Vmn1r51 (vomeronasal 1 receptor 51) - Rat Genome Database
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Gene: Vmn1r51 (vomeronasal 1 receptor 51) Mus musculus
Analyze
No known orthologs.
Symbol: Vmn1r51
Name: vomeronasal 1 receptor 51
RGD ID: 1556966
MGI Page MGI
Description: Orthologous to human VN1R17P (vomeronasal 1 receptor 17 pseudogene); INTERACTS WITH 1,2-dimethylhydrazine; 2,3,7,8-tetrachlorodibenzodioxine; 4-hydroxyphenyl retinamide.
Type: protein-coding
RefSeq Status: VALIDATED
Also known as: mV1R1; pheromone receptor 1; V1; V1R; V1r1; V1ra1; VN; VN12; vomernasal 1 receptor Vmn1r51; vomeronasal 1 receptor Vmn1r51; vomeronasal 1 receptor, A1; vomeronasal 1, receptor 1; vomeronasal organ family 1, receptor 1; vomeronasal receptor V1RA1; vomeronasal type 1 receptor A1; vomeronasal type-1 receptor 51; vomeronasal type-1 receptor A1; vomeronasal type-1 receptor A8
RGD Orthologs
Alliance Genes
More Info homologs ...
Latest Assembly: GRCm38 - Mouse Genome Assembly GRCm38
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39690,099,625 - 90,107,627 (+)NCBIGRCm39mm39
GRCm39 Ensembl690,099,578 - 90,109,246 (+)Ensembl
GRCm38690,122,643 - 90,130,645 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl690,122,596 - 90,132,264 (+)EnsemblGRCm38mm10GRCm38
MGSCv37690,072,637 - 90,080,639 (+)NCBIGRCm37mm9NCBIm37
MGSCv36690,090,166 - 90,096,494 (+)NCBImm8
Celera692,016,769 - 92,024,771 (+)NCBICelera
Cytogenetic Map6D1NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Function

Phenotype Annotations     Click to see Annotation Detail View

Mammalian Phenotype
References

Additional References at PubMed
PMID:9757043   PMID:10219242   PMID:11116090   PMID:11222144   PMID:11752409   PMID:12214233   PMID:12477932   PMID:16731509   PMID:16817859   PMID:19906969   PMID:19952141   PMID:20003482  
PMID:21267068   PMID:21873635   PMID:23637329  


Genomics

Position Markers
UniSTS:494013  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38690,129,105 - 90,130,238UniSTSGRCm38
GRCm38689,844,518 - 89,845,615UniSTSGRCm38
MGSCv37690,079,099 - 90,080,232UniSTSGRCm37
MGSCv37689,794,512 - 89,795,609UniSTSGRCm37
Celera691,752,478 - 91,753,575UniSTS
Celera692,023,231 - 92,024,364UniSTS
Cytogenetic Map6D1UniSTS


QTLs in Region (GRCm38)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
25440480Moaq2_mmodifier of alien QTL 2 (mouse)61117500000Mouse
26884414Bzwq12_mbi-zygomatic width QTL 12, 16 week (mouse)63400000139100000Mouse
4142126W3q3_mweight 3 weeks QTL 3 (mouse)Not determined450382396656149Mouse
4142361W10q11_mweight 10 weeks QTL 11 (mouse)Not determined450382396656149Mouse
4142271Egq8_mearly growth QTL 8 (mouse)Not determined450382396656149Mouse
4142232W6q4_mweight 6 weeks QTL 4 (mouse)Not determined450382396656149Mouse
1558984Cplaq9_mcircadian period of locomotor activity 9 (mouse)Not determined63866962592607450Mouse
10412157Fl1n_mfatty liver 1 in NSY (mouse)Not determined645314059128835032Mouse
4142259Tabw2_mtally ho associated body weight 2 (mouse)Not determined46935985136423692Mouse
25314319Histh6_mhistamine hypersensitivity 6 (mouse)648720000125360000Mouse
25314320Histh5_mhistamine hypersensitivity 5 (mouse)648720000148450000Mouse
1301962Eila2_methanol induced locomotor activity 2 (mouse)Not determined648726556125356785Mouse
1357683Igf1sl1_mIGF-1 serum levels 1 (mouse)Not determined652161713116155267Mouse
15039373Adip28_madiposity 28 (mouse)65630821190308211Mouse
15039375Bw41_mbody weight QTL 41 (mouse)65630821190308211Mouse
1558977Skmw10_mskeletal muscle weight 10 (mouse)Not determined65844758392447710Mouse
10043972Obq28_mobesity QTL 28 (mouse)Not determined65854043392540433Mouse
1301740Bwq2_mbody weight QTL 2 (mouse)Not determined66005768094057799Mouse
1301369Im4_mimmunoregulatory 4 (mouse)Not determined66348473897484905Mouse
1300650Bw18_mbody weight QTL 18 (mouse)Not determined666713869100714031Mouse
1301876Bits2_mbitterness sensitivity 2 (mouse)Not determined670425898104426034Mouse
1301813Skl3_mskeletal size (tail length) 3 (mouse)Not determined670425898104426034Mouse
1301034Egrm2_mearly growth rate (mouse)Not determined670425898104426034Mouse
1302020Bbaa20_mB.burgdorferi-associated arthritis 20 (mouse)Not determined67132262193464093Mouse
1300869Stheal5_msoft tissue heal 5 (mouse)Not determined671575060105575178Mouse
1300954Fcsa1_mfemoral cross-sectional area 1 (mouse)Not determined671981024105981170Mouse
1301521Pas1c_mpulmonary adenoma susceptibility 1c (mouse)Not determined671981024105981170Mouse
13506930Recrq9_mrecombination rate in male meiosis QTL 9 (mouse)673500000134700000Mouse
1301320Ots1_movarian teratoma susceptibility 1 (mouse)Not determined675447583104503555Mouse
1301571Arrd1_mage-related retinal degeneration 1 (mouse)Not determined67554435692607450Mouse
1300674Nidd3n_mnon-insulin-dependent diabetes mellitus 3 in NSY (mouse)Not determined67554435694225955Mouse
10412195Efw_mepididymal fat weight (mouse)Not determined67554435694225955Mouse
10043901Pfat5_mpredicted fat percentage 5 (mouse)Not determined675607306109607450Mouse
10412208Cypr4_mcytokine production 4 (mouse)Not determined675716503109716697Mouse
1357875Pfat2_mpredicted fat percentage 2 (mouse)Not determined676463949110464093Mouse
13824985Alh1_mamplitude of lateral head displacement 1 (mouse)67800000097000000Mouse
4141376Dbm1_mdiabetes modifier 1 (mouse)Not determined678629504121115387Mouse
14696731Pairq1_mP. aeruginosa infection resistance QTL 1 (mouse)681500000102200000Mouse
10043864T2dm4sa_mtype 2 diabetes mellitus 4 in SMXA RI mice (mouse)Not determined683713869147052561Mouse
11251720Ewc4_methanol withdrawal and consumption 4 (mouse)684122513118122513Mouse
1301687Mnic2_mmacronutrient intake (mouse)Not determined686806805113544602Mouse
1301744Hdlq11_mHDL QTL 11 (mouse)Not determined687503360121503555Mouse
1301262Gasa3_mgastritis type A susceptibility locus 3 (mouse)Not determined689005405123005603Mouse

miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:660
Count of miRNA genes:318
Interacting mature miRNAs:366
Transcripts:ENSMUST00000072859, ENSMUST00000174204
Prediction methods:Microtar, Miranda
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts NM_011683 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AB062897 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AC123549 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AC165969 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AF129005 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AF291481 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC046308 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BY430696 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH466523 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JF782602 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JF782603 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JF782604 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JF782605 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JF782606 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JF782607 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JF782608 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JF782609 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JF782610 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JF782611 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JF782612 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JF782613 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JF782614 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JF782615 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JF782616 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JF782617 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JF782618 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JF782619 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JF782620 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JF782621 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JF782622 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JF782623 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JF782624 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JF782625 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JF782626 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JF782627 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JF782628 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JF782629 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  Y12725 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: ENSMUST00000072859   ⟹   ENSMUSP00000072637
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl690,128,424 - 90,130,990 (+)Ensembl
RefSeq Acc Id: ENSMUST00000174204   ⟹   ENSMUSP00000133870
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl690,122,596 - 90,132,264 (+)Ensembl
RefSeq Acc Id: ENSMUST00000226542   ⟹   ENSMUSP00000153862
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl690,122,596 - 90,132,264 (+)Ensembl
RefSeq Acc Id: ENSMUST00000226977   ⟹   ENSMUSP00000153783
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl690,122,596 - 90,132,264 (+)Ensembl
RefSeq Acc Id: ENSMUST00000227109   ⟹   ENSMUSP00000153842
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl690,122,596 - 90,132,264 (+)Ensembl
RefSeq Acc Id: ENSMUST00000227145
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl690,122,596 - 90,132,264 (+)Ensembl
RefSeq Acc Id: ENSMUST00000227766   ⟹   ENSMUSP00000153813
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl690,122,596 - 90,132,264 (+)Ensembl
RefSeq Acc Id: ENSMUST00000227876   ⟹   ENSMUSP00000154223
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl690,122,596 - 90,132,264 (+)Ensembl
RefSeq Acc Id: ENSMUST00000227911   ⟹   ENSMUSP00000154582
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl690,122,596 - 90,132,264 (+)Ensembl
RefSeq Acc Id: ENSMUST00000227988
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl690,122,596 - 90,132,264 (+)Ensembl
RefSeq Acc Id: ENSMUST00000228433
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl690,122,596 - 90,132,264 (+)Ensembl
RefSeq Acc Id: ENSMUST00000228590
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl690,122,596 - 90,132,264 (+)Ensembl
RefSeq Acc Id: ENSMUST00000228880   ⟹   ENSMUSP00000154676
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl690,122,596 - 90,132,264 (+)Ensembl
RefSeq Acc Id: NM_011683   ⟹   NP_035813
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39690,099,625 - 90,107,627 (+)NCBI
GRCm38690,122,643 - 90,130,645 (+)ENTREZGENE
MGSCv37690,072,637 - 90,080,639 (+)RGD
Celera692,016,769 - 92,024,771 (+)RGD
cM Map6 ENTREZGENE
Sequence:
Protein Sequences
Protein RefSeqs NP_035813 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein AAG42075 (Get FASTA)   NCBI Sequence Viewer  
  AAG43249 (Get FASTA)   NCBI Sequence Viewer  
  AAH46308 (Get FASTA)   NCBI Sequence Viewer  
  AEE99761 (Get FASTA)   NCBI Sequence Viewer  
  AEE99762 (Get FASTA)   NCBI Sequence Viewer  
  AEE99763 (Get FASTA)   NCBI Sequence Viewer  
  AEE99764 (Get FASTA)   NCBI Sequence Viewer  
  AEE99765 (Get FASTA)   NCBI Sequence Viewer  
  AEE99766 (Get FASTA)   NCBI Sequence Viewer  
  AEE99767 (Get FASTA)   NCBI Sequence Viewer  
  AEE99768 (Get FASTA)   NCBI Sequence Viewer  
  AEE99769 (Get FASTA)   NCBI Sequence Viewer  
  AEE99770 (Get FASTA)   NCBI Sequence Viewer  
  AEE99771 (Get FASTA)   NCBI Sequence Viewer  
  AEE99772 (Get FASTA)   NCBI Sequence Viewer  
  AEE99773 (Get FASTA)   NCBI Sequence Viewer  
  AEE99774 (Get FASTA)   NCBI Sequence Viewer  
  AEE99775 (Get FASTA)   NCBI Sequence Viewer  
  AEE99776 (Get FASTA)   NCBI Sequence Viewer  
  AEE99777 (Get FASTA)   NCBI Sequence Viewer  
  AEE99778 (Get FASTA)   NCBI Sequence Viewer  
  AEE99779 (Get FASTA)   NCBI Sequence Viewer  
  AEE99780 (Get FASTA)   NCBI Sequence Viewer  
  AEE99781 (Get FASTA)   NCBI Sequence Viewer  
  AEE99782 (Get FASTA)   NCBI Sequence Viewer  
  AEE99783 (Get FASTA)   NCBI Sequence Viewer  
  AEE99784 (Get FASTA)   NCBI Sequence Viewer  
  AEE99785 (Get FASTA)   NCBI Sequence Viewer  
  AEE99786 (Get FASTA)   NCBI Sequence Viewer  
  AEE99787 (Get FASTA)   NCBI Sequence Viewer  
  AEE99788 (Get FASTA)   NCBI Sequence Viewer  
  BAB79215 (Get FASTA)   NCBI Sequence Viewer  
  CAA73257 (Get FASTA)   NCBI Sequence Viewer  
  EDK99277 (Get FASTA)   NCBI Sequence Viewer  
  Q8VIC6 (Get FASTA)   NCBI Sequence Viewer  
Reference Sequences
RefSeq Acc Id: NP_035813   ⟸   NM_011683
- UniProtKB: Q8VIC6 (UniProtKB/Swiss-Prot),   Q78GE8 (UniProtKB/TrEMBL),   A0A0R4J266 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: ENSMUSP00000072637   ⟸   ENSMUST00000072859
RefSeq Acc Id: ENSMUSP00000133870   ⟸   ENSMUST00000174204
RefSeq Acc Id: ENSMUSP00000154223   ⟸   ENSMUST00000227876
RefSeq Acc Id: ENSMUSP00000154582   ⟸   ENSMUST00000227911
RefSeq Acc Id: ENSMUSP00000153813   ⟸   ENSMUST00000227766
RefSeq Acc Id: ENSMUSP00000153842   ⟸   ENSMUST00000227109
RefSeq Acc Id: ENSMUSP00000153862   ⟸   ENSMUST00000226542
RefSeq Acc Id: ENSMUSP00000153783   ⟸   ENSMUST00000226977
RefSeq Acc Id: ENSMUSP00000154676   ⟸   ENSMUST00000228880
Protein Domains
G_PROTEIN_RECEP_F1_2


Additional Information

Database Acc Id Source(s)
AGR Gene MGI:1333759 AgrOrtholog
Ensembl Genes ENSMUSG00000062818 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Protein ENSMUSP00000072637 UniProtKB/TrEMBL
  ENSMUSP00000133870 ENTREZGENE, UniProtKB/TrEMBL
  ENSMUSP00000153783 UniProtKB/TrEMBL
  ENSMUSP00000153813 UniProtKB/TrEMBL
  ENSMUSP00000153842 UniProtKB/TrEMBL
  ENSMUSP00000153862 UniProtKB/TrEMBL
  ENSMUSP00000154223 UniProtKB/TrEMBL
  ENSMUSP00000154582 UniProtKB/TrEMBL
  ENSMUSP00000154676 UniProtKB/TrEMBL
Ensembl Transcript ENSMUST00000072859 UniProtKB/TrEMBL
  ENSMUST00000174204 ENTREZGENE, UniProtKB/TrEMBL
  ENSMUST00000226542 UniProtKB/TrEMBL
  ENSMUST00000226977 UniProtKB/TrEMBL
  ENSMUST00000227109 UniProtKB/TrEMBL
  ENSMUST00000227766 UniProtKB/TrEMBL
  ENSMUST00000227876 UniProtKB/TrEMBL
  ENSMUST00000227911 UniProtKB/TrEMBL
  ENSMUST00000228880 UniProtKB/TrEMBL
InterPro GPCR_Rhodpsn_7TM UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Vmron_rcpt_1 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report mmu:22296 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
MGD MGI:1333759 ENTREZGENE
NCBI Gene 22296 ENTREZGENE
PANTHER PTHR24062 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam V1R UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen Vmn1r51 PhenoGen
PRINTS VOMERONASL1R UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PROSITE G_PROTEIN_RECEP_F1_2 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt A0A0R4J266 ENTREZGENE, UniProtKB/TrEMBL
  Q78GE8 ENTREZGENE, UniProtKB/TrEMBL
  Q8VIC6 ENTREZGENE, UniProtKB/Swiss-Prot
UniProt Secondary Q9EPA4 UniProtKB/Swiss-Prot
  Q9Z195 UniProtKB/Swiss-Prot


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2011-07-27 Vmn1r51  vomeronasal 1 receptor 51  V1ra1  vomeronasal 1 receptor, A1  Symbol and/or name change 5135510 APPROVED