Rangrf (RAN guanine nucleotide release factor)

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Gene: Rangrf (RAN guanine nucleotide release factor) Mus musculus

Analyze

Symbol:

Rangrf

Name:

RAN guanine nucleotide release factor

RGD ID:

1557008

MGI Page

MGI

Description:

Is expressed in central nervous system; retina; retina ganglion cell layer; retina inner nuclear layer; and retina outer nuclear layer. Orthologous to human RANGRF (RAN guanine nucleotide release factor); INTERACTS WITH 1,2-dimethylhydrazine; 17alpha-ethynylestradiol; 2,3,7,8-tetrachlorodibenzodioxine.

Type:

protein-coding

RefSeq Status:

VALIDATED

Also known as:

2400006H24Rik; MGC107268; Mog; Mog1; Ra; ran-binding protein MOG1; Rangnrf; RP23-396M19.8

RGD Orthologs

Human

Rat

Chinchilla

Bonobo

Dog

Squirrel

Pig

Green Monkey

Naked Mole-Rat

Alliance Genes

More Info

more info ...

Related Pseudogenes:

Gm10355 Gm15711 Gm18753 Gm4535 Gm7791 Gm8572

Latest Assembly:

GRCm38 - Mouse Genome Assembly GRCm38

Position:

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	11	68,863,310 - 68,866,011 (-)	NCBI	GRCm39		mm39
GRCm39 Ensembl	11	68,863,310 - 68,866,011 (-)	Ensembl
GRCm38	11	68,972,484 - 68,975,185 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	11	68,972,484 - 68,975,185 (-)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	11	68,785,989 - 68,787,322 (-)	NCBI	GRCm37		mm9	NCBIm37
MGSCv36	11	68,788,682 - 68,790,015 (-)	NCBI			mm8
Celera	11	75,915,300 - 75,916,633 (-)	NCBI		Celera
Cytogenetic Map	11	B3	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

Animal Disease Models (ISO)

Cardiac Arrhythmias (ISO)

Diamond-Blackfan anemia (ISO)

dyskeratosis congenita (ISO)

Experimental Autoimmune Encephalomyelitis (ISO)

Li-Fraumeni syndrome (ISO)

lung adenocarcinoma (ISO)

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

1,2-dimethylhydrazine (EXP)

17alpha-ethynylestradiol (EXP)

2,3,7,8-tetrachlorodibenzodioxine (EXP,ISO)

2-hydroxypropanoic acid (ISO)

4,4'-diaminodiphenylmethane (EXP)

acrylamide (ISO)

benzo[a]pyrene (ISO)

bisphenol A (ISO)

carbon nanotube (EXP)

chromium(6+) (EXP)

clofibrate (EXP)

cobalt dichloride (ISO)

copper(II) sulfate (ISO)

cyclosporin A (EXP,ISO)

dibutyl phthalate (EXP)

dioxygen (EXP)

finasteride (ISO)

flutamide (ISO)

folic acid (EXP)

furan (ISO)

glafenine (ISO)

methyl methanesulfonate (ISO)

N-methyl-4-phenylpyridinium (ISO)

nimesulide (ISO)

paracetamol (EXP)

phenobarbital (EXP)

pirinixic acid (EXP)

rac-lactic acid (ISO)

sulforaphane (EXP)

tamoxifen (EXP)

theophylline (ISO)

triazines (EXP)

trimellitic anhydride (EXP)

valdecoxib (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

endoplasmic reticulum to Golgi vesicle-mediated transport (ISO)

nucleocytoplasmic transport (TAS)

positive regulation of protein localization to cell surface (ISO)

positive regulation of protein localization to plasma membrane (ISO)

protein exit from endoplasmic reticulum (ISO)

protein transport (IEA)

regulation of bundle of His cell action potential (ISO)

regulation of cardiac muscle cell action potential involved in regulation of contraction (ISO)

regulation of membrane depolarization (IMP,ISO)

regulation of membrane depolarization during cardiac muscle cell action potential (ISO)

regulation of membrane potential (ISO)

regulation of microtubule nucleation by Ran protein signal transduction (ISO)

regulation of sodium ion transmembrane transport (IMP,ISO)

regulation of sodium ion transmembrane transporter activity (IMP,ISO)

Cellular Component

caveola (ISO)

cytoplasm (ISO)

cytosol (ISO)

intercalated disc (IDA)

membrane (IEA)

nucleoplasm (IDA,ISO)

nucleus (ISO)

plasma membrane (IEA)

rough endoplasmic reticulum (ISO)

Molecular Function

guanyl-nucleotide exchange factor activity (IDA)

ion channel binding (IPI,ISO)

protein binding (ISO)

small GTPase binding (IDA,ISO)

sodium channel regulator activity (IMP,ISO)

References

References - curated


1.	Adelmann M, etal., J Neuroimmunol. 1995 Dec;63(1):17-27.
2.	Kawai J, etal., Nature. 2001 Feb 8;409(6821):685-90.
3.	MGD data from the GO Consortium
4.	Okazaki Y, etal., Nature. 2002 Dec 5;420(6915):563-73.
5.	RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
6.	RGD automated import pipeline for gene-chemical interactions

Additional References at PubMed

PMID:10349636	PMID:10811801	PMID:10922068	PMID:11042159	PMID:11076861	PMID:12477932	PMID:12819125	PMID:15226823	PMID:15716349	PMID:16141072	PMID:16141073	PMID:16778019
PMID:18184654	PMID:18799693	PMID:23420830	PMID:32325033

Genomics

Comparative Map Data

Rangrf
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	11	68,863,310 - 68,866,011 (-)	NCBI	GRCm39		mm39
GRCm39 Ensembl	11	68,863,310 - 68,866,011 (-)	Ensembl
GRCm38	11	68,972,484 - 68,975,185 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	11	68,972,484 - 68,975,185 (-)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	11	68,785,989 - 68,787,322 (-)	NCBI	GRCm37		mm9	NCBIm37
MGSCv36	11	68,788,682 - 68,790,015 (-)	NCBI			mm8
Celera	11	75,915,300 - 75,916,633 (-)	NCBI		Celera
Cytogenetic Map	11	B3	NCBI

RANGRF
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38.p13 Ensembl	17	8,288,654 - 8,290,092 (+)	Ensembl	GRCh38		hg38	GRCh38
GRCh38	17	8,288,670 - 8,290,087 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh37	17	8,191,988 - 8,193,405 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	17	8,132,714 - 8,134,130 (+)	NCBI	NCBI36		hg18	NCBI36
Celera	17	8,220,823 - 8,222,263 (+)	NCBI
Cytogenetic Map	17	p13.1	NCBI
HuRef	17	8,087,401 - 8,088,841 (+)	NCBI		HuRef
CHM1_1	17	8,200,890 - 8,202,330 (+)	NCBI		CHM1_1

Rangrf
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
mRatBN7.2	10	53,677,467 - 53,678,880 (-)	NCBI
Rnor_6.0 Ensembl	10	55,559,041 - 55,560,422 (-)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_6.0	10	55,559,049 - 55,560,420 (-)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_5.0	10	55,301,089 - 55,302,460 (-)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	10	55,731,343 - 55,732,714 (-)	NCBI	RGSC3.4		rn4	RGSC3.4
Celera	10	52,843,782 - 52,845,153 (-)	NCBI		Celera
Cytogenetic Map	10	q24	NCBI

Rangrf
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955467	8,622,843 - 8,624,401 (-)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955467	8,622,843 - 8,624,401 (-)	NCBI	ChiLan1.0	ChiLan1.0

RANGRF
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
PanPan1.1	17	48,101,744 - 48,103,394 (-)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	17	48,101,744 - 48,103,394 (-)	Ensembl	panpan1.1		panPan2
Mhudiblu_PPA_v0	17	43,369,556 - 43,371,025 (-)	NCBI	Mhudiblu_PPA_v0		panPan3

RANGRF
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1 Ensembl	5	33,084,397 - 33,085,812 (+)	Ensembl	CanFam3.1		canFam3	CanFam3.1
CanFam3.1	5	33,084,355 - 33,085,810 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1

Rangrf
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
SpeTri2.0	NW_004936595	1,513,855 - 1,515,300 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

RANGRF
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	12	53,485,280 - 53,525,756 (+)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	12	53,484,584 - 53,486,716 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	12	55,960,779 - 55,962,215 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

RANGRF
(Chlorocebus sabaeus - African green monkey)

Vervet Assembly	Chr	Position (strand)	Source	Genome Browsers
Vervet Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	16	7,654,235 - 7,655,851 (+)	NCBI
ChlSab1.1 Ensembl	16	7,654,439 - 7,655,703 (+)	Ensembl

Rangrf
(Heterocephalus glaber - naked mole-rat)

Molerat Assembly	Chr	Position (strand)	Source	Genome Browsers
Molerat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla 1.0	NW_004624786	10,866,724 - 10,868,136 (+)	NCBI

QTLs in Region (GRCm38)

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
26884453	Sklq16_m	skull length QTL 16, 16 week (mouse)					11	3300000	72800000	Mouse
13208559	Wght10_m	weight 10 (mouse)					11	4000000	89000000	Mouse
13208558	Lgth12_m	body length 12 (mouse)					11	4000000	95000000	Mouse
1300905	Scc6_m	colon tumor susceptibility 6 (mouse)			Not determined		11	6930277	89128908	Mouse
1559002	Lmrq4_m	Leishmania major resistance QTL 4 (mouse)			Not determined		11	12318637	69794121	Mouse
1357859	Lvrq7_m	liver weight QTL 7 (mouse)			Not determined		11	12318637	118131898	Mouse
39128214	Lwq20_m	liver weight QTL 20 (mouse)					11	12318637	118131898	Mouse
4141894	Nidd6k_m	Nidd6 on KK-A (mouse)			Not determined			19174204	97007000	Mouse
10412246	Dfs2_m	dental fluorosis suseptibility 2 (mouse)			Not determined		11	21857364	95990405	Mouse
1357782	Char8_m	P. chabaudi malaria resistance QTL 8 (mouse)			Not determined		11	35687789	69794161	Mouse
13208569	Bmiq10_m	body mass index QTL 10 (mouse)					11	36000000	85000000	Mouse
1301328	Mol4_m	modifier of LPS-response 4 (mouse)			Not determined		11	36391750	83590530	Mouse
1301788	Lbw8_m	lupus NZB x NZW 8 (mouse)			Not determined		11	36612460	70618665	Mouse
1301896	Tria1_m	T-cell receptor induced activation 1 (mouse)			Not determined		11	36722738	70723028	Mouse
4141853	Skmw17_m	skeletal muscle weight 17 (mouse)			Not determined		11	37190115	71190238	Mouse
10766457	Nwa3_m	New Zealand White autoimmunity 3 (mouse)					11	38125289	72125383	Mouse
11532698	Sluc36a_m	susceptibility to lung cancer 36a (mouse)					11	42365791	76365904	Mouse
11532699	Sluc36b_m	susceptibility to lung cancer 36b (mouse)					11	42365791	76365904	Mouse
4142300	Ctrq3_m	C. trachomatis resistance QTL 3 (mouse)			Not determined		11	44739211	76963931	Mouse
4141367	Inf1_m	acute ozone induced inflammation (mouse)			Not determined			44739211	113167183	Mouse
4141000	Nidd3_m	non-insulin-dependent diabetes mellitus 3 (mouse)			Not determined			45151201	79151308	Mouse
1302021	Nidd1n_m	non-insulin-dependent diabetes mellitus 1 in NSY (mouse)			Not determined		11	45275046	80087498	Mouse
1357878	Mastr_m	modifier of astrocytoma (mouse)			Not determined		11	45817754	89927907	Mouse
1300765	Bbaa4_m	B.burgdorferi-associated arthritis 4 (mouse)			Not determined		11	46294341	80294436	Mouse
1301988	Bmd11_m	bone mineral density 11 (mouse)			Not determined		11	46428581	80428696	Mouse
1301830	Ssta4_m	susceptibility to Salmonella typhimurium antigens 4 (mouse)			Not determined		11	50187365	84187585	Mouse
13524840	Ppiq9a_m	prepulse inhibition QTL 9a (mouse)					11	52603559	86603559	Mouse
1300774	Pgia7_m	proteoglycan induced arthritis 7 (mouse)			Not determined		11	53499762	87499911	Mouse
4141830	Pregq1_m	pregnancy QTL 1 (mouse)			Not determined		11	54235926	83842826	Mouse
4141875	Etax9_m	ethanol induced ataxia 9 (mouse)			Not determined			55394159	72319101	Mouse
4142121	Tmc1m2_m	Tmc1 modifier 2 (mouse)			Not determined		11	56973201	114267131	Mouse
1300664	Etohcta9_m	ethanol conditioned taste aversion 9 (mouse)			Not determined		11	57863834	91863932	Mouse
10053682	Eae45_m	experimental allergic encephalomyelitis susceptibility 45 (mouse)			Not determined		11	58599729	74863932	Mouse
1300924	Ity2_m	immunity to S. typhimurium 2 (mouse)			Not determined		1	58617204	87804412	Mouse
4141982	Skts-fp2_m	skin tumor susceptibility in FVB and PWK 2 (mouse)			Not determined			58828440	85175703	Mouse
11532697	Sluc36_m	susceptibility to lung cancer 36 (mouse)					11	59365791	69591873	Mouse
1301987	Pid3_m	prior incubation determinant 3 (mouse)			Not determined		11	61795994	88808902	Mouse
1301319	Dautb4_m	dopamine uptake transporter binding 4 (mouse)			Not determined		11	62265179	96265327	Mouse
27226730	Tibmd1_m	tibia midshaft diameter 1, 5 week (mouse)					11	62700000	109500000	Mouse
1301999	Lmr15_m	leishmaniasis resistance 15 (mouse)			Not determined		11	63428581	81939647	Mouse
10044004	Stzid3_m	streptozotocin induced diabetes susceptibility 3 (mouse)			Not determined		11	63428581	94173092	Mouse
11039501	Ltpr6a_m	Leishmania tropica response 6a (mouse)					11	64939510	98939647	Mouse
11039502	Ltpr6b_m	Leishmania tropica response 6b (mouse)					11	64939510	98939647	Mouse
11039515	Ltpr6_m	Leishmania tropica response 6 (mouse)					11	64939510	98939647	Mouse
1301546	Pcir2_m	periosteal circumference 2 (mouse)			Not determined		11	66842594	100842826	Mouse
1357766	Si5lq6_m	serum IGFBP-5 level QTL 6 (mouse)			Not determined		11	66842594	100842826	Mouse
4141012	Femwf6_m	femur work to failure 6 (mouse)			Not determined			66842594	100842826	Mouse
1301833	Tbbmd5_m	total body bone mineral density 5 (mouse)			Not determined		11	66842594	100842826	Mouse
1300784	Prdt3_m	prion disease incubation time 3 (mouse)			Not determined		11	66842594	100842826	Mouse
1300628	Lgth6_m	body length 6 (mouse)			Not determined		11	66842594	100842826	Mouse
4142316	Ity2b_m	immunity to S. typhimurium 2b (mouse)			Not determined		11	67187365	79923086	Mouse
27226783	Tibl5_m	tibia length 5, 5 week (mouse)					11	68300000	102000000	Mouse

miRNA Target Status

Predicted Target Of

	Summary Value
Count of predictions:	1197
Count of miRNA genes:	230
Interacting mature miRNAs:	272
Transcripts:	ENSMUST00000038644, ENSMUST00000132093, ENSMUST00000133099, ENSMUST00000138362, ENSMUST00000143444, ENSMUST00000144271, ENSMUST00000150017, ENSMUST00000156178
Prediction methods:	Miranda, Rnahybrid, Targetscan
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

Expression

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_001285441	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001285442	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001285443	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_021329	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AF243512	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK010288	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AL603662	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BB618250	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BC018290	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BC038470	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BC087921	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BX523534	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BY775054	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CF751505	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CH466601	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	DQ694905	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Reference Sequences

RefSeq Acc Id:

ENSMUST00000038644 ⟹ ENSMUSP00000038485

RefSeq Status:

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm38.p6 Ensembl	11	68,972,484 - 68,973,843 (-)	Ensembl

RefSeq Acc Id:

ENSMUST00000132093

RefSeq Status:

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm38.p6 Ensembl	11	68,972,484 - 68,973,789 (-)	Ensembl

RefSeq Acc Id:

ENSMUST00000133099

RefSeq Status:

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm38.p6 Ensembl	11	68,972,498 - 68,973,196 (-)	Ensembl

RefSeq Acc Id:

ENSMUST00000138362

RefSeq Status:

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm38.p6 Ensembl	11	68,972,484 - 68,973,012 (-)	Ensembl

RefSeq Acc Id:

ENSMUST00000143444

RefSeq Status:

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm38.p6 Ensembl	11	68,972,487 - 68,973,343 (-)	Ensembl

RefSeq Acc Id:

ENSMUST00000144271

RefSeq Status:

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm38.p6 Ensembl	11	68,972,488 - 68,973,445 (-)	Ensembl

RefSeq Acc Id:

ENSMUST00000150017

RefSeq Status:

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm38.p6 Ensembl	11	68,972,484 - 68,975,185 (-)	Ensembl

RefSeq Acc Id:

ENSMUST00000156178

RefSeq Status:

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm38.p6 Ensembl	11	68,972,495 - 68,973,368 (-)	Ensembl

RefSeq Acc Id:

NM_001285441 ⟹ NP_001272370

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39	11	68,863,310 - 68,866,011 (-)	NCBI
GRCm38	11	68,972,484 - 68,975,185 (-)	NCBI
Celera	11	75,915,297 - 75,917,998 (-)	NCBI

Sequence:

show sequence

GTTCAGAGAGAAGCCAGATGCCTACAGTAAGAAGGAGTCACCGCACGCCTTTAATCCCAGCACT
CGGGAGGCAGAGGCAGGCAGAATTTCTGAATTCGACTCCAGCCTGGTCTACAGATGACCTCCGA
CCGGTGCCAGACAACCAAGAAGTTTTCTGCCATCCTGTGACCGACCAGAGTCTGATCATAGAAC
TTCTGGAGCTGCAGGCCCACGTGCAGGGCGAAGCGGCTGCGCGGTACCATTTTGAGGACGTTGG
CCGGGTGCAGGGGGCTAGGGCTGTGCACGTGCTATCTGTGCAGCCTCTCTGTTTGGAGAACTTA
TCCCTGAGAGGCTGCTGTCAGGATGCCTGGTCCCTTTCTGGCAAGCAGCAGGTAGCTAAAGAAA
ACCAGCAGGTAGCAAAGGATGTCACACTGCATCAGGCCTTGCTGCGGCTGCCCCAGTATCAGAC
TGATCTTTTGCTCACCTTCAATCAGCCCCCGTGTCACAGCAGGTCTCTTGGCCCTGAAAATCTG
TCATGTCCACCTTGGAGCCTGAGTAACTTTGAACAGCTGGTAACTAGTTTGACTCTTCATGATC
CCAACCTCTTTGGTCCCCAGTAAAGATCGTTGAGACACAACGTGCTACTGAGGACTCGGGGACC
CAGTTCTGAGAGGGGGAGTTTCTTTCTGCTTCTTCCCTGGATGTAAACATAAGACACTTCCTCT
GCAGAAATAAACTTGCTTTATGAAGAACATAAAAAAAAAAAAAAA

hide sequence

RefSeq Acc Id:

NM_001285442 ⟹ NP_001272371

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39	11	68,863,310 - 68,864,681 (-)	NCBI
GRCm38	11	68,972,484 - 68,973,855 (-)	NCBI
Celera	11	75,915,297 - 75,917,998 (-)	NCBI

Sequence:

show sequence

GATCTTAAAGGTCCCATTGCTTAGTAGGACGGGAGGAGGTAGTGGGTGCTCCGGGAACACCAGG
GGAAATGATGTCTCAAAGGCTCATGTAGGTTTCTTTAAAACCTCGCTAATGTCCAGACTCAAGT
ACTAGATCTATGGAGCCCAACAGAAACTGTCCACTGTTCGGAGGCGCCTTCTCCGCCATCCTCC
CTACAGGGGCCATTGATGTGAGTGACCTCCGACCGGTGCCAGACAACCAAGAAGTTTTCTGCCA
TCCTGTGACCGACCAGAGTCTGATCATAGAACTTCTGGAGCTGCAGGCCCACGTGCAGGGCGAA
GCGGCTGCGCGGTACCATTTTGAGGACGTTGGCCGGGTGCAGGGGGCTAGGGCTGTGCACGTGC
TATCTGTGCAGCCTCTCTGTTTGGAGAACTTATCCCTGAGAGGCTGCTGTCAGGATGCCTGGTC
CCTTTCTGGCAAGCAGCAGGTAGCAAAGGATGTCACACTGCATCAGGCCTTGCTGCGGCTGCCC
CAGTATCAGACTGATCTTTTGCTCACCTTCAATCAGCCCCCGTGTCACAGCAGGTCTCTTGGCC
CTGAAAATCTGTCATGTCCACCTTGGAGCCTGAGTAACTTTGAACAGCTGGTAACTAGTTTGAC
TCTTCATGATCCCAACCTCTTTGGTCCCCAGTAAAGATCGTTGAGACACAACGTGCTACTGAGG
ACTCGGGGACCCAGTTCTGAGAGGGGGAGTTTCTTTCTGCTTCTTCCCTGGATGTAAACATAAG
ACACTTCCTCTGCAGAAATAAACTTGCTTTATGAAGAACATAAAAAAAAAAAAAAA

hide sequence

RefSeq Acc Id:

NM_001285443 ⟹ NP_001272372

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39	11	68,863,310 - 68,864,681 (-)	NCBI
GRCm38	11	68,972,484 - 68,973,855 (-)	NCBI
Celera	11	75,915,297 - 75,917,998 (-)	NCBI

Sequence:

show sequence

GATCTTAAAGGTCCCATTGCTTAGTAGGACGGGAGGAGGTAGTGGGTGCTCCGGGAACACCAGG
GGAAATGATGTCTCAAAGGCTCATGTAGGTTTCTTTAAAACCTCGCTAATGTCCAGACTCAAGT
ACTAGATCTATGGAGCCCAACAGAAACTGTCCACTGTTCGGAGGCGCCTTCTCCGCCATCCTCC
CTACAGGGGCCATTGATGTGAGTGACCTCCGACCGGTGCCAGACAACCAAGAAGTTTTCTGCCA
TCCTGTGACCGACCAGAGTCTGATCATAGAACTTCTGGAGCTGCAGGCCCACGTGCAGGGCGAA
GCGGCTGCGCGGTACCATTTTGAGGACGTTGGCCGGGTGCAGGGGGCTAGGGCTGTGCACGTGC
TATCTGTGCAGCCTCTCTGTTTGGAGAACTTATCCCTGAGAGGCTGCTGTCAGGATGCCTGGTC
CCTTTCTGGCAAGCAGCAGGTAGCTAAAGAAAACCAGCAGGATGTCACACTGCATCAGGCCTTG
CTGCGGCTGCCCCAGTATCAGACTGATCTTTTGCTCACCTTCAATCAGCCCCCGTGTCACAGCA
GGTCTCTTGGCCCTGAAAATCTGTCATGTCCACCTTGGAGCCTGAGTAACTTTGAACAGCTGGT
AACTAGTTTGACTCTTCATGATCCCAACCTCTTTGGTCCCCAGTAAAGATCGTTGAGACACAAC
GTGCTACTGAGGACTCGGGGACCCAGTTCTGAGAGGGGGAGTTTCTTTCTGCTTCTTCCCTGGA
TGTAAACATAAGACACTTCCTCTGCAGAAATAAACTTGCTTTATGAAGAACATAAAAAAAAAAA
AAAA

hide sequence

RefSeq Acc Id:

NM_021329 ⟹ NP_067304

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39	11	68,863,310 - 68,864,681 (-)	NCBI
GRCm38	11	68,972,484 - 68,973,855 (-)	NCBI
MGSCv37	11	68,785,989 - 68,787,322 (-)	RGD
Celera	11	75,915,297 - 75,917,998 (-)	NCBI
cM Map	11		ENTREZGENE

Sequence:

show sequence

GATCTTAAAGGTCCCATTGCTTAGTAGGACGGGAGGAGGTAGTGGGTGCTCCGGGAACACCAGG
GGAAATGATGTCTCAAAGGCTCATGTAGGTTTCTTTAAAACCTCGCTAATGTCCAGACTCAAGT
ACTAGATCTATGGAGCCCAACAGAAACTGTCCACTGTTCGGAGGCGCCTTCTCCGCCATCCTCC
CTACAGGGGCCATTGATGTGAGTGACCTCCGACCGGTGCCAGACAACCAAGAAGTTTTCTGCCA
TCCTGTGACCGACCAGAGTCTGATCATAGAACTTCTGGAGCTGCAGGCCCACGTGCAGGGCGAA
GCGGCTGCGCGGTACCATTTTGAGGACGTTGGCCGGGTGCAGGGGGCTAGGGCTGTGCACGTGC
TATCTGTGCAGCCTCTCTGTTTGGAGAACTTATCCCTGAGAGGCTGCTGTCAGGATGCCTGGTC
CCTTTCTGGCAAGCAGCAGGTAGCTAAAGAAAACCAGCAGGTAGCAAAGGATGTCACACTGCAT
CAGGCCTTGCTGCGGCTGCCCCAGTATCAGACTGATCTTTTGCTCACCTTCAATCAGCCCCCGT
GTCACAGCAGGTCTCTTGGCCCTGAAAATCTGTCATGTCCACCTTGGAGCCTGAGTAACTTTGA
ACAGCTGGTAACTAGTTTGACTCTTCATGATCCCAACCTCTTTGGTCCCCAGTAAAGATCGTTG
AGACACAACGTGCTACTGAGGACTCGGGGACCCAGTTCTGAGAGGGGGAGTTTCTTTCTGCTTC
TTCCCTGGATGTAAACATAAGACACTTCCTCTGCAGAAATAAACTTGCTTTATGAAGAACATAA
AAAAAAAAAAAAA

hide sequence

Protein Sequences


Protein RefSeqs	NP_001272370	(Get FASTA)	NCBI Sequence Viewer
	NP_001272371	(Get FASTA)	NCBI Sequence Viewer
	NP_001272372	(Get FASTA)	NCBI Sequence Viewer
	NP_067304	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	AAF91320	(Get FASTA)	NCBI Sequence Viewer
	AAH18290	(Get FASTA)	NCBI Sequence Viewer
	AAH38470	(Get FASTA)	NCBI Sequence Viewer
	AAH87921	(Get FASTA)	NCBI Sequence Viewer
	BAB26824	(Get FASTA)	NCBI Sequence Viewer
	EDL10465	(Get FASTA)	NCBI Sequence Viewer
	Q9JIB0	(Get FASTA)	NCBI Sequence Viewer

Reference Sequences

RefSeq Acc Id:	NP_067304 ⟸ NM_021329
- Peptide Label:	isoform 2
- UniProtKB:	Q9JIB0 (UniProtKB/Swiss-Prot)
- Sequence:	show sequence MEPNRNCPLFGGAFSAILPTGAIDVSDLRPVPDNQEVFCHPVTDQSLIIELLELQAHVQGEAAA RYHFEDVGRVQGARAVHVLSVQPLCLENLSLRGCCQDAWSLSGKQQVAKENQQVAKDVTLHQAL LRLPQYQTDLLLTFNQPPCHSRSLGPENLSCPPWSLSNFEQLVTSLTLHDPNLFGPQ hide sequence

RefSeq Acc Id:	NP_001272370 ⟸ NM_001285441
- Peptide Label:	isoform 1
- UniProtKB:	Q9JIB0 (UniProtKB/Swiss-Prot)
- Sequence:	show sequence MPTVRRSHRTPLIPALGRQRQAEFLNSTPAWSTDDLRPVPDNQEVFCHPVTDQSLIIELLELQA HVQGEAAARYHFEDVGRVQGARAVHVLSVQPLCLENLSLRGCCQDAWSLSGKQQVAKENQQVAK DVTLHQALLRLPQYQTDLLLTFNQPPCHSRSLGPENLSCPPWSLSNFEQLVTSLTLHDPNLFGP Q hide sequence

RefSeq Acc Id:	NP_001272371 ⟸ NM_001285442
- Peptide Label:	isoform 3
- Sequence:	show sequence MEPNRNCPLFGGAFSAILPTGAIDVSDLRPVPDNQEVFCHPVTDQSLIIELLELQAHVQGEAAA RYHFEDVGRVQGARAVHVLSVQPLCLENLSLRGCCQDAWSLSGKQQVAKDVTLHQALLRLPQYQ TDLLLTFNQPPCHSRSLGPENLSCPPWSLSNFEQLVTSLTLHDPNLFGPQ hide sequence

RefSeq Acc Id:	NP_001272372 ⟸ NM_001285443
- Peptide Label:	isoform 4
- UniProtKB:	Q9JIB0 (UniProtKB/Swiss-Prot)
- Sequence:	show sequence MEPNRNCPLFGGAFSAILPTGAIDVSDLRPVPDNQEVFCHPVTDQSLIIELLELQAHVQGEAAA RYHFEDVGRVQGARAVHVLSVQPLCLENLSLRGCCQDAWSLSGKQQVAKENQQDVTLHQALLRL PQYQTDLLLTFNQPPCHSRSLGPENLSCPPWSLSNFEQLVTSLTLHDPNLFGPQ hide sequence

RefSeq Acc Id:

ENSMUSP00000038485 ⟸ ENSMUST00000038644

Promoters

RGD ID:

6820958

Promoter ID:

MM_KWN:8010

Type:

CpG-Island

SO ACC ID:

SO:0000170

Source:

MPROMDB

Tissues & Cell Lines:

Brain, ES_Cell, Kidney, Lung

Transcripts:

OTTMUST00000013268, OTTMUST00000013269, OTTMUST00000013270, OTTMUST00000013271, OTTMUST00000013272, OTTMUST00000013273, OTTMUST00000013274, XM_001480603_2_GM10355

Position:

Mouse Assembly	Chr	Position (strand)	Source
MGSCv36	11	68,787,036 - 68,787,536 (-)	MPROMDB

RGD ID:

8675130

Promoter ID:

EPDNEW_M15596

Type:

multiple initiation site

Name:

Rangrf_1

Description:

Mus musculus RAN guanine nucleotide release factor , transcriptvariant 1, mRNA.

SO ACC ID:

SO:0000170

Source:

EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)

Experiment Methods:

Single-end sequencing.

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm38	11	68,973,854 - 68,973,914	EPDNEW

Additional Information

External Database Links

Database	Acc Id	Source(s)
AGR Gene	MGI:1889073	AgrOrtholog
Ensembl Genes	ENSMUSG00000032892	Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot
Ensembl Protein	ENSMUSP00000038485	ENTREZGENE, UniProtKB/Swiss-Prot
Ensembl Transcript	ENSMUST00000038644	ENTREZGENE, UniProtKB/Swiss-Prot
	ENSMUST00000150017	ENTREZGENE
Gene3D-CATH	3.40.1000.10	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
InterPro	Mog1	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	Mog1/PsbP_a/b/a-sand	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report	mmu:57785	UniProtKB/Swiss-Prot
MGD	MGI:1889073	ENTREZGENE
NCBI Gene	57785	ENTREZGENE
PANTHER	PTHR15837	UniProtKB/Swiss-Prot
Pfam	Mog1	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen	Rangrf	PhenoGen
Superfamily-SCOP	SSF55724	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt	MOG1_MOUSE	UniProtKB/Swiss-Prot
	Q05D49_MOUSE	UniProtKB/TrEMBL
	Q9JIB0	ENTREZGENE
UniProt Secondary	Q9CWZ0	UniProtKB/Swiss-Prot

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

Imported Disease Annotations - ClinVar

Imported Disease Annotations - CTD