Golga4 (golgi autoantigen, golgin subfamily a, 4) - Rat Genome Database
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Gene: Golga4 (golgi autoantigen, golgin subfamily a, 4) Mus musculus
Analyze
Symbol: Golga4
Name: golgi autoantigen, golgin subfamily a, 4
RGD ID: 1557150
MGI Page MGI
Description: Is expressed in several structures, including alimentary system; genitourinary system; nervous system; respiratory system; and sensory organ. Orthologous to human GOLGA4 (golgin A4); INTERACTS WITH 1,2-dimethylhydrazine; 17alpha-ethynylestradiol; 2,3,7,8-tetrachlorodibenzodioxine.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: AI225887; AU019508; golgin; Golgin subfamily A member 4; golgin-245; Ol; Olp-1; tGolgin-1
RGD Orthologs
Human
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: GRCm38 - Mouse Genome Assembly GRCm38
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm399118,335,280 - 118,411,587 (+)NCBIGRCm39mm39
GRCm39 Ensembl9118,335,335 - 118,411,587 (+)Ensembl
GRCm389118,506,196 - 118,582,519 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl9118,506,267 - 118,582,519 (+)EnsemblGRCm38mm10GRCm38
MGSCv379118,415,436 - 118,491,637 (+)NCBIGRCm37mm9NCBIm37
MGSCv369118,355,016 - 118,431,217 (+)NCBImm8
Celera9118,976,652 - 119,052,515 (+)NCBICelera
Cytogenetic Map9F3NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component
cytoplasm  (ISO)
Golgi apparatus  (IBA,IDA,ISO)
membrane  (IEA)
nucleoplasm  (ISO)

Molecular Function

References

Additional References at PubMed
PMID:9404721   PMID:10349636   PMID:10922068   PMID:11042159   PMID:11076861   PMID:11217851   PMID:12162805   PMID:12466851   PMID:12477932   PMID:12520002   PMID:14610273   PMID:14681479  
PMID:15489334   PMID:15782199   PMID:16141072   PMID:16141073   PMID:17967808   PMID:18308930   PMID:18554416   PMID:18799693   PMID:21565611   PMID:21873635   PMID:28671696   PMID:32325033  


Genomics

Comparative Map Data
Golga4
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm399118,335,280 - 118,411,587 (+)NCBIGRCm39mm39
GRCm39 Ensembl9118,335,335 - 118,411,587 (+)Ensembl
GRCm389118,506,196 - 118,582,519 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl9118,506,267 - 118,582,519 (+)EnsemblGRCm38mm10GRCm38
MGSCv379118,415,436 - 118,491,637 (+)NCBIGRCm37mm9NCBIm37
MGSCv369118,355,016 - 118,431,217 (+)NCBImm8
Celera9118,976,652 - 119,052,515 (+)NCBICelera
Cytogenetic Map9F3NCBI
GOLGA4
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38.p13 Ensembl337,243,177 - 37,366,751 (+)EnsemblGRCh38hg38GRCh38
GRCh38337,243,269 - 37,366,879 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh37337,284,762 - 37,408,370 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 36337,259,742 - 37,383,246 (+)NCBINCBI36hg18NCBI36
Build 34337,259,741 - 37,383,245NCBI
Celera337,218,214 - 37,341,938 (+)NCBI
Cytogenetic Map3p22.2NCBI
HuRef337,225,865 - 37,349,347 (+)NCBIHuRef
CHM1_1337,236,284 - 37,359,981 (+)NCBICHM1_1
Golga4
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mRatBN7.28118,208,200 - 118,285,003 (+)NCBI
Rnor_6.0 Ensembl8127,171,537 - 127,248,538 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_6.08127,171,221 - 127,248,938 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.08126,393,530 - 126,471,244 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.48123,404,540 - 123,504,104 (+)NCBIRGSC3.4rn4RGSC3.4
Celera8117,393,586 - 117,470,254 (+)NCBICelera
Cytogenetic Map8q32NCBI
Golga4
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554214,131,653 - 4,243,651 (+)EnsemblChiLan1.0
ChiLan1.0NW_0049554214,130,040 - 4,251,968 (+)NCBIChiLan1.0ChiLan1.0
GOLGA4
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
PanPan1.1337,437,626 - 37,556,908 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl337,442,669 - 37,545,634 (+)Ensemblpanpan1.1panPan2
Mhudiblu_PPA_v0337,149,793 - 37,269,709 (+)NCBIMhudiblu_PPA_v0panPan3
GOLGA4
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1 Ensembl237,106,342 - 7,232,624 (+)EnsemblCanFam3.1canFam3CanFam3.1
CanFam3.1237,106,051 - 7,232,628 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
Golga4
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
SpeTri2.0NW_00493647326,741,548 - 26,838,342 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
GOLGA4
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1322,125,121 - 22,250,466 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11322,125,131 - 22,250,465 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21324,019,468 - 24,143,177 (+)NCBISscrofa10.2Sscrofa10.2susScr3
GOLGA4
(Chlorocebus sabaeus - African green monkey)
Vervet AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1152,046,436 - 2,162,590 (-)NCBI
ChlSab1.1 Ensembl152,046,156 - 2,162,235 (-)Ensembl
Golga4
(Heterocephalus glaber - naked mole-rat)
Molerat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_004624890931,878 - 938,932 (+)NCBI

Position Markers
RH135993  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm389118,582,196 - 118,582,388UniSTSGRCm38
MGSCv379118,491,314 - 118,491,506UniSTSGRCm37
Celera9119,052,192 - 119,052,384UniSTS
Cytogenetic Map9F3UniSTS
RH136416  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm389118,558,536 - 118,558,726UniSTSGRCm38
MGSCv379118,467,654 - 118,467,844UniSTSGRCm37
Celera9119,028,547 - 119,028,737UniSTS
Cytogenetic Map9F3UniSTS
Golga4  
Mouse AssemblyChrPosition (strand)SourceJBrowse
Cytogenetic Map9F3UniSTS
cM Map9 UniSTS
Golga4  
Mouse AssemblyChrPosition (strand)SourceJBrowse
Cytogenetic Map9F3UniSTS
cM Map9 UniSTS


QTLs in Region (GRCm38)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
4141833W10q13_mweight 10 weeks QTL 13 (mouse)Not determined63332429120362868Mouse
4141545Tailaq2_mtail length adjusted QTL 2 (mouse)Not determined63332429120362868Mouse
1357635Splq4_mspleen weight QTL 4 (mouse)Not determined963332429120362868Mouse
1301487Nociq1_mnociceptive sensitivity inflammatory QTL 1 (mouse)Not determined984528818118528921Mouse
1300549Bbaa17_mB. burgdorferi-associated arthritis 17 (mouse)Not determined986230401120230530Mouse
1302103Dob2_mdietary obesity 2 (mouse)Not determined986239845120289624Mouse
11251716Siim2_mstress induced immobility 2 (mouse)986748483120748483Mouse
12880422V25Dq6_mvitamin D inactive form serum level QTL 6 (mouse)987800000121800000Mouse
10412242Alpq8_malcohol preference QTL 8 (mouse)Not determined989284925123284925Mouse
1301649Psl1_mpromotion susceptibility QTL 1 (mouse)Not determined989412277123412396Mouse
18182932Metl3_mmetabolite locus 3, N-acetylglutamate (mouse)989563342123563342Mouse
1357657Pymr_mPlasmodium yoelli malaria resistance (mouse)Not determined989977005118938021Mouse
12910770Splic1_mspleen iron content 1 (mouse)991413879124595110Mouse
12910772Lvic6_mliver iron content 6 (mouse)991413879124595110Mouse
12910773Splic3_mspleen iron content 3 (mouse)991413879124595110Mouse
1558767Skmw11_mskeletal muscle weight 11 (mouse)Not determined991641084124595110Mouse
13463474Hbbcq5_mhemoglobin concentration QTL 5 (mouse)991641084124595110Mouse
13463475Hctq7_mhematocrit QTL 7 (mouse)991641084124595110Mouse
13463477Rbc9_mred blood cell count 9 (mouse)991641084124595110Mouse
13463478Mchq18_mmean corpuscular hemoglobin QTL 18 (mouse)991641084124595110Mouse
13463480Mchcq2_mmean corpuscular hemoglobin concentration QTL 2 (mouse)991641084124595110Mouse
12904937Edlmmq9_mextensor digitorum longus muscle mass QTL 9 (mouse)991683173124595110Mouse
12904947Tammq7_mtibialis anterior muscle mass QTL 7 (mouse)991683173124595110Mouse
12904961Gmmq7_mgastrocnemius muscle mass QTL 7 (mouse)991683173124595110Mouse
1302001Bdln5_mbody length 5 (mouse)Not determined993762590124595110Mouse
1301484Bwq6_mbody weight (mouse)Not determined993762590124595110Mouse
14746992Manh67_mmandible shape 67 (mouse)994036768124595110Mouse
11537364Cnes5_mC. neoformans susceptibility locus 5 (mouse)996917590124595110Mouse
1301297Lcho1_mliver cholesterol 1 (mouse)Not determined9101060861124595110Mouse
1357627Tgq2_mtriglyceride QTL 2 (mouse)Not determined9102000187124595110Mouse
1357648Obq18_mobesity QTL 18 (mouse)Not determined9102000187124595110Mouse
1301789Pbwg4_mpostnatal body weight growth 4 (mouse)Not determined9103289445124595110Mouse
10412290Pvacm1l_mplasma vascular cell adhesion molecule 1 levels (mouse)Not determined9103289445124595110Mouse
12879896Berr3_mberghei resistance locus 3 (mouse)9103289445124595110Mouse
13515058Adip20d_madiposity 20d (mouse)9108915010118915010Mouse

miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:230
Count of miRNA genes:180
Interacting mature miRNAs:209
Transcripts:ENSMUST00000084820
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts NM_018748 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006512187 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006512189 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017313473 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017313474 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017313475 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017313476 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017313477 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017313478 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017313479 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017313480 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017313482 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017313483 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036155103 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036155104 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036155105 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036155106 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036155107 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036155108 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036155109 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036155110 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036155111 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036155112 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036155113 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036155114 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036155115 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036155116 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036155117 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_004935483 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_004935484 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_004935485 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_004935486 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_004935487 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_004935488 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_004935489 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AC173340 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AF051357 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK031881 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK134783 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK161568 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK172292 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK178416 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK219816 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC003268 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC007485 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC023102 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC037641 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC053000 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC057561 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC096467 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC134374 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH466587 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CT486004 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: ENSMUST00000084820   ⟹   ENSMUSP00000081880
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl9118,506,267 - 118,582,519 (+)Ensembl
RefSeq Acc Id: ENSMUST00000211826
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl9118,576,593 - 118,579,592 (+)Ensembl
RefSeq Acc Id: ENSMUST00000211838
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl9118,572,772 - 118,581,873 (+)Ensembl
RefSeq Acc Id: ENSMUST00000211840   ⟹   ENSMUSP00000148518
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl9118,556,780 - 118,582,519 (+)Ensembl
RefSeq Acc Id: ENSMUST00000211846   ⟹   ENSMUSP00000148276
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl9118,565,632 - 118,582,117 (+)Ensembl
RefSeq Acc Id: ENSMUST00000212097   ⟹   ENSMUSP00000148748
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl9118,506,451 - 118,556,718 (+)Ensembl
RefSeq Acc Id: ENSMUST00000212151
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl9118,565,276 - 118,572,970 (+)Ensembl
RefSeq Acc Id: ENSMUST00000212183   ⟹   ENSMUSP00000148593
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl9118,536,855 - 118,555,886 (+)Ensembl
RefSeq Acc Id: ENSMUST00000212274   ⟹   ENSMUSP00000148370
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl9118,560,361 - 118,573,020 (+)Ensembl
RefSeq Acc Id: ENSMUST00000212461   ⟹   ENSMUSP00000148311
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl9118,514,180 - 118,548,664 (+)Ensembl
RefSeq Acc Id: ENSMUST00000212593
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl9118,506,271 - 118,531,827 (+)Ensembl
RefSeq Acc Id: ENSMUST00000212620
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl9118,545,197 - 118,548,159 (+)Ensembl
RefSeq Acc Id: ENSMUST00000212913
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl9118,548,408 - 118,553,490 (+)Ensembl
RefSeq Acc Id: NM_018748   ⟹   NP_061218
RefSeq Status: PROVISIONAL
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm399118,335,386 - 118,411,587 (+)NCBI
GRCm389118,506,318 - 118,582,519 (+)NCBI
MGSCv379118,415,436 - 118,491,637 (+)RGD
Celera9118,976,652 - 119,052,515 (+)RGD
cM Map9 ENTREZGENE
Sequence:
RefSeq Acc Id: XM_006512187   ⟹   XP_006512250
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm399118,335,326 - 118,411,587 (+)NCBI
GRCm389118,506,196 - 118,582,519 (+)NCBI
Sequence:
RefSeq Acc Id: XM_006512189   ⟹   XP_006512252
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm399118,335,326 - 118,411,587 (+)NCBI
GRCm389118,506,258 - 118,582,519 (+)NCBI
Sequence:
RefSeq Acc Id: XM_017313473   ⟹   XP_017168962
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm399118,335,281 - 118,411,587 (+)NCBI
GRCm389118,506,196 - 118,582,519 (+)NCBI
Sequence:
RefSeq Acc Id: XM_017313474   ⟹   XP_017168963
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm399118,335,281 - 118,411,587 (+)NCBI
GRCm389118,506,272 - 118,582,519 (+)NCBI
Sequence:
RefSeq Acc Id: XM_017313475   ⟹   XP_017168964
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm399118,335,281 - 118,411,587 (+)NCBI
GRCm389118,506,196 - 118,582,519 (+)NCBI
Sequence:
RefSeq Acc Id: XM_017313476   ⟹   XP_017168965
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm399118,335,314 - 118,411,587 (+)NCBI
GRCm389118,506,246 - 118,582,519 (+)NCBI
Sequence:
RefSeq Acc Id: XM_017313477   ⟹   XP_017168966
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm399118,335,281 - 118,411,587 (+)NCBI
GRCm389118,506,197 - 118,582,519 (+)NCBI
Sequence:
RefSeq Acc Id: XM_017313478   ⟹   XP_017168967
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm399118,335,302 - 118,411,587 (+)NCBI
GRCm389118,506,234 - 118,582,519 (+)NCBI
Sequence:
RefSeq Acc Id: XM_017313479   ⟹   XP_017168968
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm399118,335,281 - 118,411,587 (+)NCBI
GRCm389118,506,197 - 118,582,519 (+)NCBI
Sequence:
RefSeq Acc Id: XM_017313480   ⟹   XP_017168969
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm399118,359,676 - 118,411,587 (+)NCBI
GRCm389118,530,464 - 118,582,519 (+)NCBI
Sequence:
RefSeq Acc Id: XM_017313482   ⟹   XP_017168971
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm399118,359,542 - 118,411,587 (+)NCBI
GRCm389118,530,464 - 118,582,519 (+)NCBI
Sequence:
RefSeq Acc Id: XM_017313483   ⟹   XP_017168972
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm399118,360,363 - 118,411,587 (+)NCBI
GRCm389118,531,295 - 118,582,519 (+)NCBI
Sequence:
RefSeq Acc Id: XM_036155103   ⟹   XP_036010996
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm399118,335,281 - 118,411,587 (+)NCBI
RefSeq Acc Id: XM_036155104   ⟹   XP_036010997
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm399118,335,280 - 118,411,587 (+)NCBI
RefSeq Acc Id: XM_036155105   ⟹   XP_036010998
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm399118,335,281 - 118,411,587 (+)NCBI
RefSeq Acc Id: XM_036155106   ⟹   XP_036010999
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm399118,335,281 - 118,411,587 (+)NCBI
RefSeq Acc Id: XM_036155107   ⟹   XP_036011000
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm399118,335,281 - 118,411,587 (+)NCBI
RefSeq Acc Id: XM_036155108   ⟹   XP_036011001
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm399118,335,281 - 118,411,587 (+)NCBI
RefSeq Acc Id: XM_036155109   ⟹   XP_036011002
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm399118,335,281 - 118,411,587 (+)NCBI
RefSeq Acc Id: XM_036155110   ⟹   XP_036011003
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm399118,335,340 - 118,411,587 (+)NCBI
RefSeq Acc Id: XM_036155111   ⟹   XP_036011004
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm399118,335,281 - 118,411,587 (+)NCBI
RefSeq Acc Id: XM_036155112   ⟹   XP_036011005
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm399118,341,965 - 118,411,587 (+)NCBI
RefSeq Acc Id: XM_036155113   ⟹   XP_036011006
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm399118,335,281 - 118,411,587 (+)NCBI
RefSeq Acc Id: XM_036155114   ⟹   XP_036011007
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm399118,341,960 - 118,411,587 (+)NCBI
RefSeq Acc Id: XM_036155115   ⟹   XP_036011008
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm399118,335,282 - 118,411,587 (+)NCBI
RefSeq Acc Id: XM_036155116   ⟹   XP_036011009
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm399118,359,542 - 118,411,587 (+)NCBI
RefSeq Acc Id: XM_036155117   ⟹   XP_036011010
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm399118,335,282 - 118,411,587 (+)NCBI
RefSeq Acc Id: XR_004935483
RefSeq Status:
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm399118,335,280 - 118,411,587 (+)NCBI
RefSeq Acc Id: XR_004935484
RefSeq Status:
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm399118,335,280 - 118,411,587 (+)NCBI
RefSeq Acc Id: XR_004935485
RefSeq Status:
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm399118,335,280 - 118,411,186 (+)NCBI
RefSeq Acc Id: XR_004935486
RefSeq Status:
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm399118,335,280 - 118,411,587 (+)NCBI
RefSeq Acc Id: XR_004935487
RefSeq Status:
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm399118,335,280 - 118,411,587 (+)NCBI
RefSeq Acc Id: XR_004935488
RefSeq Status:
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm399118,335,280 - 118,411,587 (+)NCBI
RefSeq Acc Id: XR_004935489
RefSeq Status:
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm399118,335,280 - 118,411,186 (+)NCBI
Protein Sequences
Protein RefSeqs NP_061218 (Get FASTA)   NCBI Sequence Viewer  
  XP_006512250 (Get FASTA)   NCBI Sequence Viewer  
  XP_006512252 (Get FASTA)   NCBI Sequence Viewer  
  XP_017168962 (Get FASTA)   NCBI Sequence Viewer  
  XP_017168963 (Get FASTA)   NCBI Sequence Viewer  
  XP_017168964 (Get FASTA)   NCBI Sequence Viewer  
  XP_017168965 (Get FASTA)   NCBI Sequence Viewer  
  XP_017168966 (Get FASTA)   NCBI Sequence Viewer  
  XP_017168967 (Get FASTA)   NCBI Sequence Viewer  
  XP_017168968 (Get FASTA)   NCBI Sequence Viewer  
  XP_017168969 (Get FASTA)   NCBI Sequence Viewer  
  XP_017168971 (Get FASTA)   NCBI Sequence Viewer  
  XP_017168972 (Get FASTA)   NCBI Sequence Viewer  
  XP_036010996 (Get FASTA)   NCBI Sequence Viewer  
  XP_036010997 (Get FASTA)   NCBI Sequence Viewer  
  XP_036010998 (Get FASTA)   NCBI Sequence Viewer  
  XP_036010999 (Get FASTA)   NCBI Sequence Viewer  
  XP_036011000 (Get FASTA)   NCBI Sequence Viewer  
  XP_036011001 (Get FASTA)   NCBI Sequence Viewer  
  XP_036011002 (Get FASTA)   NCBI Sequence Viewer  
  XP_036011003 (Get FASTA)   NCBI Sequence Viewer  
  XP_036011004 (Get FASTA)   NCBI Sequence Viewer  
  XP_036011005 (Get FASTA)   NCBI Sequence Viewer  
  XP_036011006 (Get FASTA)   NCBI Sequence Viewer  
  XP_036011007 (Get FASTA)   NCBI Sequence Viewer  
  XP_036011008 (Get FASTA)   NCBI Sequence Viewer  
  XP_036011009 (Get FASTA)   NCBI Sequence Viewer  
  XP_036011010 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein AAC05573 (Get FASTA)   NCBI Sequence Viewer  
  AAH07485 (Get FASTA)   NCBI Sequence Viewer  
  AAH23102 (Get FASTA)   NCBI Sequence Viewer  
  AAH37641 (Get FASTA)   NCBI Sequence Viewer  
  AAH53000 (Get FASTA)   NCBI Sequence Viewer  
  AAH96467 (Get FASTA)   NCBI Sequence Viewer  
  AAI34375 (Get FASTA)   NCBI Sequence Viewer  
  BAC27591 (Get FASTA)   NCBI Sequence Viewer  
  BAE22281 (Get FASTA)   NCBI Sequence Viewer  
  BAE36468 (Get FASTA)   NCBI Sequence Viewer  
  BAE42930 (Get FASTA)   NCBI Sequence Viewer  
  EDL09249 (Get FASTA)   NCBI Sequence Viewer  
  Q91VW5 (Get FASTA)   NCBI Sequence Viewer  
Reference Sequences
RefSeq Acc Id: NP_061218   ⟸   NM_018748
- UniProtKB: Q91VW5 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: XP_006512250   ⟸   XM_006512187
- Peptide Label: isoform X5
- Sequence:
RefSeq Acc Id: XP_006512252   ⟸   XM_006512189
- Peptide Label: isoform X7
- Sequence:
RefSeq Acc Id: XP_017168962   ⟸   XM_017313473
- Peptide Label: isoform X6
- Sequence:
RefSeq Acc Id: XP_017168963   ⟸   XM_017313474
- Peptide Label: isoform X11
- Sequence:
RefSeq Acc Id: XP_017168964   ⟸   XM_017313475
- Peptide Label: isoform X12
- Sequence:
RefSeq Acc Id: XP_017168966   ⟸   XM_017313477
- Peptide Label: isoform X16
- Sequence:
RefSeq Acc Id: XP_017168965   ⟸   XM_017313476
- Peptide Label: isoform X15
- Sequence:
RefSeq Acc Id: XP_017168967   ⟸   XM_017313478
- Peptide Label: isoform X19
- Sequence:
RefSeq Acc Id: XP_017168968   ⟸   XM_017313479
- Peptide Label: isoform X21
- Sequence:
RefSeq Acc Id: XP_017168969   ⟸   XM_017313480
- Peptide Label: isoform X23
- Sequence:
RefSeq Acc Id: XP_017168971   ⟸   XM_017313482
- Peptide Label: isoform X24
- Sequence:
RefSeq Acc Id: XP_017168972   ⟸   XM_017313483
- Peptide Label: isoform X25
- Sequence:
RefSeq Acc Id: ENSMUSP00000081880   ⟸   ENSMUST00000084820
RefSeq Acc Id: ENSMUSP00000148518   ⟸   ENSMUST00000211840
RefSeq Acc Id: ENSMUSP00000148276   ⟸   ENSMUST00000211846
RefSeq Acc Id: ENSMUSP00000148593   ⟸   ENSMUST00000212183
RefSeq Acc Id: ENSMUSP00000148748   ⟸   ENSMUST00000212097
RefSeq Acc Id: ENSMUSP00000148311   ⟸   ENSMUST00000212461
RefSeq Acc Id: ENSMUSP00000148370   ⟸   ENSMUST00000212274
RefSeq Acc Id: XP_036010997   ⟸   XM_036155104
- Peptide Label: isoform X2
RefSeq Acc Id: XP_036010996   ⟸   XM_036155103
- Peptide Label: isoform X1
RefSeq Acc Id: XP_036010998   ⟸   XM_036155105
- Peptide Label: isoform X3
RefSeq Acc Id: XP_036010999   ⟸   XM_036155106
- Peptide Label: isoform X4
RefSeq Acc Id: XP_036011000   ⟸   XM_036155107
- Peptide Label: isoform X8
RefSeq Acc Id: XP_036011001   ⟸   XM_036155108
- Peptide Label: isoform X9
RefSeq Acc Id: XP_036011004   ⟸   XM_036155111
- Peptide Label: isoform X14
RefSeq Acc Id: XP_036011002   ⟸   XM_036155109
- Peptide Label: isoform X10
RefSeq Acc Id: XP_036011006   ⟸   XM_036155113
- Peptide Label: isoform X18
RefSeq Acc Id: XP_036011008   ⟸   XM_036155115
- Peptide Label: isoform X22
RefSeq Acc Id: XP_036011010   ⟸   XM_036155117
- Peptide Label: isoform X26
RefSeq Acc Id: XP_036011003   ⟸   XM_036155110
- Peptide Label: isoform X13
RefSeq Acc Id: XP_036011007   ⟸   XM_036155114
- Peptide Label: isoform X20
RefSeq Acc Id: XP_036011005   ⟸   XM_036155112
- Peptide Label: isoform X17
RefSeq Acc Id: XP_036011009   ⟸   XM_036155116
- Peptide Label: isoform X22
Protein Domains
GRIP

Promoters
RGD ID:6844616
Promoter ID:MM_KWN:59092
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:BoneMarrow_0Hour,   BoneMarrow_2Hour,   BoneMarrow_4Hour,   Brain,   ES_Cell,   Kidney,   Liver,   Lung,   Spleen
Transcripts:ENSMUST00000084820,   ENSMUST00000098315,   UC009RZR.1,   UC009RZS.1,   UC009RZT.1
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv369118,415,084 - 118,415,584 (+)MPROMDB
RGD ID:6844617
Promoter ID:MM_KWN:59093
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:Brain,   Kidney,   Lung
Transcripts:UC009RZV.1
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv369118,463,846 - 118,466,947 (+)MPROMDB
RGD ID:8671164
Promoter ID:EPDNEW_M13613
Type:initiation region
Name:Golga4_1
Description:Mus musculus golgi autoantigen, golgin subfamily a, 4 , mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm389118,506,271 - 118,506,331EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:1859646 AgrOrtholog
Ensembl Genes ENSMUSG00000038708 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Ensembl Protein ENSMUSP00000081880 ENTREZGENE, UniProtKB/Swiss-Prot
  ENSMUSP00000148276 UniProtKB/TrEMBL
  ENSMUSP00000148311 UniProtKB/TrEMBL
  ENSMUSP00000148370 UniProtKB/TrEMBL
  ENSMUSP00000148518 UniProtKB/TrEMBL
  ENSMUSP00000148593 UniProtKB/TrEMBL
  ENSMUSP00000148748 UniProtKB/TrEMBL
Ensembl Transcript ENSMUST00000084820 ENTREZGENE, UniProtKB/Swiss-Prot
  ENSMUST00000211840 UniProtKB/TrEMBL
  ENSMUST00000211846 UniProtKB/TrEMBL
  ENSMUST00000212097 UniProtKB/TrEMBL
  ENSMUST00000212183 UniProtKB/TrEMBL
  ENSMUST00000212274 UniProtKB/TrEMBL
  ENSMUST00000212461 UniProtKB/TrEMBL
InterPro GRIP_dom UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report mmu:54214 UniProtKB/Swiss-Prot
MGD MGI:1859646 ENTREZGENE
NCBI Gene 54214 ENTREZGENE
Pfam GRIP UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen Golga4 PhenoGen
PROSITE GRIP UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
SMART Grip UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt A0A1D5RL95_MOUSE UniProtKB/TrEMBL
  A0A1D5RLC6_MOUSE UniProtKB/TrEMBL
  A0A1D5RLH4_MOUSE UniProtKB/TrEMBL
  A0A1D5RLV4_MOUSE UniProtKB/TrEMBL
  A0A1D5RM19_MOUSE UniProtKB/TrEMBL
  A0A1D5RME8_MOUSE UniProtKB/TrEMBL
  A4IF57_MOUSE UniProtKB/TrEMBL
  GOGA4_MOUSE UniProtKB/Swiss-Prot
  Q05CM2_MOUSE UniProtKB/TrEMBL
  Q3T9U0_MOUSE UniProtKB/TrEMBL
  Q3TT57_MOUSE UniProtKB/TrEMBL
  Q3UYD1_MOUSE UniProtKB/TrEMBL
  Q4VAB1_MOUSE UniProtKB/TrEMBL
  Q8C0A4_MOUSE UniProtKB/TrEMBL
  Q91VW5 ENTREZGENE
UniProt Secondary O70365 UniProtKB/Swiss-Prot
  Q8CGH6 UniProtKB/Swiss-Prot