mouse Assembly	Chr	Position (strand)	Source	JBrowse
GRCm38	6	52,217,044 - 52,217,342	UniSTS	GRCm38
MGSCv37	6	52,167,043 - 52,167,341	UniSTS	GRCm37
Celera	6	52,738,682 - 52,738,980	UniSTS
Cytogenetic Map	6	B3	UniSTS
cM Map	6	26.3	UniSTS

Hoxa7

Mouse Assembly	Chr	Position (strand)	Source	JBrowse
Cytogenetic Map	6	B3	UniSTS
cM Map	6	26.3	UniSTS

Hoxa7

Mouse Assembly	Chr	Position (strand)	Source	JBrowse
Cytogenetic Map	6	B3	UniSTS
cM Map	6	26.3	UniSTS

Hoxa7

Mouse Assembly	Chr	Position (strand)	Source	JBrowse
Cytogenetic Map	6	B3	UniSTS
cM Map	6	26.3	UniSTS

Expression

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_001419267	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001419268	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001419269	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001419270	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001419271	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001419272	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001419273	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001419274	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001419276	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001419277	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001419278	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001419279	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_010455	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AC015583	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK033500	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BC036986	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BC131978	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BC132643	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CH466597	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	M17192	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	U15972	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	U16155	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	X02399	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

RefSeq Acc Id:

ENSMUST00000048715 ⟹ ENSMUSP00000048648

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	6	52,191,478 - 52,194,485 (-)	Ensembl
GRCm38.p6 Ensembl	6	52,214,498 - 52,217,505 (-)	Ensembl

RefSeq Acc Id:

ENSMUST00000134367 ⟹ ENSMUSP00000134610

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	6	52,192,733 - 52,195,691 (-)	Ensembl
GRCm38.p6 Ensembl	6	52,215,753 - 52,218,711 (-)	Ensembl

RefSeq Acc Id:

ENSMUST00000140316 ⟹ ENSMUSP00000138790

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	6	52,193,420 - 52,194,432 (-)	Ensembl
GRCm38.p6 Ensembl	6	52,216,440 - 52,217,452 (-)	Ensembl

RefSeq Acc Id:

ENSMUST00000150041 ⟹ ENSMUSP00000140519

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	6	52,192,989 - 52,198,834 (-)	Ensembl
GRCm38.p6 Ensembl	6	52,216,009 - 52,221,854 (-)	Ensembl

RefSeq Acc Id:

ENSMUST00000153280 ⟹ ENSMUSP00000134641

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	6	52,191,471 - 52,197,373 (-)	Ensembl
GRCm38.p6 Ensembl	6	52,214,491 - 52,220,393 (-)	Ensembl

RefSeq Acc Id:

NM_001419267 ⟹ NP_001406196

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39	6	52,191,471 - 52,198,568 (-)	NCBI

RefSeq Acc Id:

NM_001419268 ⟹ NP_001406197

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39	6	52,191,471 - 52,198,757 (-)	NCBI

RefSeq Acc Id:

NM_001419269 ⟹ NP_001406198

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39	6	52,191,471 - 52,195,684 (-)	NCBI

RefSeq Acc Id:

NM_001419270 ⟹ NP_001406199

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39	6	52,191,471 - 52,198,757 (-)	NCBI

RefSeq Acc Id:

NM_001419271 ⟹ NP_001406200

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39	6	52,191,471 - 52,194,462 (-)	NCBI

RefSeq Acc Id:

NM_001419272 ⟹ NP_001406201

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39	6	52,191,471 - 52,194,462 (-)	NCBI

RefSeq Acc Id:

NM_001419273 ⟹ NP_001406202

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39	6	52,191,471 - 52,198,568 (-)	NCBI

RefSeq Acc Id:

NM_001419274 ⟹ NP_001406203

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39	6	52,191,471 - 52,198,568 (-)	NCBI

RefSeq Acc Id:

NM_001419276 ⟹ NP_001406205

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39	6	52,191,471 - 52,198,757 (-)	NCBI

RefSeq Acc Id:

NM_001419277 ⟹ NP_001406206

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39	6	52,191,471 - 52,198,757 (-)	NCBI

RefSeq Acc Id:

NM_001419278 ⟹ NP_001406207

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39	6	52,191,471 - 52,198,757 (-)	NCBI

RefSeq Acc Id:

NM_001419279 ⟹ NP_001406208

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39	6	52,191,471 - 52,195,684 (-)	NCBI

RefSeq Acc Id:

NM_010455 ⟹ NP_034585

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39	6	52,191,471 - 52,194,462 (-)	NCBI
GRCm38	6	52,215,623 - 52,218,573 (-)	NCBI
MGSCv37	6	52,165,622 - 52,168,572 (-)	RGD
Celera	6	52,737,261 - 52,740,211 (-)	RGD
cM Map	6		ENTREZGENE

Sequence:

show sequence

AGTGCTTAGAAAGGTGAAGCCGCGGGATCTGGGTGGCCCCTAGAAAGGGCTCCCTTATTCGCTT
TTATTGTCTCCTAAAGAACTGGGGTTCCACAATGAGCTACAGCACCCAGGTCCTGAGATTACCT
CTCCTGTCTCTAATCCAGCTCTAAAACTGTTACCGGCCCACAGGGTGGAAGGCTTGCTTGCCTG
AGAGCCGCCAGGAGTGTATGACGGATGTGTTTTAAAATTTGTGGAGCCGAGTTTCTCCCAAACT
GAATGAGGATACCCCAGTTTTTTGTCATCTAGGGGGTAACTAGGGGTTGTGGCAAGGACAAAGC
GGGTGTTGAGCTATCTCTGGAGTTGCTGCCAGCCAGCCAGGTGCCCAGGAGCAAATGCAGAGAA
ACTGCCAGGGCCGCAGTGTCCGGGAGGAGAAAAGGAATCCCATGTTAGTATATCTGTTGGCAAA
TGAGGCTCATTAATAGATAAATATTTCACTGCTTCCTTTAGGGCAGATAAACAGTGCGCCGCCG
ATTAAAGAAAGGAAGCTGAGAGACGTTGACTTTATTCGAACCACATGGTTCCAGTTTGTGGCAG
CGGTCTCTCCGCTCGGCTAGAGGAGACACCGCGCCTGCGGTGTTGGCGCTGGAGCATCAAATCA
GGTCTTAAAGGTTTCCCTGCTTATAGAGAGAGGTGGGCAAAGAGTGGATTTCCCTCTCTAGACC
ATCTTTGGGCGGACAGGTTACAGAGACCCTGGGTCTTGGACCCTCAGAGAGGGCCCGAACAGGG
GGAATCCACACAGTGGATCTGGGGTTCAGGAATAGGTATGAGGTTGTCGGGGGAGGGGGCGAGA
TCCCTGCCTCCAGGCTTCGGCGGCTGGGACGGGGCTCTGGCGGAGCCTAGGGGTCTGATTGCGT
CGGGCGCCCTGGCAGCCCGGTGCAGGCAGGCCGCGTCTGTGAGCCTCTTCCCCTTCCATTCTAG
GAGGCAGGCGGCCCGTGGCGCGGGACCACCTGTGAGGGCTGCTGAGATTGGCGGAGGCGGTCAT
GTGGGCGGTCACGTGCCGCGGCGAGCTCCGTCCAAAAGAAAATGGGGTTTGGTGTAAATCTGGG
GGTGTAATGTTATCATATATCACGCTACCTCGTAAAACCGACACTGAAAGCTGCCGGACAACAA
ATCACAGGTCAAAATTATGAGTTCTTCGTATTATGTGAACGCGCTTTTTAGCAAATATACGGCG
GGGGCTTCTCTCTTCCAAAATGCCGAGCCGACTTCTTGCTCCTTTGCACCCAACTCGCAGAGAA
GCGGCTACGGGCCGGGCGCCGGCGCCTTCGCCTCCACTGTGCCGGGCTTATACAATGTCAACAG
CCCCCTCTATCAGAGCCCCTTCGCGTCCGGCTATGGCCTGGGAGCCGACGCCTACAACCTGCCC
TGCGCCTCCTACGACCAAAACATCCCCGGGCTCTGCAGTGACCTCGCCAAAGGCGCCTGCGACA
AGGCGGACGAGGGCGTGCTTCACGGCCCGGCCGAAGCCAGTTTCCGCATCTACCCCTGGATGCG
CAGTTCAGGACCCGACAGGAAGCGGGGACGCCAGACCTACACGCGCTACCAGACGCTGGAACTG
GAGAAGGAATTCCATTTCAACCGCTACCTGACGCGGCGCCGCCGCATCGAGATCGCTCACGCGC
TCTGCCTCACTGAGCGCCAGATCAAGATCTGGTTCCAGAATCGGCGCATGAAGTGGAAGAAAGA
GCATAAAGATGAGAGCCAGGCTCCCACTGCAGCCCCGGAAGACGCGGTGCCCTCCGTTTCCACA
GCTGCTGACAAGGCGGACGAGGAGGAAGAGGAGGAAGAGGAGGAAGAAGAGGAGGAAGAGGAGT
AAAGGGCCAGGCACAGGACCCTGGCTGCACAGGACAGTTGGAAAAGCGTCTTTAAGAGACTCAT
TGATTTTAGTTACAAAAATGGGGGGAAATAAA

hide sequence

Protein Sequences


Protein RefSeqs	NP_001406196	(Get FASTA)	NCBI Sequence Viewer
	NP_001406197	(Get FASTA)	NCBI Sequence Viewer
	NP_001406198	(Get FASTA)	NCBI Sequence Viewer
	NP_001406199	(Get FASTA)	NCBI Sequence Viewer
	NP_001406200	(Get FASTA)	NCBI Sequence Viewer
	NP_001406201	(Get FASTA)	NCBI Sequence Viewer
	NP_001406202	(Get FASTA)	NCBI Sequence Viewer
	NP_001406203	(Get FASTA)	NCBI Sequence Viewer
	NP_001406205	(Get FASTA)	NCBI Sequence Viewer
	NP_001406206	(Get FASTA)	NCBI Sequence Viewer
	NP_001406207	(Get FASTA)	NCBI Sequence Viewer
	NP_001406208	(Get FASTA)	NCBI Sequence Viewer
	NP_034585	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	AAA37833	(Get FASTA)	NCBI Sequence Viewer
	AAC52160	(Get FASTA)	NCBI Sequence Viewer
	AAH36986	(Get FASTA)	NCBI Sequence Viewer
	AAI31979	(Get FASTA)	NCBI Sequence Viewer
	AAI32644	(Get FASTA)	NCBI Sequence Viewer
	BAC28323	(Get FASTA)	NCBI Sequence Viewer
	EDK98660	(Get FASTA)	NCBI Sequence Viewer
	EDK98661	(Get FASTA)	NCBI Sequence Viewer
	EDK98662	(Get FASTA)	NCBI Sequence Viewer
	EDK98663	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSMUSP00000048648
	ENSMUSP00000048648.7
	ENSMUSP00000134610.3
	ENSMUSP00000134641.3
	ENSMUSP00000138790
	ENSMUSP00000138790.2
	ENSMUSP00000140519.2
GenBank Protein	P02830	(Get FASTA)	NCBI Sequence Viewer

RefSeq Acc Id:	NP_034585 ⟸ NM_010455
- Peptide Label:	isoform 1
- UniProtKB:	A2RS54 (UniProtKB/Swiss-Prot), Q544P0 (UniProtKB/Swiss-Prot), P02830 (UniProtKB/Swiss-Prot)
- Sequence:	show sequence MSSSYYVNALFSKYTAGASLFQNAEPTSCSFAPNSQRSGYGPGAGAFASTVPGLYNVNSPLYQS PFASGYGLGADAYNLPCASYDQNIPGLCSDLAKGACDKADEGVLHGPAEASFRIYPWMRSSGPD RKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKEHKDES QAPTAAPEDAVPSVSTAADKADEEEEEEEEEEEEEEE hide sequence

RefSeq Acc Id:

ENSMUSP00000140519 ⟸ ENSMUST00000150041

RefSeq Acc Id:

ENSMUSP00000048648 ⟸ ENSMUST00000048715

RefSeq Acc Id:

ENSMUSP00000138790 ⟸ ENSMUST00000140316

RefSeq Acc Id:

ENSMUSP00000134610 ⟸ ENSMUST00000134367

RefSeq Acc Id:

ENSMUSP00000134641 ⟸ ENSMUST00000153280

RefSeq Acc Id:	NP_001406206 ⟸ NM_001419277
- Peptide Label:	isoform 5
- UniProtKB:	Q8JZW2 (UniProtKB/TrEMBL)

RefSeq Acc Id:	NP_001406199 ⟸ NM_001419270
- Peptide Label:	isoform 2

RefSeq Acc Id:	NP_001406207 ⟸ NM_001419278
- Peptide Label:	isoform 5
- UniProtKB:	Q8JZW2 (UniProtKB/TrEMBL)

RefSeq Acc Id:	NP_001406205 ⟸ NM_001419276
- Peptide Label:	isoform 5
- UniProtKB:	Q8JZW2 (UniProtKB/TrEMBL)

RefSeq Acc Id:	NP_001406197 ⟸ NM_001419268
- Peptide Label:	isoform 1
- UniProtKB:	P02830 (UniProtKB/Swiss-Prot), A2RS54 (UniProtKB/Swiss-Prot), Q544P0 (UniProtKB/Swiss-Prot)

RefSeq Acc Id:	NP_001406202 ⟸ NM_001419273
- Peptide Label:	isoform 5
- UniProtKB:	Q8JZW2 (UniProtKB/TrEMBL)

RefSeq Acc Id:	NP_001406203 ⟸ NM_001419274
- Peptide Label:	isoform 5
- UniProtKB:	Q8JZW2 (UniProtKB/TrEMBL)

RefSeq Acc Id:	NP_001406196 ⟸ NM_001419267
- Peptide Label:	isoform 1
- UniProtKB:	P02830 (UniProtKB/Swiss-Prot), A2RS54 (UniProtKB/Swiss-Prot), Q544P0 (UniProtKB/Swiss-Prot)

RefSeq Acc Id:	NP_001406208 ⟸ NM_001419279
- Peptide Label:	isoform 5
- UniProtKB:	Q8JZW2 (UniProtKB/TrEMBL)

RefSeq Acc Id:	NP_001406198 ⟸ NM_001419269
- Peptide Label:	isoform 1
- UniProtKB:	P02830 (UniProtKB/Swiss-Prot), A2RS54 (UniProtKB/Swiss-Prot), Q544P0 (UniProtKB/Swiss-Prot)

RefSeq Acc Id:	NP_001406200 ⟸ NM_001419271
- Peptide Label:	isoform 3

RefSeq Acc Id:	NP_001406201 ⟸ NM_001419272
- Peptide Label:	isoform 4
- UniProtKB:	S4R2U5 (UniProtKB/TrEMBL)

Protein Domains

Homeobox

Protein Structures

Name	Modeler	Protein Id	AA Range	Protein Structure
AF-P02830-F1-model_v2	AlphaFold	P02830	1-229	view protein structure

Promoters

RGD ID:

6839463

Promoter ID:

MM_KWN:46016

Type:

CpG-Island

SO ACC ID:

SO:0000170

Source:

MPROMDB

Tissues & Cell Lines:

3T3L1_Day0, 3T3L1_Day1, 3T3L1_Day2, 3T3L1_Day3, 3T3L1_Day4, Kidney, Lung

Transcripts:

OTTMUST00000045382, OTTMUST00000045385

Position:

Mouse Assembly	Chr	Position (strand)	Source
MGSCv36	6	52,167,111 - 52,167,737 (-)	MPROMDB

RGD ID:

6839461

Promoter ID:

MM_KWN:46017

Type:

CpG-Island

SO ACC ID:

SO:0000170

Source:

MPROMDB

Tissues & Cell Lines:

Kidney

Transcripts:

OTTMUST00000045384

Position:

Mouse Assembly	Chr	Position (strand)	Source
MGSCv36	6	52,168,531 - 52,169,532 (-)	MPROMDB

RGD ID:

6839462

Promoter ID:

MM_KWN:46018

Type:

CpG-Island

SO ACC ID:

SO:0000170

Source:

MPROMDB

Tissues & Cell Lines:

Kidney, Lung

Transcripts:

OTTMUST00000045383

Position:

Mouse Assembly	Chr	Position (strand)	Source
MGSCv36	6	52,170,131 - 52,170,737 (-)	MPROMDB

RGD ID:

6839464

Promoter ID:

MM_KWN:46019

Type:

CpG-Island

SO ACC ID:

SO:0000170

Source:

MPROMDB

Tissues & Cell Lines:

3T3L1_Day0, Brain, Kidney, Lung, MEF_B4, MEF_B6

Transcripts:

OTTMUST00000045386

Position:

Mouse Assembly	Chr	Position (strand)	Source
MGSCv36	6	52,171,486 - 52,172,317 (-)	MPROMDB

Additional Information

External Database Links

Database	Acc Id	Source(s)
AGR Gene	MGI:96179	AgrOrtholog
Ensembl Genes	ENSMUSG00000038236	Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Ensembl Transcript	ENSMUST00000048715	ENTREZGENE
	ENSMUST00000048715.9	UniProtKB/Swiss-Prot
	ENSMUST00000134367.4	UniProtKB/TrEMBL
	ENSMUST00000140316	ENTREZGENE
	ENSMUST00000140316.2	UniProtKB/TrEMBL
	ENSMUST00000150041.4	UniProtKB/TrEMBL
	ENSMUST00000153280.2	UniProtKB/TrEMBL
Gene3D-CATH	Homeodomain-like	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
InterPro	Homeobox-like_sf	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	Homeobox_antennapedia	UniProtKB/Swiss-Prot
	Homeobox_Antennapedia_CS	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	Homeobox_CS	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	Homeobox_dom	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	Homeobox_metazoa	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report	mmu:15404	UniProtKB/Swiss-Prot
MGD	MGI:96179	ENTREZGENE
NCBI Gene	15404	ENTREZGENE
PANTHER	HOMEOBOX PROTEIN HOX	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	HOMEOBOX PROTEIN HOX-A7	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam	Homeodomain	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen	Hoxa7	PhenoGen
PRINTS	ANTENNAPEDIA	UniProtKB/Swiss-Prot
	HOMEOBOX	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PROSITE	ANTENNAPEDIA	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	HOMEOBOX_1	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	HOMEOBOX_2	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
SMART	HOX	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Superfamily-SCOP	SSF46689	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt	A0A087WR88_MOUSE	UniProtKB/TrEMBL
	A2RS54	ENTREZGENE
	G3UZS1_MOUSE	UniProtKB/TrEMBL
	G3UZU9_MOUSE	UniProtKB/TrEMBL
	HXA7_MOUSE	UniProtKB/Swiss-Prot, ENTREZGENE
	Q544P0	ENTREZGENE
	Q8JZW2	ENTREZGENE, UniProtKB/TrEMBL
	S4R2U5	ENTREZGENE, UniProtKB/TrEMBL
UniProt Secondary	A2RS54	UniProtKB/Swiss-Prot
	Q544P0	UniProtKB/Swiss-Prot

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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Imported Disease Annotations - ClinVar

Mammalian Phenotype