Leo1 (Mus musculus - house mouse) |
Mouse Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
---|
GRCm39 | 9 | 75,348,072 - 75,373,714 (+) | NCBI | GRCm39 | GRCm39 | mm39 | | GRCm39 Ensembl | 9 | 75,348,806 - 75,373,714 (+) | Ensembl | | GRCm39 Ensembl | | | GRCm38 | 9 | 75,441,015 - 75,466,432 (+) | NCBI | GRCm38 | GRCm38 | mm10 | GRCm38 | GRCm38.p6 Ensembl | 9 | 75,441,524 - 75,466,432 (+) | Ensembl | GRCm38 | | mm10 | GRCm38 | MGSCv37 | 9 | 75,289,331 - 75,314,239 (+) | NCBI | GRCm37 | MGSCv37 | mm9 | NCBIm37 | MGSCv36 | 9 | 75,227,433 - 75,252,341 (+) | NCBI | | MGSCv36 | mm8 | | Celera | 9 | 72,601,044 - 72,627,947 (+) | NCBI | | Celera | | | Cytogenetic Map | 9 | D | NCBI | | | | | cM Map | 9 | 42.3 | NCBI | | | | |
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LEO1 (Homo sapiens - human) |
Human Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
GRCh38 | 15 | 51,938,025 - 51,971,778 (-) | NCBI | GRCh38 | GRCh38 | hg38 | GRCh38 | GRCh38.p14 Ensembl | 15 | 51,938,025 - 51,971,778 (-) | Ensembl | GRCh38 | | hg38 | GRCh38 | GRCh37 | 15 | 52,230,222 - 52,263,975 (-) | NCBI | GRCh37 | GRCh37 | hg19 | GRCh37 | Build 36 | 15 | 50,017,514 - 50,051,250 (-) | NCBI | NCBI36 | Build 36 | hg18 | NCBI36 | Celera | 15 | 29,123,636 - 29,157,376 (-) | NCBI | | Celera | | | Cytogenetic Map | 15 | q21.2 | NCBI | | | | | HuRef | 15 | 29,060,926 - 29,094,625 (-) | NCBI | | HuRef | | | CHM1_1 | 15 | 52,348,273 - 52,382,009 (-) | NCBI | | CHM1_1 | | | T2T-CHM13v2.0 | 15 | 49,745,644 - 49,779,416 (-) | NCBI | | T2T-CHM13v2.0 | | |
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Leo1 (Rattus norvegicus - Norway rat) |
Rat Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
GRCr8 | 8 | 85,080,036 - 85,104,471 (+) | NCBI | | GRCr8 | | | mRatBN7.2 | 8 | 76,199,547 - 76,223,983 (+) | NCBI | mRatBN7.2 | mRatBN7.2 | | | mRatBN7.2 Ensembl | 8 | 76,199,099 - 76,223,983 (+) | Ensembl | | mRatBN7.2 Ensembl | | | UTH_Rnor_SHR_Utx | 8 | 81,707,258 - 81,731,486 (+) | NCBI | Rnor_SHR | UTH_Rnor_SHR_Utx | | | UTH_Rnor_SHRSP_BbbUtx_1.0 | 8 | 79,972,106 - 79,996,459 (+) | NCBI | Rnor_SHRSP | UTH_Rnor_SHRSP_BbbUtx_1.0 | | | UTH_Rnor_WKY_Bbb_1.0 | 8 | 77,806,592 - 77,830,820 (+) | NCBI | Rnor_WKY | UTH_Rnor_WKY_Bbb_1.0 | | | Rnor_6.0 | 8 | 82,380,906 - 82,405,293 (+) | NCBI | Rnor6.0 | Rnor_6.0 | rn6 | Rnor6.0 | Rnor_6.0 Ensembl | 8 | 82,380,757 - 82,405,644 (+) | Ensembl | Rnor6.0 | | rn6 | Rnor6.0 | Rnor_5.0 | 8 | 81,983,993 - 82,008,379 (+) | NCBI | Rnor5.0 | Rnor_5.0 | rn5 | Rnor5.0 | RGSC_v3.4 | 8 | 80,266,160 - 80,290,547 (+) | NCBI | RGSC3.4 | RGSC_v3.4 | rn4 | RGSC3.4 | Celera | 8 | 75,989,197 - 76,013,584 (+) | NCBI | | Celera | | | Cytogenetic Map | 8 | q24 | NCBI | | | | |
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Leo1 (Chinchilla lanigera - long-tailed chinchilla) |
Chinchilla Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
ChiLan1.0 Ensembl | NW_004955409 | 2,711,564 - 2,727,755 (+) | Ensembl | ChiLan1.0 | | | | ChiLan1.0 | NW_004955409 | 2,711,475 - 2,727,879 (+) | NCBI | ChiLan1.0 | ChiLan1.0 | | |
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LEO1 (Pan paniscus - bonobo/pygmy chimpanzee) |
Bonobo Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
NHGRI_mPanPan1-v2 | 16 | 41,174,737 - 41,208,587 (-) | NCBI | | NHGRI_mPanPan1-v2 | | | NHGRI_mPanPan1 | 15 | 45,355,217 - 45,389,066 (-) | NCBI | | NHGRI_mPanPan1 | | | Mhudiblu_PPA_v0 | 15 | 30,879,431 - 30,913,361 (-) | NCBI | Mhudiblu_PPA_v0 | Mhudiblu_PPA_v0 | panPan3 | | PanPan1.1 | 15 | 49,208,132 - 49,241,054 (-) | NCBI | panpan1.1 | PanPan1.1 | panPan2 | | PanPan1.1 Ensembl | 15 | 49,208,132 - 49,241,055 (-) | Ensembl | panpan1.1 | | panPan2 | |
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LEO1 (Canis lupus familiaris - dog) |
Dog Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
CanFam3.1 | 30 | 17,614,502 - 17,651,715 (-) | NCBI | CanFam3.1 | CanFam3.1 | canFam3 | CanFam3.1 | CanFam3.1 Ensembl | 30 | 17,598,076 - 17,651,290 (-) | Ensembl | CanFam3.1 | | canFam3 | CanFam3.1 | Dog10K_Boxer_Tasha | 30 | 17,541,113 - 17,578,528 (-) | NCBI | | Dog10K_Boxer_Tasha | | | ROS_Cfam_1.0 | 30 | 17,760,917 - 17,798,265 (-) | NCBI | | ROS_Cfam_1.0 | | | ROS_Cfam_1.0 Ensembl | 30 | 17,744,183 - 17,799,470 (-) | Ensembl | | ROS_Cfam_1.0 Ensembl | | | UMICH_Zoey_3.1 | 30 | 17,682,358 - 17,719,762 (-) | NCBI | | UMICH_Zoey_3.1 | | | UNSW_CanFamBas_1.0 | 30 | 17,800,296 - 17,837,557 (-) | NCBI | | UNSW_CanFamBas_1.0 | | | UU_Cfam_GSD_1.0 | 30 | 17,906,850 - 17,943,999 (-) | NCBI | | UU_Cfam_GSD_1.0 | | |
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Leo1 (Ictidomys tridecemlineatus - thirteen-lined ground squirrel) |
Squirrel Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
HiC_Itri_2 | NW_024408640 | 95,904,998 - 95,935,951 (-) | NCBI | | HiC_Itri_2 | | | SpeTri2.0 Ensembl | NW_004936471 | 13,753,030 - 13,784,049 (-) | Ensembl | SpeTri2.0 | SpeTri2.0 Ensembl | | | SpeTri2.0 | NW_004936471 | 13,753,061 - 13,783,990 (-) | NCBI | SpeTri2.0 | SpeTri2.0 | | SpeTri2.0 |
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LEO1 (Sus scrofa - pig) |
Pig Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
Sscrofa11.1 Ensembl | 1 | 119,805,006 - 119,859,434 (+) | Ensembl | Sscrofa11.1 | | susScr11 | Sscrofa11.1 | Sscrofa11.1 | 1 | 119,804,992 - 119,842,343 (+) | NCBI | Sscrofa11.1 | Sscrofa11.1 | susScr11 | Sscrofa11.1 | Sscrofa10.2 | 1 | 132,895,440 - 132,932,785 (+) | NCBI | Sscrofa10.2 | Sscrofa10.2 | susScr3 | |
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LEO1 (Chlorocebus sabaeus - green monkey) |
Green Monkey Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
ChlSab1.1 | 26 | 31,405,019 - 31,444,350 (+) | NCBI | ChlSab1.1 | ChlSab1.1 | chlSab2 | | ChlSab1.1 Ensembl | 26 | 31,404,537 - 31,445,198 (+) | Ensembl | ChlSab1.1 | ChlSab1.1 Ensembl | chlSab2 | | Vero_WHO_p1.0 | NW_023666048 | 109,782,132 - 109,821,268 (-) | NCBI | Vero_WHO_p1.0 | Vero_WHO_p1.0 | | |
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Leo1 (Heterocephalus glaber - naked mole-rat) |
|