Vps13c (vacuolar protein sorting 13C) - Rat Genome Database

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Gene: Vps13c (vacuolar protein sorting 13C) Mus musculus
Analyze
Symbol: Vps13c
Name: vacuolar protein sorting 13C
RGD ID: 1557361
MGI Page MGI
Description: Acts upstream of or within response to insulin. Located in dense core granule membrane. Is expressed in several structures, including central nervous system; genitourinary system; gut; immune system; and skeleton. Human ortholog(s) of this gene implicated in Parkinson's disease 23. Orthologous to human VPS13C (vacuolar protein sorting 13 homolog C); INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine; 4,4'-diaminodiphenylmethane; triptonide.
Type: protein-coding
RefSeq Status: VALIDATED
Also known as: AI552542; AV026040; C230055H22Rik; chorein; vacuolar protein sorting 13C (yeast); vacuolar protein sorting-associated protein 13C; vps13c 5' variant II; vps13c 5' variant III; Vps13c 5' variant VI; W51662
RGD Orthologs
Human
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: GRCm38 - Mouse Genome Assembly GRCm38
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39967,747,594 - 67,905,026 (+)NCBIGRCm39mm39
GRCm39 Ensembl967,747,678 - 67,902,920 (+)Ensembl
GRCm38967,840,316 - 67,997,744 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl967,840,396 - 67,995,638 (+)EnsemblGRCm38mm10GRCm38
MGSCv37967,688,203 - 67,843,441 (+)NCBIGRCm37mm9NCBIm37
MGSCv36967,639,567 - 67,796,023 (+)NCBImm8
MGSCv36968,440,120 - 68,593,896 (+)NCBImm8
Celera965,070,042 - 65,224,890 (+)NCBICelera
Cytogenetic Map9CNCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Molecular Function

References

Additional References at PubMed
PMID:8889548   PMID:10349636   PMID:11042159   PMID:11076861   PMID:11217851   PMID:12520002   PMID:12904583   PMID:14621295   PMID:16141072   PMID:16141073   PMID:16602821   PMID:17188237  
PMID:17196930   PMID:21267068   PMID:21565611   PMID:21873635   PMID:23055939   PMID:24194600   PMID:24457600   PMID:25838543   PMID:27329800   PMID:27626380   PMID:27984743   PMID:29175050  
PMID:30409884   PMID:30995482   PMID:32325033   PMID:32581705  


Genomics

Comparative Map Data
Vps13c
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39967,747,594 - 67,905,026 (+)NCBIGRCm39mm39
GRCm39 Ensembl967,747,678 - 67,902,920 (+)Ensembl
GRCm38967,840,316 - 67,997,744 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl967,840,396 - 67,995,638 (+)EnsemblGRCm38mm10GRCm38
MGSCv37967,688,203 - 67,843,441 (+)NCBIGRCm37mm9NCBIm37
MGSCv36967,639,567 - 67,796,023 (+)NCBImm8
MGSCv36968,440,120 - 68,593,896 (+)NCBImm8
Celera965,070,042 - 65,224,890 (+)NCBICelera
Cytogenetic Map9CNCBI
VPS13C
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38.p13 Ensembl1561,852,389 - 62,060,473 (-)EnsemblGRCh38hg38GRCh38
GRCh381561,852,389 - 62,060,447 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh371562,144,588 - 62,352,646 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 361559,931,880 - 60,139,939 (-)NCBINCBI36hg18NCBI36
Build 341559,931,879 - 60,139,939NCBI
Celera1539,034,037 - 39,241,888 (-)NCBI
Cytogenetic Map15q22.2NCBI
HuRef1538,966,908 - 39,175,239 (-)NCBIHuRef
CHM1_11562,264,112 - 62,472,186 (-)NCBICHM1_1
Vps13c
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mRatBN7.2868,478,366 - 68,651,893 (+)NCBI
Rnor_6.0 Ensembl873,682,887 - 73,842,928 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_6.0873,682,814 - 73,843,290 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.0878,012,179 - 78,174,887 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4872,196,264 - 72,365,531 (+)NCBIRGSC3.4rn4RGSC3.4
Celera873,070,323 - 73,229,973 (-)NCBICelera
Cytogenetic Map8q24NCBI
Vps13c
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495545013,016,950 - 13,174,990 (+)EnsemblChiLan1.0
ChiLan1.0NW_00495545013,016,933 - 13,178,797 (+)NCBIChiLan1.0ChiLan1.0
VPS13C
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
PanPan1.11559,116,946 - 59,319,705 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1559,119,001 - 59,319,619 (-)Ensemblpanpan1.1panPan2
Mhudiblu_PPA_v01540,819,512 - 41,020,644 (-)NCBIMhudiblu_PPA_v0panPan3
VPS13C
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.13026,600,181 - 26,776,347 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl3026,601,513 - 26,776,763 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha3026,516,146 - 26,692,465 (-)NCBI
ROS_Cfam_1.03026,777,160 - 26,946,615 (-)NCBI
UMICH_Zoey_3.13026,714,979 - 26,884,285 (-)NCBI
UNSW_CanFamBas_1.03026,773,728 - 26,944,232 (-)NCBI
UU_Cfam_GSD_1.03027,018,883 - 27,188,026 (-)NCBI
Vps13c
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024408640104,813,396 - 104,994,087 (-)NCBI
SpeTri2.0NW_00493647122,661,899 - 22,842,144 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
VPS13C
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1109,931,264 - 110,104,241 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11109,931,269 - 110,105,519 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21121,361,178 - 121,530,405 (+)NCBISscrofa10.2Sscrofa10.2susScr3
VPS13C
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.12621,463,393 - 21,647,944 (+)NCBI
ChlSab1.1 Ensembl2621,463,657 - 21,648,603 (+)Ensembl
Vero_WHO_p1.0NW_023666048119,739,546 - 119,924,207 (-)NCBI
Vps13c
(Heterocephalus glaber - naked mole-rat)
Naked Mole-rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_00462478110,259,971 - 10,414,421 (+)NCBI

Position Markers
D9Dcr7  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38967,993,744 - 67,993,852UniSTSGRCm38
MGSCv37967,841,551 - 67,841,659UniSTSGRCm37
Celera965,223,006 - 65,223,108UniSTS
Cytogenetic Map9CUniSTS
cM Map9 UniSTS
AI552542  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38967,995,447 - 67,995,538UniSTSGRCm38
MGSCv37967,843,254 - 67,843,345UniSTSGRCm37
Celera965,224,703 - 65,224,794UniSTS
Cytogenetic Map9CUniSTS
Whitehead/MRC_RH9651.29UniSTS


QTLs in Region (GRCm38)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
13208563Bmiq8_mbody mass index QTL 8 (mouse)92500000069000000Mouse
1558872Ibdq1_minflammatory bowel disease QTL 1 (mouse)Not determined93406754473531973Mouse
1301252Etohc3_methanol consumption 3 (mouse)Not determined93512317869123299Mouse
1301972Cocrb8_mcocaine related behavior 8 (mouse)Not determined93512317869123299Mouse
1558968Tbdr1_mbody temperature response to dietary restriction, QTL 1 (mouse)Not determined93512317869123299Mouse
4142042Alpq3_malcohol preference QTL 3 (mouse)Not determined93739490198819654Mouse
10043971Obq32_mobesity QTL 32 (mouse)Not determined93791224471912244Mouse
12791002Arlsq2_maortic root lesion size QTL 2 (mouse)93819229172192291Mouse
12790986Pcho9_mplasma cholesterol 9 (mouse)93819229172192291Mouse
12790992Arlsq1_maortic root lesion size QTL 1 (mouse)93819229172192291Mouse
12738449Spcq2_msperm count QTL 2 (mouse)93949260173492601Mouse
4141071Ath29_matherosclerosis 29 (mouse)Not determined94050829874700643Mouse
1301702Brm1_mbrachyury modifier 1 (mouse)Not determined94089776474897921Mouse
1301558Stheal8_msoft tissue heal 8 (mouse)Not determined94357343177573577Mouse
10045639Heal28_mwound healing/regeneration 28 (mouse)Not determined94357343177573577Mouse
1301435Trigq1_mtriglyceride QTL 1 (mouse)Not determined94452089278520980Mouse
1300716Cd4ts4_mCD4 T cell subset 4 (mouse)Not determined94892377482923895Mouse
1300563Pgia5_mproteoglycan induced arthritis 5 (mouse)Not determined94892377482923895Mouse
4141224Dxmod_mdoxorubicin nephropathy modifier (mouse)Not determined49541121101528921Mouse
14746993Manh66_mmandible shape 66 (mouse)94990676683906766Mouse
1301184Bdln4_mbody length 4 (mouse)Not determined95024403884244166Mouse
1301241Renf1_mrenal failure 1 (mouse)Not determined95212317899910428Mouse
13525008Hrtiq1_mheart rate time index, QTL 1 (mouse)95251479868648726Mouse
12790990Tgl7_mtriglyceride 7 (mouse)95465267888652678Mouse
10043877Adip21_madiposity 21 (mouse)Not determined95653182690531973Mouse
1301549Bbaa9_mB.burgdorferi-associated arthritis 9 (mouse)Not determined95789776471574472Mouse
4141676Neogq1_mneonatal growth QTL 1 (mouse)Not determined95789776486239920Mouse
13525007Lfhrvq1_mlow frequency time index heart rate varaiblity, QTL 1 (mouse)95887703568648726Mouse
1301172Fembrs6_mfemur breaking strength 6 (mouse)Not determined95911710593117252Mouse
1301803Stheal9_msoft tissue heal 9 (mouse)Not determined95911710593117252Mouse
5491195Mobq8_mmultigenic obesity QTL 8 (mouse)Not determined95946266493462846Mouse
1300848Skull13_mskull morphology 13 (mouse)Not determined95946266493462846Mouse
1301456Adip5_madiposity 5 (mouse)Not determined95946266493462846Mouse
13207569Tcq13_mtotal cholesterol QTL 13 (mouse)959990000109260000Mouse
1301611Lrnx3_mlearning contextual 3 (mouse)Not determined96224248596242599Mouse
4141833W10q13_mweight 10 weeks QTL 13 (mouse)Not determined63332429120362868Mouse
4141545Tailaq2_mtail length adjusted QTL 2 (mouse)Not determined63332429120362868Mouse
1357635Splq4_mspleen weight QTL 4 (mouse)Not determined963332429120362868Mouse
11081165Psl6_mpromotion susceptibility QTL 6 (mouse)96513390995640755Mouse
1301290Smgd1_msubmucosal gland distribution 1 (mouse)Not determined96592377486695914Mouse
1301636Lith5_mlithogenic gene 5 (mouse)Not determined966207024100207122Mouse
10045638Heal29_mwound healing/regeneration 29 (mouse)Not determined967124167101124167Mouse

miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:74
Count of miRNA genes:73
Interacting mature miRNAs:74
Transcripts:ENSMUST00000077879
Prediction methods:Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts NM_177184 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006511224 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006511225 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006511226 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006511228 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_001778932 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_379424 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AB281675 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AB281676 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AB281677 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AB281678 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AB281679 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AB281680 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AB281681 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AB281682 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AB281683 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AB281684 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AB281685 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AB281686 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AB281687 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AB281688 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AC156799 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK030931 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK033530 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK045749 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK048766 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK049557 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK083667 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK129486 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK158842 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: ENSMUST00000077879   ⟹   ENSMUSP00000077040
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl967,840,396 - 67,995,638 (+)Ensembl
RefSeq Acc Id: ENSMUST00000213168   ⟹   ENSMUSP00000149778
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl967,953,788 - 67,987,018 (+)Ensembl
RefSeq Acc Id: ENSMUST00000215524   ⟹   ENSMUSP00000149945
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl967,975,816 - 67,995,634 (+)Ensembl
RefSeq Acc Id: ENSMUST00000216856
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl967,971,954 - 67,974,533 (+)Ensembl
RefSeq Acc Id: ENSMUST00000217386   ⟹   ENSMUSP00000150974
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl967,840,412 - 67,905,810 (+)Ensembl
RefSeq Acc Id: NM_177184   ⟹   NP_796158
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39967,747,633 - 67,905,026 (+)NCBI
GRCm38967,840,351 - 67,997,744 (+)NCBI
MGSCv37967,688,203 - 67,843,441 (+)RGD
Celera965,070,042 - 65,224,890 (+)RGD
cM Map9 ENTREZGENE
Sequence:
RefSeq Acc Id: XM_006511224   ⟹   XP_006511287
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39967,747,594 - 67,905,024 (+)NCBI
GRCm38967,840,323 - 67,997,742 (+)NCBI
Sequence:
RefSeq Acc Id: XM_006511225   ⟹   XP_006511288
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39967,747,594 - 67,905,024 (+)NCBI
GRCm38967,840,316 - 67,997,742 (+)NCBI
Sequence:
RefSeq Acc Id: XM_006511226   ⟹   XP_006511289
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39967,747,594 - 67,894,300 (+)NCBI
GRCm38967,840,323 - 67,987,018 (+)NCBI
Sequence:
RefSeq Acc Id: XM_006511228   ⟹   XP_006511291
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39967,821,843 - 67,905,024 (+)NCBI
GRCm38967,914,559 - 67,997,742 (+)NCBI
Sequence:
RefSeq Acc Id: XR_001778932
RefSeq Status:
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39967,747,594 - 67,862,347 (+)NCBI
GRCm38967,840,323 - 67,955,065 (+)NCBI
Sequence:
RefSeq Acc Id: XR_379424
RefSeq Status:
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39967,747,594 - 67,905,024 (+)NCBI
GRCm38967,840,323 - 67,997,742 (+)NCBI
Sequence:
Reference Sequences
RefSeq Acc Id: NP_796158   ⟸   NM_177184
- UniProtKB: Q8BX70 (UniProtKB/Swiss-Prot),   A1ILG8 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006511289   ⟸   XM_006511226
- Peptide Label: isoform X3
- UniProtKB: Q8BX70 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: XP_006511287   ⟸   XM_006511224
- Peptide Label: isoform X1
- Sequence:
RefSeq Acc Id: XP_006511288   ⟸   XM_006511225
- Peptide Label: isoform X2
- Sequence:
RefSeq Acc Id: XP_006511291   ⟸   XM_006511228
- Peptide Label: isoform X4
- Sequence:
RefSeq Acc Id: ENSMUSP00000150974   ⟸   ENSMUST00000217386
RefSeq Acc Id: ENSMUSP00000149778   ⟸   ENSMUST00000213168
RefSeq Acc Id: ENSMUSP00000149945   ⟸   ENSMUST00000215524
RefSeq Acc Id: ENSMUSP00000077040   ⟸   ENSMUST00000077879
Protein Domains
ATG_C   Chorein_N   SHR-BD   VPS13   VPS13_C   VPS13_mid_rpt

Promoters
RGD ID:6845327
Promoter ID:MM_KWN:57927
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:3T3L1_Day0,   3T3L1_Day1,   BoneMarrow_0Hour,   BoneMarrow_2Hour,   BoneMarrow_4Hour,   Brain,   Kidney,   Liver,   Lung,   MEF_B4,   MEF_B6
Transcripts:ENSMUST00000056871,   ENSMUST00000057972,   ENSMUST00000098601,   ENSMUST00000113629,   ENSMUST00000113630,   NM_177184,   UC009QMR.1
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv36967,687,944 - 67,688,444 (+)MPROMDB
RGD ID:6845326
Promoter ID:MM_KWN:57930
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:BoneMarrow_0Hour
Transcripts:UC009QMV.1
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv36967,822,971 - 67,823,471 (+)MPROMDB
RGD ID:8670060
Promoter ID:EPDNEW_M13061
Type:initiation region
Name:Vps13c_1
Description:Mus musculus vacuolar protein sorting 13C , mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38967,840,401 - 67,840,461EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:2444207 AgrOrtholog
Ensembl Genes ENSMUSG00000035284 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Ensembl Protein ENSMUSP00000077040 ENTREZGENE, UniProtKB/Swiss-Prot
  ENSMUSP00000149778 UniProtKB/TrEMBL
  ENSMUSP00000149945 UniProtKB/TrEMBL
  ENSMUSP00000150974 UniProtKB/TrEMBL
Ensembl Transcript ENSMUST00000077879 ENTREZGENE, UniProtKB/Swiss-Prot
  ENSMUST00000213168 UniProtKB/TrEMBL
  ENSMUST00000215524 UniProtKB/TrEMBL
  ENSMUST00000217386 UniProtKB/TrEMBL
InterPro Autophagy-rel_C UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  SHR-BD UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  VPS13 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  VPS13_C UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  VPS13_mid_rpt UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  VPS13_N UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  VPS13_N2 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report mmu:320528 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
MGD MGI:2444207 ENTREZGENE
NCBI Gene 320528 ENTREZGENE
PANTHER PTHR16166 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam ATG_C UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Chorein_N UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  SHR-BD UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  VPS13 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  VPS13_C UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  VPS13_mid_rpt UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen Vps13c PhenoGen
UniProt A0A1L1SS63_MOUSE UniProtKB/TrEMBL
  A0A1L1SSJ3_MOUSE UniProtKB/TrEMBL
  A0A1L1SUY8_MOUSE UniProtKB/TrEMBL
  A1ILG8 ENTREZGENE, UniProtKB/TrEMBL
  A1ILG9_MOUSE UniProtKB/TrEMBL
  A1ILH0_MOUSE UniProtKB/TrEMBL
  A1ILH1_MOUSE UniProtKB/TrEMBL
  A1ILH2_MOUSE UniProtKB/TrEMBL
  A1ILH3_MOUSE UniProtKB/TrEMBL
  A1ILH4_MOUSE UniProtKB/TrEMBL
  Q8BX70 ENTREZGENE, UniProtKB/Swiss-Prot
UniProt Secondary Q3V3W5 UniProtKB/Swiss-Prot
  Q6ZPE1 UniProtKB/Swiss-Prot
  Q8BLB1 UniProtKB/Swiss-Prot
  Q8BQI7 UniProtKB/Swiss-Prot


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2016-03-21 Vps13c  vacuolar protein sorting 13C    vacuolar protein sorting 13C (yeast)  Symbol and/or name change 5135510 APPROVED