Il36g (interleukin 36G) - Rat Genome Database

Name: Il36g
Creator: Rat Genome Database
License: Creative Commons CC BY 4.0
Keywords: Rat Gene RGD Genome

Gene: Il36g (interleukin 36G) Mus musculus

Analyze

Symbol:

Il36g

Name:

interleukin 36G

RGD ID:

1557109

MGI Page

MGI

Description:

Enables cytokine activity. Acts upstream of or within negative regulation of myoblast differentiation; negative regulation of myoblast fusion; and positive regulation of interleukin-6 production. Located in extracellular space. Orthologous to human IL36G (interleukin 36 gamma).

Type:

protein-coding

RefSeq Status:

VALIDATED

Previously known as:

If36g; IL-1F9; IL-36gamma; Il1f9; interleukin 1 family, member 9; interleukin-1 family member 9; interleukin-36 gamma

RGD Orthologs

Alliance Genes

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	IL36G (interleukin 36 gamma)	HGNC	EggNOG, Ensembl, HGNC, HomoloGene, OMA, OrthoMCL, Panther, PhylomeDB, Treefam
Rattus norvegicus (Norway rat):	Il36g (interleukin 36, gamma)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):	IL36G (interleukin 36 gamma)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Canis lupus familiaris (dog):	IL36G (interleukin 36 gamma)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):	Il36g (interleukin 36 gamma)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):	IL36G (interleukin 36 gamma)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):	Il36g (interleukin 36 gamma)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Other homologs ²
Homo sapiens (human):	IL36A (interleukin 36 alpha)	HGNC	OrthoDB
Alliance orthologs ³
Homo sapiens (human):	IL36G (interleukin 36 gamma)	Alliance	DIOPT (HGNC\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Rattus norvegicus (Norway rat):	Il36g (interleukin 36, gamma)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)

Latest Assembly:

GRCm39 - Mouse Genome Assembly GRCm39

Position:

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	2	24,076,488 - 24,083,579 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	2	24,076,488 - 24,083,580 (+)	Ensembl		GRCm39 Ensembl
GRCm38	2	24,186,476 - 24,193,567 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	2	24,186,476 - 24,193,568 (+)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	2	24,041,996 - 24,049,087 (+)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	2	24,009,168 - 24,014,841 (+)	NCBI		MGSCv36	mm8
Celera	2	23,911,774 - 23,936,073 (+)	NCBI		Celera
Cytogenetic Map	2	A3	NCBI
cM Map	2	16.24	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

endometriosis (ISO)

genetic disease (ISO)

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

(-)-alpha-phellandrene (ISO)

(-)-demecolcine (ISO)

2-hydroxypropanoic acid (ISO)

alpha-phellandrene (ISO)

arsane (EXP,ISO)

arsenic atom (EXP,ISO)

benzalkonium chloride (EXP)

benzo[a]pyrene (ISO)

beta-naphthoflavone (ISO)

bis(2-chloroethyl) sulfide (ISO)

bisphenol A (EXP,ISO)

Brevetoxin B (ISO)

buta-1,3-diene (EXP)

carbon nanotube (EXP)

CGP 52608 (ISO)

chloroprene (EXP)

chlorpyrifos (EXP)

crocidolite asbestos (ISO)

deoxynivalenol (ISO)

ethyl methanesulfonate (ISO)

ferulic acid (EXP)

formaldehyde (ISO)

genistein (EXP)

hydroquinone (ISO)

imiquimod (EXP)

lipopolysaccharide (ISO)

malathion (ISO)

nickel atom (ISO)

paracetamol (ISO)

paraquat (EXP)

pentanal (ISO)

rac-lactic acid (ISO)

resveratrol (ISO)

S-(1,2-dichlorovinyl)-L-cysteine (ISO)

S-adenosyl-L-methioninate (EXP)

S-adenosyl-L-methionine (EXP)

silicon dioxide (EXP,ISO)

sodium arsenate (ISO)

sodium arsenite (ISO)

sodium dodecyl sulfate (ISO)

sodium fluoride (ISO)

trichloroethene (ISO)

triclosan (ISO)

vanadyl sulfate (ISO)

vincristine (ISO)

zoledronic acid (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

cellular response to lipopolysaccharide (IBA)

cytokine-mediated signaling pathway (IBA)

immune response (IEA)

immune system process (IEA)

inflammatory response (IEA)

inflammatory response to antigenic stimulus (IBA)

innate immune response (IEA)

negative regulation of myoblast differentiation (IMP)

negative regulation of myoblast fusion (IMP)

positive regulation of cytokine production (IDA)

positive regulation of gene expression (IBA)

positive regulation of interleukin-6 production (IGI)

Cellular Component

cytoplasm (IEA)

cytosol (ISO)

extracellular region (IEA)

extracellular space (IBA,IDA)

nucleoplasm (ISO)

plasma membrane (ISO)

Molecular Function

cytokine activity (IBA,IGI)

Phenotype Annotations Click to see Annotation Detail View

Mammalian Phenotype

abnormal cytokine level (IAGP)

abnormal interleukin level (IAGP)

abnormal macrophage activation involved in immune response (IAGP)

abnormal macrophage morphology (IAGP)

abnormal tumor necrosis factor level (IAGP)

decreased alveolar macrophage number (IAGP)

decreased CD4-positive, alpha-beta T cell number (IAGP)

decreased interleukin-9 secretion (IAGP)

decreased susceptibility to induced colitis (IAGP)

hindlimb paralysis (IAGP)

impaired macrophage phagocytosis (IAGP)

impaired neutrophil recruitment (IAGP)

increased CD11b-high dendritic cell number (IAGP)

increased CD4-positive, alpha-beta T cell number (IAGP)

increased macrophage apoptosis (IAGP)

increased regulatory T cell number (IAGP)

increased susceptibility to bacterial infection (IAGP)

increased susceptibility to bacterial infection induced morbidity/mortality (IAGP)

increased susceptibility to Herpesvirales infection (IAGP)

increased susceptibility to Herpesvirales infection induced morbidity/mortality (IAGP)

increased susceptibility to Orthomyxoviridae infection (IAGP)

increased susceptibility to Orthomyxoviridae infection induced morbidity/mortality (IAGP)

increased susceptibility to weight loss (IAGP)

References

References - curated

#	Reference Title	Reference Citation
1.	Functional annotation of a full-length mouse cDNA collection.	Kawai J, etal., Nature. 2001 Feb 8;409(6821):685-90.
2.	MGDs mouse GO annotations	MGD data from the GO Consortium
3.	ClinVar Automated Import and Annotation Pipeline	RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
4.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions

Additional References at PubMed

PMID:10349636	PMID:11042159	PMID:11076861	PMID:11991723	PMID:12466851	PMID:12477932	PMID:12819125	PMID:12958152	PMID:16141072	PMID:16141073	PMID:16602821	PMID:19571816
PMID:20562862	PMID:21267068	PMID:21677750	PMID:21860022	PMID:21873635	PMID:21965679	PMID:23095752	PMID:23844157	PMID:24829417	PMID:26203636	PMID:26377915	PMID:26438362
PMID:28176791	PMID:28327619	PMID:28724920	PMID:28774595	PMID:29212956	PMID:29760082	PMID:29848754	PMID:30118914	PMID:30224457	PMID:30323031	PMID:31578266	PMID:31805013
PMID:33558616	PMID:33824208	PMID:34246054	PMID:35222417	PMID:35781326	PMID:36059446	PMID:36740182	PMID:37545106	PMID:37720217

Genomics

Comparative Map Data

Il36g
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	2	24,076,488 - 24,083,579 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	2	24,076,488 - 24,083,580 (+)	Ensembl		GRCm39 Ensembl
GRCm38	2	24,186,476 - 24,193,567 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	2	24,186,476 - 24,193,568 (+)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	2	24,041,996 - 24,049,087 (+)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	2	24,009,168 - 24,014,841 (+)	NCBI		MGSCv36	mm8
Celera	2	23,911,774 - 23,936,073 (+)	NCBI		Celera
Cytogenetic Map	2	A3	NCBI
cM Map	2	16.24	NCBI

IL36G
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	2	112,978,006 - 112,985,658 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	2	112,973,203 - 112,985,658 (+)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	2	113,735,583 - 113,743,235 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	2	113,452,077 - 113,459,698 (+)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	2	113,451,836 - 113,459,458	NCBI
Celera	2	107,120,767 - 107,128,388 (+)	NCBI		Celera
Cytogenetic Map	2	q14.1	NCBI
HuRef	2	106,190,145 - 106,197,806 (+)	NCBI		HuRef
CHM1_1	2	113,739,752 - 113,747,405 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	2	113,404,536 - 113,412,188 (+)	NCBI		T2T-CHM13v2.0

Il36g
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	3	27,346,675 - 27,352,839 (+)	NCBI		GRCr8
mRatBN7.2	3	6,948,323 - 6,954,485 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	3	6,948,297 - 6,954,480 (+)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	3	10,042,438 - 10,048,603 (+)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	3	18,628,663 - 18,634,828 (+)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	3	16,818,475 - 16,824,640 (+)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	3	1,285,658 - 1,291,836 (+)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	3	1,285,664 - 1,291,865 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	3	1,278,763 - 1,284,915 (+)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	3	2,432,285 - 2,438,437 (+)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
Celera	3	1,785,790 - 1,791,942 (+)	NCBI		Celera
Cytogenetic Map	3	p13	NCBI

IL36G
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	12	15,168,900 - 15,360,996 (-)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	2A	15,171,664 - 15,362,358 (-)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	2A	89,080,711 - 89,293,626 (-)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	2A	113,781,781 - 113,965,660 (+)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	2A	113,953,169 - 113,965,648 (+)	Ensembl	panpan1.1		panPan2
PanPan1.1 Ensembl	2A	113,985,464 - 113,988,046 (+)	Ensembl	panpan1.1		panPan2

IL36G
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	17	37,100,557 - 37,148,402 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	17	37,144,309 - 37,149,400 (+)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	17	36,913,566 - 36,918,410 (+)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	17	37,920,415 - 37,925,259 (+)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	17	37,752,862 - 37,926,257 (+)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	17	37,055,847 - 37,060,691 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	17	37,112,332 - 37,117,178 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	17	37,326,118 - 37,330,966 (+)	NCBI		UU_Cfam_GSD_1.0

Il36g
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024406292	82,460,389 - 82,466,760 (+)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936783	1,354,955 - 1,360,519 (+)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936783	1,355,562 - 1,359,524 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

IL36G
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	14	15,997,954 - 16,007,394 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	14	16,000,301 - 16,006,810 (+)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666080	3,673,689 - 3,681,391 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Il36g
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624749	13,019,657 - 13,025,590 (+)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624749	13,016,497 - 13,026,271 (+)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Variants

Variants in Il36g
185 total Variants

miRNA Target Status

Predicted Target Of

	Summary Value
Count of predictions:	243
Count of miRNA genes:	204
Interacting mature miRNAs:	225
Transcripts:	ENSMUST00000057567
Prediction methods:	Miranda, Rnahybrid, Targetscan
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

QTLs in Region (GRCm39)

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
4141836	Tgq11_m	triglyceride QTL 11 (mouse)			Not determined			1	25324559	Mouse
4142333	Tgq10_m	triglyceride QTL 10 (mouse)			Not determined			1	25324559	Mouse
1301838	Sluc16_m	susceptibility to lung cancer 16 (mouse)			Not determined		2	1	26529589	Mouse
12904743	Carcdq3_m	cardiac collagen deposition QTL 3 (mouse)					2	3234940	28179150	Mouse
1301769	Orgwq2_m	organ weight QTL 2 (mouse)			Not determined		2	3887126	93421651	Mouse
1301980	Fcsa5_m	femoral cross-sectional area 5 (mouse)			Not determined		2	7679115	41679261	Mouse
1301790	Pcfm1_m	periosteal circumference and femur length 1 (mouse)			Not determined		2	8236296	42236396	Mouse
10043876	Adip22_m	adiposity 22 (mouse)			Not determined		2	8308051	42308240	Mouse
1300624	Insq7_m	insulin QTL 7 (mouse)			Not determined		2	9384446	43384575	Mouse
10755513	Amzn4_m	anatomical modifier of Zfp423 4 (mouse)					2	9384446	43384575	Mouse
12903993	Opfaq1_m	open field activity QTL 1 (mouse)					2	9676691	27022642	Mouse
8552707	Cia23_m	collagen induced arthritis QTL 23 (mouse)			Not determined		2	12129537	66556453	Mouse
1301641	Sbmd2_m	spinal bone mineral density 2 (mouse)			Not determined		2	14214567	48214713	Mouse
1357881	Estoq1_m	embryo survival total QTL 1 (mouse)			Not determined		2	20897778	118894840	Mouse
1357454	Kidq1_m	kidney weight QTL 1 (mouse)			Not determined		2	20897778	118894840	Mouse
1357436	Splq1_m	spleen weight QTL 1 (mouse)			Not determined		2	20897778	118894840	Mouse
39128209	Lwq14_m	liver weight QTL 14 (mouse)					2	20897778	118894840	Mouse
1558899	Egq1_m	early growth QTL 1 (mouse)			Not determined		2	20897778	118894840	Mouse
1558966	W10q9_m	weight 10 weeks QTL 9 (mouse)			Not determined		2	20897778	118894840	Mouse
1558915	W3q1_m	weight 3 weeks QTL 1 (mouse)			Not determined		2	20897778	118894840	Mouse
1558738	W6q1_m	weight 6 weeks QTL 1 (mouse)			Not determined		2	20897778	118894840	Mouse
1357681	Hrtq1_m	heart weight QTL 1 (mouse)			Not determined		2	20897778	118894840	Mouse
1301376	Etohc1_m	ethanol consumption 1 (mouse)			Not determined		2	21129725	55129871	Mouse
4141708	Pbwg1.2_m	postnatal body weight growth 1.2 (mouse)			Not determined			21129725	55129871	Mouse
13463470	Tubisq1_m	tubulointerstitial injury severity, QTL 1 (mouse)					2	23689145	57689269	Mouse

Expression

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_153511	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AK081783	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK156687	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AL732430	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AY071843	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BC116227	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BC116228	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BY778759	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CH466542	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

RefSeq Acc Id:

ENSMUST00000057567 ⟹ ENSMUSP00000053391

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	2	24,076,488 - 24,083,580 (+)	Ensembl
GRCm38.p6 Ensembl	2	24,186,476 - 24,193,568 (+)	Ensembl

RefSeq Acc Id:

NM_153511 ⟹ NP_705731

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39	2	24,076,488 - 24,083,579 (+)	NCBI
GRCm38	2	24,186,476 - 24,193,567 (+)	ENTREZGENE
MGSCv37	2	24,041,996 - 24,049,087 (+)	RGD
Celera	2	23,911,774 - 23,918,575 (+)	ENTREZGENE
cM Map	2		ENTREZGENE

Sequence:

show sequence

ATCATTACACCTGGGAGCTGCCCAAGCTGGGATTTGGTCTTCTAGACTTTCCATAAGGACTCTT
TCTTGCCATGTACCTACAAACCTACAAAACCCTTTGAGTGCGCCTCTGAGTGTGGAGCTTTCTG
CAGTTCAGGGTTCAGTGAATGGACAGATCTGTCTTGCTGTAAGTGATCCTGTGAGCGATCCTGT
GAGCGATCCTGTGAGCGATCCTGTGAGCGATCCTGTGAGCGATCCTGTGAGTGATCCTGTGAGC
AATCCTGTGAGAGCTCTGTGCACCAGAACAAGATCACGATGGAAAACAATGAAAAAAAAAACAT
TGTGTATGGAAGTGATGTTGAGATGGAACACGAGAGAGCTGGGCTATTTGTATCTTCAGCTATG
TTTTCTAAACACCCATTTTCTACACACATCTCAGGAAGAGAAACTCCTGACTTTGGGGAGGTTT
TTGACTTGGACCAGCAGGTGTGGATCTTTCGTAATCAGGCCCTTGTGACAGTTCCACGAAGCCA
CAGAGTAACCCCAGTCAGCGTGACTATCCTCCCATGCAAGTACCCAGAGTCTCTTGAACAGGAC
AAAGGGATTGCCATTTATTTGGGAATTCAGAATCCAGATAAATGCCTGTTTTGTAAGGAAGTTA
ATGGACACCCTACTTTGCTGCTAAAGGAAGAGAAGATTTTGGATTTGTACCACCACCCTGAGCC
AATGAAGCCATTCCTGTTTTACCACACCCGGACAGGTGGAACATCCACCTTTGAATCAGTGGCT
TTCCCTGGCCACTATATTGCCTCCTCCAAGACTGGCAACCCCATCTTCCTCACATCAAAAAAGG
GAGAATATTACAACATTAACTTCAATTTAGATATAAAGTCTTAAACTCAGCATGGAAGTGGAGG
GTTGGTTAGAACTCTTCCTCTTAAAACATCAAACCTCTAATATGTTATCATTTGTTTGATCTAT
GGTATTTTCATACTGAAAGGTAAGCAGGACCAACATTATCTCCTTTCATAGATGAAGAAGCAAC
AAAATAATGCATACTCCAAAGTCGGTGGGATTGGAGTGGTGTAAGGATGTTCTCTAAGACTGAA
GTGGTCCAATCTATAAGACATCATGTCTGAGAAATAGGGTGCTGTGCCACAGTGTATAAAACCT
AGAATGCCCTGTGTGTGAGTGGTGACATCCTCATTTCCAGCCATTGGCCTGATTCATACCATGT
TTTCACACATTTGTAATATCAACTCCTTGCATTTGGATAGCAGAGGCCTCACAATGACATTTGC
CTCAACAGCTAATAGCTTTGATCTTTCAATGCTGTGTAGATCTGAATACACTAGAAAAGGAATT
AGAATCCTGAGTGAATGAACTGTGAGGAGCCGCCCTCACATTTGCCATTATAAGATGGCACTGA
CAGCTGTGTTCTAAGTGGTAAACATAGTCTGCACACATGCAGGGGCAGTTTTCCCACCATGTGT
TCTGCCTTTCCCGTGATGACAACTGGGCCGATGGGCTGCAGCCAATCAGGGAGTAATACGTCCT
AGGTGGAGGATAATTCTCCTTAAAAGGGACGGGGTTCTGGCACTCTCTCCCTTCCTTGCTTGCT
CTCTTGCACTCTGGCTCCTGAAGATGTAAGCAATAAAGCTTTGCCGC

hide sequence

Protein Sequences


Protein RefSeqs	NP_705731	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	AAI16228	(Get FASTA)	NCBI Sequence Viewer
	AAI16229	(Get FASTA)	NCBI Sequence Viewer
	AAL67153	(Get FASTA)	NCBI Sequence Viewer
	BAE33808	(Get FASTA)	NCBI Sequence Viewer
	BAE43375	(Get FASTA)	NCBI Sequence Viewer
	EDL08162	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSMUSP00000053391
	ENSMUSP00000053391.3
GenBank Protein	Q8R460	(Get FASTA)	NCBI Sequence Viewer

RefSeq Acc Id:	NP_705731 ⟸ NM_153511
- UniProtKB:	Q8R460 (UniProtKB/Swiss-Prot), Q14BB6 (UniProtKB/Swiss-Prot), Q3U0P4 (UniProtKB/TrEMBL)
- Sequence:	show sequence MENNEKKNIVYGSDVEMEHERAGLFVSSAMFSKHPFSTHISGRETPDFGEVFDLDQQVWIFRNQ ALVTVPRSHRVTPVSVTILPCKYPESLEQDKGIAIYLGIQNPDKCLFCKEVNGHPTLLLKEEKI LDLYHHPEPMKPFLFYHTRTGGTSTFESVAFPGHYIASSKTGNPIFLTSKKGEYYNINFNLDIK S hide sequence

RefSeq Acc Id:

ENSMUSP00000053391 ⟸ ENSMUST00000057567

Protein Structures

Name	Modeler	Protein Id	AA Range	Protein Structure
AF-Q8R460-F1-model_v2	AlphaFold	Q8R460	1-164	view protein structure

Promoters

RGD ID:

6831615

Promoter ID:

MM_KWN:28031

Type:

Non-CpG

SO ACC ID:

SO:0000170

Source:

MPROMDB

Tissues & Cell Lines:

BoneMarrow_2Hour, BoneMarrow_4Hour

Transcripts:

OTTMUST00000028257, UC008IOP.1

Position:

Mouse Assembly	Chr	Position (strand)	Source
MGSCv36	2	24,041,916 - 24,042,416 (+)	MPROMDB

RGD ID:

6876508

Promoter ID:

EPDNEW_M1704

Type:

initiation region

Name:

Il1f9_1

Description:

Mus musculus interleukin 1 family, member 9 , mRNA.

SO ACC ID:

SO:0000170

Source:

EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)

Experiment Methods:

Single-end sequencing.

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm38	2	24,186,442 - 24,186,502	EPDNEW

Additional Information

External Database Links

Database	Acc Id	Source(s)
AGR Gene	MGI:2449929	AgrOrtholog
Ensembl Genes	ENSMUSG00000044103	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSMUST00000057567	ENTREZGENE
	ENSMUST00000057567.3	UniProtKB/TrEMBL
Gene3D-CATH	2.80.10.50	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
InterPro	IL-1_fam	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	IL1/FGF	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report	mmu:215257	UniProtKB/TrEMBL
MGD	MGI:2449929	ENTREZGENE
NCBI Gene	215257	ENTREZGENE
PANTHER	INTERLEUKIN-36 GAMMA	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	PTHR10078	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam	IL1	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen	Il36g	PhenoGen
SMART	IL1	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Superfamily-SCOP	SSF50353	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt	IL36G_MOUSE	UniProtKB/Swiss-Prot
	Q14BB6	ENTREZGENE
	Q3U0P4	ENTREZGENE, UniProtKB/TrEMBL
	Q8R460	ENTREZGENE
UniProt Secondary	Q14BB6	UniProtKB/Swiss-Prot

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2020-12-28	Il36g	interleukin 36G	Il1f9	interleukin 1 family, member 9	Symbol and/or name updated	27372883	PROVISIONAL

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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